| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475939
Identifier: 186475939
GI number: 186475939
Start: 1319570
End: 1320556
Strand: Reverse
Name: 186475939
Synonym: Bphy_1174
Alternate gene names: NA
Gene position: 1320556-1319570 (Counterclockwise)
Preceding gene: 186475941
Following gene: 186475938
Centisome position: 37.96
GC content: 58.97
Gene sequence:
>987_bases ATGGACGACATTTTTGAACCACAGGCGTTTGTGCTGGCGGGAAAGTGTCTCAGCACGTCGCCTTCGCTCATCATCGAAGA CGACGCGCATCAGTATGAATTTCCGGCATCGGTCGACGGTGAAGACGCTGTGCCTCTCATCAGCGCGCTGCGCTCCGGTG TGAAGGCGGAGGAGGTGTTGGTCCGCTACTCGCCGTACGAACGAAAACTGTTCGACCGTCTGAAGGAACTGCAACTGGTG CGCGCGGTAAAGCCCGCGCTGGCGCGCAGCGGCCTCGACGTGCTGCTCGAACTCGAAGATCTCGCCAACGAACTGCTATA CCGCACGCTTTATACAAACGTGTTCTGGGAAAACTGCGCGTCCGCGAGCACGTGCGAAGACATTCCCCTCAACGTGATCC ACGGCATGATCGTGGAGAACTACCATTTCCTGTTTCGCGAAAGCTACTTCGACGCGCCGGTGCTGTCGTACGTCGCCAAT ACGGGCGTGCGGCTCGCAATGAACGAGTTCTACGCGGAAGAGTACGGTCACGATGAACTGCTGCTCAAGGCGCTGAACAC GCTGGGCGTGTCGCGCGAAGATCTGGCGCGCACGGTGCCGCTGCCGCAAACGATGGCGCTGTGCAATGCGCTCGCCTTCT GGGCGCATAGCGATCCGCTGTTCTTCTTTTCGACGCTCGGCATTCTCGAAGGCAAGGACATCAAGCAGGATTCCTTCCTC GATGCCGCCTATCGGATCGGCGTCGATCCCGTGCTGCTCAAGCCTGTGAAAGTGCATTCCGACATCAACTTGAATGGCGC ACACGGCAGCCTCACGCGCAAGATCTTTTCGCGCATTCCCGCCATCGCCGATTCGGACGTGCGCCGTCTGCGCGCACAGA CGCATCTGTTCATCGAACTCTACGACCAGTTCTACACGGGCATCTGGGAACATTATTCGACGTCGCCGACGCTGTTGCGT CAGCTCGACGTCAGCGGAGACGCATGA
Upstream 100 bases:
>100_bases GTGGTCAAGCCGCGCAAAGCACGGCCCGTGCTCATTCCGGTTCACCTGTAATCGACCAGCCGGCACCGTCGCGTGCCGGC CATGAACGGAGGCTGTCGCG
Downstream 100 bases:
>100_bases TGCAAGTCACGACAGCCGCCGATCTTTTCGCCGCGCCGCGCTTTCGCTCCGGCGTGCAGCTGACCGAGGAAGACGATGGC CTGACCGTCGACTATCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MDDIFEPQAFVLAGKCLSTSPSLIIEDDAHQYEFPASVDGEDAVPLISALRSGVKAEEVLVRYSPYERKLFDRLKELQLV RAVKPALARSGLDVLLELEDLANELLYRTLYTNVFWENCASASTCEDIPLNVIHGMIVENYHFLFRESYFDAPVLSYVAN TGVRLAMNEFYAEEYGHDELLLKALNTLGVSREDLARTVPLPQTMALCNALAFWAHSDPLFFFSTLGILEGKDIKQDSFL DAAYRIGVDPVLLKPVKVHSDINLNGAHGSLTRKIFSRIPAIADSDVRRLRAQTHLFIELYDQFYTGIWEHYSTSPTLLR QLDVSGDA
Sequences:
>Translated_328_residues MDDIFEPQAFVLAGKCLSTSPSLIIEDDAHQYEFPASVDGEDAVPLISALRSGVKAEEVLVRYSPYERKLFDRLKELQLV RAVKPALARSGLDVLLELEDLANELLYRTLYTNVFWENCASASTCEDIPLNVIHGMIVENYHFLFRESYFDAPVLSYVAN TGVRLAMNEFYAEEYGHDELLLKALNTLGVSREDLARTVPLPQTMALCNALAFWAHSDPLFFFSTLGILEGKDIKQDSFL DAAYRIGVDPVLLKPVKVHSDINLNGAHGSLTRKIFSRIPAIADSDVRRLRAQTHLFIELYDQFYTGIWEHYSTSPTLLR QLDVSGDA >Mature_328_residues MDDIFEPQAFVLAGKCLSTSPSLIIEDDAHQYEFPASVDGEDAVPLISALRSGVKAEEVLVRYSPYERKLFDRLKELQLV RAVKPALARSGLDVLLELEDLANELLYRTLYTNVFWENCASASTCEDIPLNVIHGMIVENYHFLFRESYFDAPVLSYVAN TGVRLAMNEFYAEEYGHDELLLKALNTLGVSREDLARTVPLPQTMALCNALAFWAHSDPLFFFSTLGILEGKDIKQDSFL DAAYRIGVDPVLLKPVKVHSDINLNGAHGSLTRKIFSRIPAIADSDVRRLRAQTHLFIELYDQFYTGIWEHYSTSPTLLR QLDVSGDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36927; Mature: 36927
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIFEPQAFVLAGKCLSTSPSLIIEDDAHQYEFPASVDGEDAVPLISALRSGVKAEEVL CCCCCCCCHHEEECHHHCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHCCCCHHHHH VRYSPYERKLFDRLKELQLVRAVKPALARSGLDVLLELEDLANELLYRTLYTNVFWENCA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SASTCEDIPLNVIHGMIVENYHFLFRESYFDAPVLSYVANTGVRLAMNEFYAEEYGHDEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHH LLKALNTLGVSREDLARTVPLPQTMALCNALAFWAHSDPLFFFSTLGILEGKDIKQDSFL HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH DAAYRIGVDPVLLKPVKVHSDINLNGAHGSLTRKIFSRIPAIADSDVRRLRAQTHLFIEL HHHHHCCCCHHEECCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YDQFYTGIWEHYSTSPTLLRQLDVSGDA HHHHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure MDDIFEPQAFVLAGKCLSTSPSLIIEDDAHQYEFPASVDGEDAVPLISALRSGVKAEEVL CCCCCCCCHHEEECHHHCCCCCEEEECCCCCEECCCCCCCCCHHHHHHHHHCCCCHHHHH VRYSPYERKLFDRLKELQLVRAVKPALARSGLDVLLELEDLANELLYRTLYTNVFWENCA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SASTCEDIPLNVIHGMIVENYHFLFRESYFDAPVLSYVANTGVRLAMNEFYAEEYGHDEL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHH LLKALNTLGVSREDLARTVPLPQTMALCNALAFWAHSDPLFFFSTLGILEGKDIKQDSFL HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHH DAAYRIGVDPVLLKPVKVHSDINLNGAHGSLTRKIFSRIPAIADSDVRRLRAQTHLFIEL HHHHHCCCCHHEECCEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH YDQFYTGIWEHYSTSPTLLRQLDVSGDA HHHHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA