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The map label for this gene is yfdC [H]

Identifier: 186475970

GI number: 186475970

Start: 1361207

End: 1362115

Strand: Direct

Name: yfdC [H]

Synonym: Bphy_1210

Alternate gene names: 186475970

Gene position: 1361207-1362115 (Clockwise)

Preceding gene: 186475967

Following gene: 186475971

Centisome position: 39.12

GC content: 63.04

Gene sequence:

>909_bases
ATGACGAACGAAATCTCCCGCCGCGAATACCATTTCGAAGCGACCGATTGCGCCGAATCTGACGATCATCCGGAGAAAGC
GGGCGCGGAATCACCCCATCTCGACGAAGGCGAAAAAGATCAGGCCGCACAACACACGGCGCCGCACGCGCTGATGCTGC
ATGAGATCGTGCGGGAAGAAGGCGAAGCGGCGCTCGGGCGCACCGTGATGGCGCTCGTGTGGTCGTCGCTGGCAGCGGGC
CTGTCGATGGGATTCTCCTTTCTCACAATGGCTGTTCTGCAAGCCGGCCTTCCCGATACGTCGTGGCAGCATCTCGTCGC
GAGCTTCGGCTACACGACGGGATTCGTCCTCGTCATCATGGGACGGCAGCAGCTTTTCAGCGAAAGCACGTTGACCGTGA
TCCTTCCCGTGCTCACGCGCCGCGAGCTGGACTGCCTGCTCAAGGCGCTGCGTTTGTGGATCGTCGTGCTCTTCTGCAAC
GTGATCGGCTCATGGATCTTCGCGGCGATGCTGCGTCTGCCGGGTGTTTTCGGAGCAGAGGTCGTCGAAGCGCTCGACGA
AACCGCGCGCGCCGCCATCGGCCCAATCGATACTTTCCCCACCTTCATGCGCGCGGTGTTCGGCGGATGGCTGATCGCGC
TGATGGTATGGCTTCTGCCGAGCGCGCGCTCCGCACGGCTTCTGACCGTGGTGCTGATCACATGGGTGGTGGCTGTCGCG
AAGCTGTCGCACATCATCGCCGGGTCGACGGAGGTCGCGTACGCAGTGCTGGCAGGCGACGCGTCGCTGCCCGACTACTT
CAACCGCTTTCTGCTGCCAACGCTCGCGGGCAATGTCGTGGGCGGCATCTCGCTCGTCGCGCTGCTGAATCATGCCGCGA
TTGCGCCTGAAATCGGCGAGCGACGCTAG

Upstream 100 bases:

>100_bases
CTCGTCCGACGAAAAACGACAACCTGTCCGCCATGCCGGGCACTCTTTTTGCGAAACGCAACGCGATGCGCCTGTGAGCC
GCGCAAGAGCGAGCGCCGCC

Downstream 100 bases:

>100_bases
GCGCATGGCGTCGCTCTGCCGCGTGGGATGCCGCGCTTCGTGCGGCATCAGCATCACTGCGCCCGCTCATGTGAATGTGC
GCTTGCGCACATCACGCGCC

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTNEISRREYHFEATDCAESDDHPEKAGAESPHLDEGEKDQAAQHTAPHALMLHEIVREEGEAALGRTVMALVWSSLAAG
LSMGFSFLTMAVLQAGLPDTSWQHLVASFGYTTGFVLVIMGRQQLFSESTLTVILPVLTRRELDCLLKALRLWIVVLFCN
VIGSWIFAAMLRLPGVFGAEVVEALDETARAAIGPIDTFPTFMRAVFGGWLIALMVWLLPSARSARLLTVVLITWVVAVA
KLSHIIAGSTEVAYAVLAGDASLPDYFNRFLLPTLAGNVVGGISLVALLNHAAIAPEIGERR

Sequences:

>Translated_302_residues
MTNEISRREYHFEATDCAESDDHPEKAGAESPHLDEGEKDQAAQHTAPHALMLHEIVREEGEAALGRTVMALVWSSLAAG
LSMGFSFLTMAVLQAGLPDTSWQHLVASFGYTTGFVLVIMGRQQLFSESTLTVILPVLTRRELDCLLKALRLWIVVLFCN
VIGSWIFAAMLRLPGVFGAEVVEALDETARAAIGPIDTFPTFMRAVFGGWLIALMVWLLPSARSARLLTVVLITWVVAVA
KLSHIIAGSTEVAYAVLAGDASLPDYFNRFLLPTLAGNVVGGISLVALLNHAAIAPEIGERR
>Mature_301_residues
TNEISRREYHFEATDCAESDDHPEKAGAESPHLDEGEKDQAAQHTAPHALMLHEIVREEGEAALGRTVMALVWSSLAAGL
SMGFSFLTMAVLQAGLPDTSWQHLVASFGYTTGFVLVIMGRQQLFSESTLTVILPVLTRRELDCLLKALRLWIVVLFCNV
IGSWIFAAMLRLPGVFGAEVVEALDETARAAIGPIDTFPTFMRAVFGGWLIALMVWLLPSARSARLLTVVLITWVVAVAK
LSHIIAGSTEVAYAVLAGDASLPDYFNRFLLPTLAGNVVGGISLVALLNHAAIAPEIGERR

Specific function: Unknown

COG id: COG2116

COG function: function code P; Formate/nitrite family of transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788689, Length=290, Percent_Identity=37.2413793103448, Blast_Score=200, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000292 [H]

Pfam domain/function: PF01226 Form_Nir_trans [H]

EC number: NA

Molecular weight: Translated: 32736; Mature: 32605

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNEISRREYHFEATDCAESDDHPEKAGAESPHLDEGEKDQAAQHTAPHALMLHEIVREE
CCCCCCHHHHCCCHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
GEAALGRTVMALVWSSLAAGLSMGFSFLTMAVLQAGLPDTSWQHLVASFGYTTGFVLVIM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHH
GRQQLFSESTLTVILPVLTRRELDCLLKALRLWIVVLFCNVIGSWIFAAMLRLPGVFGAE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VVEALDETARAAIGPIDTFPTFMRAVFGGWLIALMVWLLPSARSARLLTVVLITWVVAVA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLSHIIAGSTEVAYAVLAGDASLPDYFNRFLLPTLAGNVVGGISLVALLNHAAIAPEIGE
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RR
CC
>Mature Secondary Structure 
TNEISRREYHFEATDCAESDDHPEKAGAESPHLDEGEKDQAAQHTAPHALMLHEIVREE
CCCCCHHHHCCCHHCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHH
GEAALGRTVMALVWSSLAAGLSMGFSFLTMAVLQAGLPDTSWQHLVASFGYTTGFVLVIM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHH
GRQQLFSESTLTVILPVLTRRELDCLLKALRLWIVVLFCNVIGSWIFAAMLRLPGVFGAE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VVEALDETARAAIGPIDTFPTFMRAVFGGWLIALMVWLLPSARSARLLTVVLITWVVAVA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KLSHIIAGSTEVAYAVLAGDASLPDYFNRFLLPTLAGNVVGGISLVALLNHAAIAPEIGE
HHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]