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The map label for this gene is qseB [H]

Identifier: 186475948

GI number: 186475948

Start: 1330243

End: 1330929

Strand: Direct

Name: qseB [H]

Synonym: Bphy_1183

Alternate gene names: 186475948

Gene position: 1330243-1330929 (Clockwise)

Preceding gene: 186475940

Following gene: 186475949

Centisome position: 38.23

GC content: 66.08

Gene sequence:

>687_bases
ATGCCACTCCCGTCAGACCACGACACCATGCGCATTCTCCTCGTCGAAGACGACGACCTGATCGGCAGCGGACTGGAAGT
CGCGCTGCGCAACGCGGGCTTTACCGTCGACTGGGCGCGCGACGGTCAGCATGCGGAACTGGCGCTTGCAACCACGCACT
ATCTGCTCGTGATCCTCGATCTCGGCCTGCCGAAGCTTTCCGGCATGGATCTGCTGAAGTCACTGCGGCTGCGCGGCAAC
GAGATCCCCGTGCTCGTGCTGACCGCGAAAGACACGGCCGCCGACAAGGTGCGCGGCCTCGACGCGGGCGCCGACGATTA
CCTCGGCAAGCCGTTCGATCTCGCGGAACTCATCTCGCGCTGCCGCGCGCTGATCCGCCGCTCGCAGGGCCGCGGCAGCG
AGCTGATCGAGTGGCGCGGCCTGAGCGTCGATCCCGTCGCGCAGACGGTCTCGAAGGACGGTGCTCGCGTGCCTCTCACG
GCCCGGGAATGGGCCGTGCTGATTCACCTGCTCACCCATGCCGGCGTGCCGCAGCCACGCGCGCGCATCGAGGAAAGCCT
GTACGGCTGGCATGAAGAAGTCGAGAGCAATGCGATCGAAGTCCATGTGTCGAACCTGCGCAAGAAGCTCGGCGGCGACG
TGATCCGCACCGTGCGCGGCTTCGGCTACGTCGTGGACAAGACATGA

Upstream 100 bases:

>100_bases
GATGCTAACGGACAAAGCTGAAGAAAAGCTTAACGCCTGTCGGCGGCGCAAACCACATGTATACATGGCGCATCCGCGCT
AGACTGCGAGTCGATACGAT

Downstream 100 bases:

>100_bases
CGCGGCCGCGCTCGACGTCCACGTCGATTCGCCGCCGGCTGATGTGGCTGATCCTCGTCAGCGTCGGCGCGGTATGGGCG
GTGATGTTCGCGTGGAGCTT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MPLPSDHDTMRILLVEDDDLIGSGLEVALRNAGFTVDWARDGQHAELALATTHYLLVILDLGLPKLSGMDLLKSLRLRGN
EIPVLVLTAKDTAADKVRGLDAGADDYLGKPFDLAELISRCRALIRRSQGRGSELIEWRGLSVDPVAQTVSKDGARVPLT
AREWAVLIHLLTHAGVPQPRARIEESLYGWHEEVESNAIEVHVSNLRKKLGGDVIRTVRGFGYVVDKT

Sequences:

>Translated_228_residues
MPLPSDHDTMRILLVEDDDLIGSGLEVALRNAGFTVDWARDGQHAELALATTHYLLVILDLGLPKLSGMDLLKSLRLRGN
EIPVLVLTAKDTAADKVRGLDAGADDYLGKPFDLAELISRCRALIRRSQGRGSELIEWRGLSVDPVAQTVSKDGARVPLT
AREWAVLIHLLTHAGVPQPRARIEESLYGWHEEVESNAIEVHVSNLRKKLGGDVIRTVRGFGYVVDKT
>Mature_227_residues
PLPSDHDTMRILLVEDDDLIGSGLEVALRNAGFTVDWARDGQHAELALATTHYLLVILDLGLPKLSGMDLLKSLRLRGNE
IPVLVLTAKDTAADKVRGLDAGADDYLGKPFDLAELISRCRALIRRSQGRGSELIEWRGLSVDPVAQTVSKDGARVPLTA
REWAVLIHLLTHAGVPQPRARIEESLYGWHEEVESNAIEVHVSNLRKKLGGDVIRTVRGFGYVVDKT

Specific function: Member of a two-component regulatory system qseB/qseC [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=216, Percent_Identity=47.6851851851852, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=43.9814814814815, Blast_Score=176, Evalue=1e-45,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=39.1891891891892, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=37.1559633027523, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=37.10407239819, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=37.719298245614, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=36.3636363636364, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=30.3030303030303, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786911, Length=219, Percent_Identity=34.703196347032, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1788394, Length=229, Percent_Identity=32.7510917030568, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=29.2576419213974, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=31.0502283105023, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787229, Length=222, Percent_Identity=27.4774774774775, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788550, Length=168, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=28.2608695652174, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787487, Length=115, Percent_Identity=34.7826086956522, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790437, Length=111, Percent_Identity=34.2342342342342, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=31.5789473684211, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI145693157, Length=110, Percent_Identity=34.5454545454545, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25067; Mature: 24936

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPSDHDTMRILLVEDDDLIGSGLEVALRNAGFTVDWARDGQHAELALATTHYLLVILD
CCCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCEEEECCCCCCCEEEHHHHHHHHHHHH
LGLPKLSGMDLLKSLRLRGNEIPVLVLTAKDTAADKVRGLDAGADDYLGKPFDLAELISR
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCHHHCCCCCCHHHHHHH
CRALIRRSQGRGSELIEWRGLSVDPVAQTVSKDGARVPLTAREWAVLIHLLTHAGVPQPR
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
ARIEESLYGWHEEVESNAIEVHVSNLRKKLGGDVIRTVRGFGYVVDKT
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCHHHHHHHHHCEEEEECC
>Mature Secondary Structure 
PLPSDHDTMRILLVEDDDLIGSGLEVALRNAGFTVDWARDGQHAELALATTHYLLVILD
CCCCCCCCEEEEEEECCCCCCCCHHEEECCCCCEEEECCCCCCCEEEHHHHHHHHHHHH
LGLPKLSGMDLLKSLRLRGNEIPVLVLTAKDTAADKVRGLDAGADDYLGKPFDLAELISR
CCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCCCCHHHCCCCCCHHHHHHH
CRALIRRSQGRGSELIEWRGLSVDPVAQTVSKDGARVPLTAREWAVLIHLLTHAGVPQPR
HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
ARIEESLYGWHEEVESNAIEVHVSNLRKKLGGDVIRTVRGFGYVVDKT
HHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCHHHHHHHHHCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]