| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475938
Identifier: 186475938
GI number: 186475938
Start: 1318575
End: 1319573
Strand: Reverse
Name: 186475938
Synonym: Bphy_1173
Alternate gene names: NA
Gene position: 1319573-1318575 (Counterclockwise)
Preceding gene: 186475939
Following gene: 186475937
Centisome position: 37.93
GC content: 62.16
Gene sequence:
>999_bases ATGATGCAAGTCACGACAGCCGCCGATCTTTTCGCCGCGCCGCGCTTTCGCTCCGGCGTGCAGCTGACCGAGGAAGACGA TGGCCTGACCGTCGACTATCGCGAGCAGTCGTGCTCGGTGATCGCCGGCAAGCGCGGCGCGCTCGGAGCGTTCGTCGAAT CGCTCAGACGCGGCGACACGTCGATTCCCGAACTCAAGCGCCGACATACCGAACTCGCGCCGGAAATCGACGGGCTGATC GAGGAGTTCGACAGGCTCGGCCTGTTGACGGAAAGCGCGTTTCCCGAGCCGCAGGGGTGTCTGTCCGGCGAGGAGTTCTA TCACCGGCTCAGGACCTTCGCCTCGGAGACGATTGCCGCGAAGTCGAAATCACGGCTCTATCAGGGGCTGTGCGACCGCA CGCTGCCGAAGAGCGCGCTGATCGGCTATGCGCTCGAATACTTCTATATCGTGCGCGAGGCGCCGGGGCTGATCGCCCCC GCGCTCACGCACGCCGCGCCTGTCAAGGTGCAGAAGTTGCTGCAAGGCTTTCTCGCCTCCGAACTGAATCACGACGACAT GCTGCGGCAGTCCCTGCGCGCCGTCTCGATTCGCACCGACAATCTCGACGGTCTGGTGCCGCTGCCCGCCACGTTCGCGC TGTGCGCATCGTTGGGCGTGTATGCGCGCCAGCATCCGTTGAGCTTTAAGTCGCTGCTGTTCCTGTTCGAGCAGCCGAGC GTCAGCTTTCATATCGAACTGGCGAACTATTGCCGGGAGAAGGGCATCCCCGAGGGCTTTTGGCGCCCGATCGCCCGTCA CGCGTCGATCAACGACGAGTTCGATCACGAAGACATCTCGCTCAGCCTGTTATCCGAAATCGAAGCCGTGTCGCCGGAAG AGCAGATGACGGTCAAGAAGCACGTGATGCTCGCCATCGAAACCATGGTGCTGCAGGAAAACCAGATTCTCGATTTCTAC GGCAAGCAGCCCGTCGTCACACCGCGCATCTTTGCCTGA
Upstream 100 bases:
>100_bases ATCTGTTCATCGAACTCTACGACCAGTTCTACACGGGCATCTGGGAACATTATTCGACGTCGCCGACGCTGTTGCGTCAG CTCGACGTCAGCGGAGACGC
Downstream 100 bases:
>100_bases GAACGGTCATGGAACGCTGGGATATCGATCGATACAGACGGCCGGCGCTGGTGCCGTGCGAGGTCTCGTCAGGCGGCGAG GTGTTGACGATCGGCATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MMQVTTAADLFAAPRFRSGVQLTEEDDGLTVDYREQSCSVIAGKRGALGAFVESLRRGDTSIPELKRRHTELAPEIDGLI EEFDRLGLLTESAFPEPQGCLSGEEFYHRLRTFASETIAAKSKSRLYQGLCDRTLPKSALIGYALEYFYIVREAPGLIAP ALTHAAPVKVQKLLQGFLASELNHDDMLRQSLRAVSIRTDNLDGLVPLPATFALCASLGVYARQHPLSFKSLLFLFEQPS VSFHIELANYCREKGIPEGFWRPIARHASINDEFDHEDISLSLLSEIEAVSPEEQMTVKKHVMLAIETMVLQENQILDFY GKQPVVTPRIFA
Sequences:
>Translated_332_residues MMQVTTAADLFAAPRFRSGVQLTEEDDGLTVDYREQSCSVIAGKRGALGAFVESLRRGDTSIPELKRRHTELAPEIDGLI EEFDRLGLLTESAFPEPQGCLSGEEFYHRLRTFASETIAAKSKSRLYQGLCDRTLPKSALIGYALEYFYIVREAPGLIAP ALTHAAPVKVQKLLQGFLASELNHDDMLRQSLRAVSIRTDNLDGLVPLPATFALCASLGVYARQHPLSFKSLLFLFEQPS VSFHIELANYCREKGIPEGFWRPIARHASINDEFDHEDISLSLLSEIEAVSPEEQMTVKKHVMLAIETMVLQENQILDFY GKQPVVTPRIFA >Mature_332_residues MMQVTTAADLFAAPRFRSGVQLTEEDDGLTVDYREQSCSVIAGKRGALGAFVESLRRGDTSIPELKRRHTELAPEIDGLI EEFDRLGLLTESAFPEPQGCLSGEEFYHRLRTFASETIAAKSKSRLYQGLCDRTLPKSALIGYALEYFYIVREAPGLIAP ALTHAAPVKVQKLLQGFLASELNHDDMLRQSLRAVSIRTDNLDGLVPLPATFALCASLGVYARQHPLSFKSLLFLFEQPS VSFHIELANYCREKGIPEGFWRPIARHASINDEFDHEDISLSLLSEIEAVSPEEQMTVKKHVMLAIETMVLQENQILDFY GKQPVVTPRIFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37101; Mature: 37101
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQVTTAADLFAAPRFRSGVQLTEEDDGLTVDYREQSCSVIAGKRGALGAFVESLRRGDT CCEECCHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCEECCCCCHHHHHHHHHHCCCC SIPELKRRHTELAPEIDGLIEEFDRLGLLTESAFPEPQGCLSGEEFYHRLRTFASETIAA CHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSKSRLYQGLCDRTLPKSALIGYALEYFYIVREAPGLIAPALTHAAPVKVQKLLQGFLAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELNHDDMLRQSLRAVSIRTDNLDGLVPLPATFALCASLGVYARQHPLSFKSLLFLFEQPS HCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VSFHIELANYCREKGIPEGFWRPIARHASINDEFDHEDISLSLLSEIEAVSPEEQMTVKK CEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH HVMLAIETMVLQENQILDFYGKQPVVTPRIFA HHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MMQVTTAADLFAAPRFRSGVQLTEEDDGLTVDYREQSCSVIAGKRGALGAFVESLRRGDT CCEECCHHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCEECCCCCHHHHHHHHHHCCCC SIPELKRRHTELAPEIDGLIEEFDRLGLLTESAFPEPQGCLSGEEFYHRLRTFASETIAA CHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KSKSRLYQGLCDRTLPKSALIGYALEYFYIVREAPGLIAPALTHAAPVKVQKLLQGFLAS HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH ELNHDDMLRQSLRAVSIRTDNLDGLVPLPATFALCASLGVYARQHPLSFKSLLFLFEQPS HCCHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC VSFHIELANYCREKGIPEGFWRPIARHASINDEFDHEDISLSLLSEIEAVSPEEQMTVKK CEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH HVMLAIETMVLQENQILDFYGKQPVVTPRIFA HHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA