| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475959
Identifier: 186475959
GI number: 186475959
Start: 1340043
End: 1340366
Strand: Direct
Name: 186475959
Synonym: Bphy_1194
Alternate gene names: NA
Gene position: 1340043-1340366 (Clockwise)
Preceding gene: 186475953
Following gene: 186475963
Centisome position: 38.52
GC content: 57.72
Gene sequence:
>324_bases ATGTCGACGTTTGCCGTTGCGCACCTGCATGAAGTCAAGATGGGCATGGAGATTGTCGAGTACCTGAAACGTATCGATGC GACGCTTGCGCCGTATGGCGGCCATTTCGTGTTGCACGGCGGCCGTTATGAACTGCTCGAAGGCGATTGGCGCGGCGATC TGGTTGCCATCGAATTTCCGAATCGCGATCTCGCGCGCGCATGGTATAGGTCCGATGCGTATCAGACGATCCTGCCGCTG CGCACGGAGAACTCGATTGGCGACGTGATTCTGATCGACGCAGTGCCTGCATCGCATATCGCGACAGACGTGCTGTGCGG ATAG
Upstream 100 bases:
>100_bases GCGCGAATCACGAAGCTCACTGGACTTACCTCAGAGGTAATCGATTCGCTTCGCGCTCAGCGATAGGCTGCGTTCGTTGG TCAACAACCGGGAGAGCAGC
Downstream 100 bases:
>100_bases ATCGTCGATGACCTCGCGGCCCGGCGGGAGCGTTTCGTCGCGCGAAAACGCGCCCCATGTGCCGGCATCGCAATCAGCTT CCGAAGTACAGCGAGCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSTFAVAHLHEVKMGMEIVEYLKRIDATLAPYGGHFVLHGGRYELLEGDWRGDLVAIEFPNRDLARAWYRSDAYQTILPL RTENSIGDVILIDAVPASHIATDVLCG
Sequences:
>Translated_107_residues MSTFAVAHLHEVKMGMEIVEYLKRIDATLAPYGGHFVLHGGRYELLEGDWRGDLVAIEFPNRDLARAWYRSDAYQTILPL RTENSIGDVILIDAVPASHIATDVLCG >Mature_106_residues STFAVAHLHEVKMGMEIVEYLKRIDATLAPYGGHFVLHGGRYELLEGDWRGDLVAIEFPNRDLARAWYRSDAYQTILPLR TENSIGDVILIDAVPASHIATDVLCG
Specific function: Unknown
COG id: COG5470
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11955; Mature: 11824
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTFAVAHLHEVKMGMEIVEYLKRIDATLAPYGGHFVLHGGRYELLEGDWRGDLVAIEFP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCCCCEEEEECC NRDLARAWYRSDAYQTILPLRTENSIGDVILIDAVPASHIATDVLCG CCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCC >Mature Secondary Structure STFAVAHLHEVKMGMEIVEYLKRIDATLAPYGGHFVLHGGRYELLEGDWRGDLVAIEFP CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCCCCEEEEECC NRDLARAWYRSDAYQTILPLRTENSIGDVILIDAVPASHIATDVLCG CCHHHHHHHHCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA