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The map label for this gene is fnrA [H]

Identifier: 186475903

GI number: 186475903

Start: 1279935

End: 1280717

Strand: Direct

Name: fnrA [H]

Synonym: Bphy_1138

Alternate gene names: 186475903

Gene position: 1279935-1280717 (Clockwise)

Preceding gene: 186475902

Following gene: 186475904

Centisome position: 36.79

GC content: 60.54

Gene sequence:

>783_bases
ATGCTTGCCGCAAACACGCAGACGTCCAATCATGTTCCGGGCCGCGCCGCCGCGGTCATTCCGATCCGGCCCGTTCAAGA
CAGCGATGCGCCGCGTCACGGCACGGCACGCTGCTCGTCATGTTCGATGCGCTCGATCTGCATGCCTCCCGAGCTGAGCG
CAGAAGATCTGTCGAAGCTCGATACCATCATCTGCTCCACGAGGGCGGTCAAACGCGGCGACACGTTGTATCGCGCCGGC
GACTCGTTCAAGAGCATCTATGCGATACGGGCTGGGTCGTTCAAAACAGTCGTCATGCACCGTGACGGTCGCGAGCACGT
GACAGGATTCGAGATTGCAGGTGAAACGCTTGGCCTCGATGGTGTCTGTGCCGGCCAGCACAACTGTGACGCGATCGCGC
TTGAGGACAGTGTCGTCTGCATCATTCCGTTCGCGCAGCTCGAGATCATCTGTCGCGAAGTGAAGTCCATGCAGCATCAC
ATCTATCGGATGATGAGCGGCGAGATCGTGCGGGATTCTGTGCAAATGATGCTGCTCGGCACCATGTCGGCGGAGCAGCG
CGTGGCCACGTTCCTGCTCAATCTCTCCAGGCGTTTCAAGGCGCGCGGCTTCTCGGCCGCCGAGTTCCACCTGCGCATGA
CGCGCGAGGAAATCGGCTGCTACCTTGGCATGAAGCTCGAAACCGTGAGCCGCATGTTCTCGAAATTCCAGCGTGGGCAT
CTCGTCCATGCCAACGGAAAGACGGTCCGGATCGTCGACCCGGAAGGGCTCGCGAACGTGTGA

Upstream 100 bases:

>100_bases
AAAGCACCGCCGATACCTTTTTGCGATACGAGCGCCAATACTTGGTTCATCGCGAGTCGCCGCACGCATGCGCGCGCAGA
CGAGAATTGAGGAGACAAAG

Downstream 100 bases:

>100_bases
CCGGGCGCGGCGGGAAGCAGGTTGAGCCACGTCGGTGGTAATGAGGCGTGCTGGCTGGCGCCGCCTCAGTATAGACGTTG
ATTTGCCTCAACGATGAGTC

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLAANTQTSNHVPGRAAAVIPIRPVQDSDAPRHGTARCSSCSMRSICMPPELSAEDLSKLDTIICSTRAVKRGDTLYRAG
DSFKSIYAIRAGSFKTVVMHRDGREHVTGFEIAGETLGLDGVCAGQHNCDAIALEDSVVCIIPFAQLEIICREVKSMQHH
IYRMMSGEIVRDSVQMMLLGTMSAEQRVATFLLNLSRRFKARGFSAAEFHLRMTREEIGCYLGMKLETVSRMFSKFQRGH
LVHANGKTVRIVDPEGLANV

Sequences:

>Translated_260_residues
MLAANTQTSNHVPGRAAAVIPIRPVQDSDAPRHGTARCSSCSMRSICMPPELSAEDLSKLDTIICSTRAVKRGDTLYRAG
DSFKSIYAIRAGSFKTVVMHRDGREHVTGFEIAGETLGLDGVCAGQHNCDAIALEDSVVCIIPFAQLEIICREVKSMQHH
IYRMMSGEIVRDSVQMMLLGTMSAEQRVATFLLNLSRRFKARGFSAAEFHLRMTREEIGCYLGMKLETVSRMFSKFQRGH
LVHANGKTVRIVDPEGLANV
>Mature_260_residues
MLAANTQTSNHVPGRAAAVIPIRPVQDSDAPRHGTARCSSCSMRSICMPPELSAEDLSKLDTIICSTRAVKRGDTLYRAG
DSFKSIYAIRAGSFKTVVMHRDGREHVTGFEIAGETLGLDGVCAGQHNCDAIALEDSVVCIIPFAQLEIICREVKSMQHH
IYRMMSGEIVRDSVQMMLLGTMSAEQRVATFLLNLSRRFKARGFSAAEFHLRMTREEIGCYLGMKLETVSRMFSKFQRGH
LVHANGKTVRIVDPEGLANV

Specific function: Transcriptional regulator of arginine deiminase [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787595, Length=239, Percent_Identity=40.5857740585774, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 28690; Mature: 28690

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAANTQTSNHVPGRAAAVIPIRPVQDSDAPRHGTARCSSCSMRSICMPPELSAEDLSKL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
DTIICSTRAVKRGDTLYRAGDSFKSIYAIRAGSFKTVVMHRDGREHVTGFEIAGETLGLD
HHHHHHHHHHHCCCCEEECCCCHHEEEEEECCCEEEEEEECCCCCCCCEEEECCCEECCC
GVCAGQHNCDAIALEDSVVCIIPFAQLEIICREVKSMQHHIYRMMSGEIVRDSVQMMLLG
CEECCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TMSAEQRVATFLLNLSRRFKARGFSAAEFHLRMTREEIGCYLGMKLETVSRMFSKFQRGH
CCCHHHHHHHHHHHHHHHHHHCCCCEEHHHEEECHHHHCEEECCHHHHHHHHHHHHHCCC
LVHANGKTVRIVDPEGLANV
EEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MLAANTQTSNHVPGRAAAVIPIRPVQDSDAPRHGTARCSSCSMRSICMPPELSAEDLSKL
CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
DTIICSTRAVKRGDTLYRAGDSFKSIYAIRAGSFKTVVMHRDGREHVTGFEIAGETLGLD
HHHHHHHHHHHCCCCEEECCCCHHEEEEEECCCEEEEEEECCCCCCCCEEEECCCEECCC
GVCAGQHNCDAIALEDSVVCIIPFAQLEIICREVKSMQHHIYRMMSGEIVRDSVQMMLLG
CEECCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TMSAEQRVATFLLNLSRRFKARGFSAAEFHLRMTREEIGCYLGMKLETVSRMFSKFQRGH
CCCHHHHHHHHHHHHHHHHHHCCCCEEHHHEEECHHHHCEEECCHHHHHHHHHHHHHCCC
LVHANGKTVRIVDPEGLANV
EEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226670 [H]