| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475952
Identifier: 186475952
GI number: 186475952
Start: 1333890
End: 1334780
Strand: Reverse
Name: 186475952
Synonym: Bphy_1187
Alternate gene names: NA
Gene position: 1334780-1333890 (Counterclockwise)
Preceding gene: 186475954
Following gene: 186475951
Centisome position: 38.36
GC content: 68.57
Gene sequence:
>891_bases ATGTTTTCATTGCCTGCCGCGCCGCTGCGCGTTGCGTCCATACCTTTTGCCGCGCCGTGCGGCGAGATCGAACAGAATGT CGCGCGCGTCGTCGCCTGGATCGAGCGCGCGGCGCGCGAGCGCATCGGACTCGCGGTGTTTCCCGAAGCGTGTCTGACGG GCAGCGTCGACGGGCGCAGATTGGGGCGCGCGCAGATGAAGGCGCTCGCGACGAGCGTCGACGGCGGGTCCGTGCAAGCT GTCGCCGATGCCGTCGAACGAACAGGTGTGGCGGCGGGTGTCGGTTTGATCGAGCGCGCGCCGGATGGCGGGTTGTATAG CAGCTACGTCGTCTGCCTGCCGGACGGCGAGCGGCGCGTGCATCGCAAGCTGCAGACGGACGGTCAGCCGCATATCGCAA GCGGCGACCGCTTCACGGTGTTCGATCTGCAGAGAGGCTGGCGCATCGCCGTGCTGGCCGGCGGCGACAACTATCTGGTG GAGAACGCGCGAATCGCGGCGTTGCTCGGTGCGGGGCTGCTGGTTTCGCCGCACGCGCGCGCGGATGCAACTGACGAAGC GAACGCGTGGATGCGTCGAACGCTGCCGGCGCGCGCGCTCGACAACGGCCTGTTCGTGGTCTACAGCGACGACGGCGAGG GCGCCATCGTCGATCCGAGCGGCCACGTCGTCGCGCAGCGCGCAACCGGCGACGAGATGATTTCCGCGGAACTCGATCCC GCGCTGGTCGGCGCGAGTCCCGCGCAGCGATGGCTTGAAACGCGGCGCCCCGAACTGTATGCGCGGCTCGCGCACGGGTC GCGCACAGGCTCGCCTTCGGTCGAGCCGCGCAATGCCGGCTGTCGTGGCGCGATTGCCGTGAGCTTTGCAATCGTGAGGC GTGACAGATAG
Upstream 100 bases:
>100_bases ATTCTTACCAGTTATCGTATCGATCGGATTATTCATTTTACTAATCGACGAGCGGGCGGTCCAATGGCGACATTCCGTTG CTATCGTCTCCATGCCTGCC
Downstream 100 bases:
>100_bases CACAGCGCGCTAGCACATCGACGCAGAAACGCAACGTCGCGATCAGGATTCACACAAGAGGATCAACATACACACATCGA TAACAGCCCATTTTTTTCGC
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MFSLPAAPLRVASIPFAAPCGEIEQNVARVVAWIERAARERIGLAVFPEACLTGSVDGRRLGRAQMKALATSVDGGSVQA VADAVERTGVAAGVGLIERAPDGGLYSSYVVCLPDGERRVHRKLQTDGQPHIASGDRFTVFDLQRGWRIAVLAGGDNYLV ENARIAALLGAGLLVSPHARADATDEANAWMRRTLPARALDNGLFVVYSDDGEGAIVDPSGHVVAQRATGDEMISAELDP ALVGASPAQRWLETRRPELYARLAHGSRTGSPSVEPRNAGCRGAIAVSFAIVRRDR
Sequences:
>Translated_296_residues MFSLPAAPLRVASIPFAAPCGEIEQNVARVVAWIERAARERIGLAVFPEACLTGSVDGRRLGRAQMKALATSVDGGSVQA VADAVERTGVAAGVGLIERAPDGGLYSSYVVCLPDGERRVHRKLQTDGQPHIASGDRFTVFDLQRGWRIAVLAGGDNYLV ENARIAALLGAGLLVSPHARADATDEANAWMRRTLPARALDNGLFVVYSDDGEGAIVDPSGHVVAQRATGDEMISAELDP ALVGASPAQRWLETRRPELYARLAHGSRTGSPSVEPRNAGCRGAIAVSFAIVRRDR >Mature_296_residues MFSLPAAPLRVASIPFAAPCGEIEQNVARVVAWIERAARERIGLAVFPEACLTGSVDGRRLGRAQMKALATSVDGGSVQA VADAVERTGVAAGVGLIERAPDGGLYSSYVVCLPDGERRVHRKLQTDGQPHIASGDRFTVFDLQRGWRIAVLAGGDNYLV ENARIAALLGAGLLVSPHARADATDEANAWMRRTLPARALDNGLFVVYSDDGEGAIVDPSGHVVAQRATGDEMISAELDP ALVGASPAQRWLETRRPELYARLAHGSRTGSPSVEPRNAGCRGAIAVSFAIVRRDR
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 31394; Mature: 31394
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSLPAAPLRVASIPFAAPCGEIEQNVARVVAWIERAARERIGLAVFPEACLTGSVDGRR CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCHHH LGRAQMKALATSVDGGSVQAVADAVERTGVAAGVGLIERAPDGGLYSSYVVCLPDGERRV HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCEEEECCCCHHHH HRKLQTDGQPHIASGDRFTVFDLQRGWRIAVLAGGDNYLVENARIAALLGAGLLVSPHAR HHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECCCEEEEECCCCCEECCCCC ADATDEANAWMRRTLPARALDNGLFVVYSDDGEGAIVDPSGHVVAQRATGDEMISAELDP CCCCCHHHHHHHHCCCHHHHCCCEEEEECCCCCEEEECCCCCEEEEECCCCHHEECCCCC ALVGASPAQRWLETRRPELYARLAHGSRTGSPSVEPRNAGCRGAIAVSFAIVRRDR HHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC >Mature Secondary Structure MFSLPAAPLRVASIPFAAPCGEIEQNVARVVAWIERAARERIGLAVFPEACLTGSVDGRR CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHCCCCCHHH LGRAQMKALATSVDGGSVQAVADAVERTGVAAGVGLIERAPDGGLYSSYVVCLPDGERRV HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCEEEECCCCHHHH HRKLQTDGQPHIASGDRFTVFDLQRGWRIAVLAGGDNYLVENARIAALLGAGLLVSPHAR HHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEECCCEEEEECCCCCEECCCCC ADATDEANAWMRRTLPARALDNGLFVVYSDDGEGAIVDPSGHVVAQRATGDEMISAELDP CCCCCHHHHHHHHCCCHHHHCCCEEEEECCCCCEEEECCCCCEEEEECCCCHHEECCCCC ALVGASPAQRWLETRRPELYARLAHGSRTGSPSVEPRNAGCRGAIAVSFAIVRRDR HHCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8526497 [H]