| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475942
Identifier: 186475942
GI number: 186475942
Start: 1324265
End: 1325320
Strand: Reverse
Name: 186475942
Synonym: Bphy_1177
Alternate gene names: NA
Gene position: 1325320-1324265 (Counterclockwise)
Preceding gene: 186475943
Following gene: 186475941
Centisome position: 38.09
GC content: 67.99
Gene sequence:
>1056_bases ATGATGAAGTGGCTCAAATGGTTGGGATTGCCCGCCGGCATCGCGGTGCTGATCGCGCTCGCGTTGCACAGCGGTATGAG CGACGTGCTGCATGCGATCGGCGCAGCGGGCTTCGCGCTGCTATGGCTCGTGCCGCTGCACGCATTGCCGTTGCTGCTCG ACGCGCAGGCGTGGTGGCTGCTGATCGGCAAGCGCGCGTCACTGCCGTATCTGTGGTGGGTCGCGACGGTGCGCGAAGCC GTTAGCCGGCTACTGCCCGTGGCGAGCATCGGCGGCGAGTTTGTCGGTGTGCGGCTCGCGCGGTGGAAGATCGACGAAAC AAGCGTGGTCGGCGCGTCGGTGATCGTCGAGGTGCTGGTGACGATGGCCGTTCAGTATGCATTCGCGGCGCTGGGGCTTG TGATGATCGTCGCGCAGACGGGGCATGACGACCTGCTCGTGACGATCGGCGCGGCACTGTTGCTGTCGTTGCCGCTGCCG GTCGTGGCGTTTGTGCTGCTGCGGCGCGGCGGGCTTTTTCACGCGATCGAACGCTGGTCCGCGCGTCTGCCGATGAGCGC GCACTGGGGCCTCGAGCGCCTCGGCGGCGCGCAGCTCGACGCCGCCATCGATACGCTGCTGAGCGAGCCTCTTCTGTTGC TGCGCGCGTTCGTCTGGCAGTTCGCCGGTTATCTGCTTGGCGCGTCGGAGGTGTACCTGGCGCTGTGGATGTTGGGGCAT CCCGTGTCGATCGGCGGCGCGATCGCCGTCGAGGCGCTCACGCAGGCGGCGCGTCATGCCGCGTTCTTCGTGCCGTCGGG GCTGGGCGTGCAGGAAGCCGTCGTCGTGCTGCTCGCGCGTATGTTCGGCGTCGACGAGCAGACGGCGCTGTCCCTGGCAC TCGTCAAGCGGATGCGCGAAGTCGTGTTCGGCTGTTTGTCGCTCGTCTCGTGGCAAGCGGCCGAGATCTTGCGCAACCGG CGCGACGCGTGGCAACAGAAAGCCGTGCTCAGGCCCGCCGAACAGCGCGTCGCGCGGCAGCGTGCCGACACCGGCGACGG CCGTCGCTCGCGCTGA
Upstream 100 bases:
>100_bases CGTCGCGGCGGCGCTGGCGGCGAGCGGCGCGATCACGGGCGGTTTCGCGGATGTGTTCGCGCAACGCGCATACATGTGAG GGACGCAGCTTTTTTTACCG
Downstream 100 bases:
>100_bases TGCACGGCCGTGCGCGCATGACGTGACACGCAGCATTACCGAATGCGGCGTTGCAGGGCGTATGCGCCGAATGCGCGGCG CGCGCTCATCCGCCGAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR RDAWQQKAVLRPAEQRVARQRADTGDGRRSR
Sequences:
>Translated_351_residues MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR RDAWQQKAVLRPAEQRVARQRADTGDGRRSR >Mature_351_residues MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWLLIGKRASLPYLWWVATVREA VSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLVTMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLP VVAFVLLRRGGLFHAIERWSARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMREVVFGCLSLVSWQAAEILRNR RDAWQQKAVLRPAEQRVARQRADTGDGRRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38124; Mature: 38124
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWL CCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LIGKRASLPYLWWVATVREAVSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLV HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHHH TMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLPVVAFVLLRRGGLFHAIERWS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH ARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH HCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMRE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VVFGCLSLVSWQAAEILRNRRDAWQQKAVLRPAEQRVARQRADTGDGRRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMKWLKWLGLPAGIAVLIALALHSGMSDVLHAIGAAGFALLWLVPLHALPLLLDAQAWWL CCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LIGKRASLPYLWWVATVREAVSRLLPVASIGGEFVGVRLARWKIDETSVVGASVIVEVLV HEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHHH TMAVQYAFAALGLVMIVAQTGHDDLLVTIGAALLLSLPLPVVAFVLLRRGGLFHAIERWS HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHH ARLPMSAHWGLERLGGAQLDAAIDTLLSEPLLLLRAFVWQFAGYLLGASEVYLALWMLGH HCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC PVSIGGAIAVEALTQAARHAAFFVPSGLGVQEAVVVLLARMFGVDEQTALSLALVKRMRE CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH VVFGCLSLVSWQAAEILRNRRDAWQQKAVLRPAEQRVARQRADTGDGRRSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA