Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475971

Identifier: 186475971

GI number: 186475971

Start: 1362390

End: 1363904

Strand: Direct

Name: 186475971

Synonym: Bphy_1211

Alternate gene names: NA

Gene position: 1362390-1363904 (Clockwise)

Preceding gene: 186475970

Following gene: 186475972

Centisome position: 39.16

GC content: 63.76

Gene sequence:

>1515_bases
GTGCTGCGCTCATCGCTTGTCTCCCGCACCGTGATCGGTGCCGTCGCCTCGCTTGCGGCACTCGCCGCAGTTCCCGCCGC
TCACGCAACTGTCGAACTGATCGCGATCGGCAAACTCGACGGCAATCTGTCCGACAGGTCGAAAGAGACGGCAGGCACGC
TCGAAAACGGTGTGCCCGGCAATCTGCTTGGCGGCCTTGGCTCCGGCATCGGCTATGCGGGCTGCCATACGTTTGTCGCC
GTGCCCGATCGCGGCCCGAACGCGGTCTCGTACAACAAGGCGATCGACGACACGGCGTCGTACATCAACCGCTTCCACAC
GCTGCGCCTGCGTCTGAAGGACGCGCCGAAGGGTTCGGCGTTGCCGTTCACGCTAACGCCGAAGCTGATCGACACGACGC
TGCTGCATACGTCGGATCGCCTCGTGTACGGCTCCGGCTCGGCGTATAACGTGCCGAACGGCGCACCGAAGCTCAACCGC
GACAACCACACGAATTACTTCACGGGCCGCTCGGACAACTTCGATCCGACGCATCTGTCGACCTCTACCCTCGATGCCCG
CTTCGATCCCGAAAGCATCCGGGTCGCGAACGACGGCGACAGCGTGTTCATCTCCGACGAATACGGCCCGTACGTCTATC
GCTTCGGCCGCAAGAGCGGCCGCCGCATCGCGACGTACAAGCTGCCCGACACGTTCGCCGTCGCCACGCTCTCGCCCGCC
GGCGACACGGAGATCAGCGTCAACACGTCGGGCCGCGTCGCGAACAAGGGCATGGAAGGCCTCGCCATCTCGCCCGACGG
CACGACGCTGTTCGGCGCGATGCAGAGTCCGCTGATTCAGGACGGCGGCACGAATGCGCGATACACGCGCATCGTGAAGA
TCGACCTCCGCACGGGCCGTACGACGCAATACGCGTATGCGCTGACGAACATCGGCTCGGCATCGAAGCCGAAGTATCCG
ACCGTCAGCGATGTGCTCGCGATCAACGATCATGAACTGCTCGTCGACGAGCGCGATGGCAAGGGGCTGGGCGACAATTC
GACGGCAGTGTTCAAGCAGCTCAACCGCATCGACCTGACGGGCGCGCAGGACGTTGGCCAGGCGAGCGGCGAAAGCGGAC
TCGCGCCGTTCGCGGTGAAGAAAACGCTGTTCCTCGATATCGTGGCCGCGTTGACGGCCAACGGCTACAGCGCGAACGAC
ATTCCCGCGAAGATCGAAGGCATCGCGTTCGGTCCGGACGTGACGCTGAACGGCGTGAGGAAGCACACTCTCTATGTCGC
GAACGACAACGACTTCATCGGCAACGTAACCGACACGAGCCATCCGTCGGGCATCGCGAACCCGAACCTGTTCTTCGTGT
TCGCGATCGACGCCTCCGATCTGCCCGACTATGTCGCGCAGCGTCTGCCGGGCGTGTCGAAGAACGACCGCGAGTACGAT
CACGACAGCGTGTGCGGCCGCGGCGATGACGACGATCAGGATCATGACCACGAGCGCGACGATCACGGTCACTGA

Upstream 100 bases:

>100_bases
CCCTGAAAGAAACCTCGTCCGGTCGTTTGCCGCCTTCCCGCTTCTGCCGCGCGCGCCCGGCGCCACCCTCATCGCGTTGC
TCCTTTCAAGGATCCCTTCC

Downstream 100 bases:

>100_bases
TCGCGCGCACTGAGTTGCAGCGTCCCTGACGGACGTTGTAACGGGCCGGCCCGGCACGCTGCGGGCCGGCTTCTTTTTTC
CTGTCGCCCACGCCACTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MLRSSLVSRTVIGAVASLAALAAVPAAHATVELIAIGKLDGNLSDRSKETAGTLENGVPGNLLGGLGSGIGYAGCHTFVA
VPDRGPNAVSYNKAIDDTASYINRFHTLRLRLKDAPKGSALPFTLTPKLIDTTLLHTSDRLVYGSGSAYNVPNGAPKLNR
DNHTNYFTGRSDNFDPTHLSTSTLDARFDPESIRVANDGDSVFISDEYGPYVYRFGRKSGRRIATYKLPDTFAVATLSPA
GDTEISVNTSGRVANKGMEGLAISPDGTTLFGAMQSPLIQDGGTNARYTRIVKIDLRTGRTTQYAYALTNIGSASKPKYP
TVSDVLAINDHELLVDERDGKGLGDNSTAVFKQLNRIDLTGAQDVGQASGESGLAPFAVKKTLFLDIVAALTANGYSAND
IPAKIEGIAFGPDVTLNGVRKHTLYVANDNDFIGNVTDTSHPSGIANPNLFFVFAIDASDLPDYVAQRLPGVSKNDREYD
HDSVCGRGDDDDQDHDHERDDHGH

Sequences:

>Translated_504_residues
MLRSSLVSRTVIGAVASLAALAAVPAAHATVELIAIGKLDGNLSDRSKETAGTLENGVPGNLLGGLGSGIGYAGCHTFVA
VPDRGPNAVSYNKAIDDTASYINRFHTLRLRLKDAPKGSALPFTLTPKLIDTTLLHTSDRLVYGSGSAYNVPNGAPKLNR
DNHTNYFTGRSDNFDPTHLSTSTLDARFDPESIRVANDGDSVFISDEYGPYVYRFGRKSGRRIATYKLPDTFAVATLSPA
GDTEISVNTSGRVANKGMEGLAISPDGTTLFGAMQSPLIQDGGTNARYTRIVKIDLRTGRTTQYAYALTNIGSASKPKYP
TVSDVLAINDHELLVDERDGKGLGDNSTAVFKQLNRIDLTGAQDVGQASGESGLAPFAVKKTLFLDIVAALTANGYSAND
IPAKIEGIAFGPDVTLNGVRKHTLYVANDNDFIGNVTDTSHPSGIANPNLFFVFAIDASDLPDYVAQRLPGVSKNDREYD
HDSVCGRGDDDDQDHDHERDDHGH
>Mature_504_residues
MLRSSLVSRTVIGAVASLAALAAVPAAHATVELIAIGKLDGNLSDRSKETAGTLENGVPGNLLGGLGSGIGYAGCHTFVA
VPDRGPNAVSYNKAIDDTASYINRFHTLRLRLKDAPKGSALPFTLTPKLIDTTLLHTSDRLVYGSGSAYNVPNGAPKLNR
DNHTNYFTGRSDNFDPTHLSTSTLDARFDPESIRVANDGDSVFISDEYGPYVYRFGRKSGRRIATYKLPDTFAVATLSPA
GDTEISVNTSGRVANKGMEGLAISPDGTTLFGAMQSPLIQDGGTNARYTRIVKIDLRTGRTTQYAYALTNIGSASKPKYP
TVSDVLAINDHELLVDERDGKGLGDNSTAVFKQLNRIDLTGAQDVGQASGESGLAPFAVKKTLFLDIVAALTANGYSAND
IPAKIEGIAFGPDVTLNGVRKHTLYVANDNDFIGNVTDTSHPSGIANPNLFFVFAIDASDLPDYVAQRLPGVSKNDREYD
HDSVCGRGDDDDQDHDHERDDHGH

Specific function: Unknown

COG id: COG4222

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53733; Mature: 53733

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSSLVSRTVIGAVASLAALAAVPAAHATVELIAIGKLDGNLSDRSKETAGTLENGVPG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHCHHCCCCCC
NLLGGLGSGIGYAGCHTFVAVPDRGPNAVSYNKAIDDTASYINRFHTLRLRLKDAPKGSA
HHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHEEEEEEEEECCCCCCC
LPFTLTPKLIDTTLLHTSDRLVYGSGSAYNVPNGAPKLNRDNHTNYFTGRSDNFDPTHLS
CCEEECHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
TSTLDARFDPESIRVANDGDSVFISDEYGPYVYRFGRKSGRRIATYKLPDTFAVATLSPA
CCCCCCEECCCCEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCC
GDTEISVNTSGRVANKGMEGLAISPDGTTLFGAMQSPLIQDGGTNARYTRIVKIDLRTGR
CCCEEEEECCCCCCCCCCCCEEECCCCCEEEHHHCCCEECCCCCCCEEEEEEEEEECCCC
TTQYAYALTNIGSASKPKYPTVSDVLAINDHELLVDERDGKGLGDNSTAVFKQLNRIDLT
CEEEEEEEECCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHEECC
GAQDVGQASGESGLAPFAVKKTLFLDIVAALTANGYSANDIPAKIEGIAFGPDVTLNGVR
CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCEE
KHTLYVANDNDFIGNVTDTSHPSGIANPNLFFVFAIDASDLPDYVAQRLPGVSKNDREYD
EEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCC
HDSVCGRGDDDDQDHDHERDDHGH
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRSSLVSRTVIGAVASLAALAAVPAAHATVELIAIGKLDGNLSDRSKETAGTLENGVPG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHCHHCCCCCC
NLLGGLGSGIGYAGCHTFVAVPDRGPNAVSYNKAIDDTASYINRFHTLRLRLKDAPKGSA
HHHHHHCCCCCCCCCEEEEEECCCCCCCEECCCHHHHHHHHHHHEEEEEEEEECCCCCCC
LPFTLTPKLIDTTLLHTSDRLVYGSGSAYNVPNGAPKLNRDNHTNYFTGRSDNFDPTHLS
CCEEECHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
TSTLDARFDPESIRVANDGDSVFISDEYGPYVYRFGRKSGRRIATYKLPDTFAVATLSPA
CCCCCCEECCCCEEEECCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCC
GDTEISVNTSGRVANKGMEGLAISPDGTTLFGAMQSPLIQDGGTNARYTRIVKIDLRTGR
CCCEEEEECCCCCCCCCCCCEEECCCCCEEEHHHCCCEECCCCCCCEEEEEEEEEECCCC
TTQYAYALTNIGSASKPKYPTVSDVLAINDHELLVDERDGKGLGDNSTAVFKQLNRIDLT
CEEEEEEEECCCCCCCCCCCCHHHEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHEECC
GAQDVGQASGESGLAPFAVKKTLFLDIVAALTANGYSANDIPAKIEGIAFGPDVTLNGVR
CCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEECCEE
KHTLYVANDNDFIGNVTDTSHPSGIANPNLFFVFAIDASDLPDYVAQRLPGVSKNDREYD
EEEEEEECCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCC
HDSVCGRGDDDDQDHDHERDDHGH
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA