| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475904
Identifier: 186475904
GI number: 186475904
Start: 1280885
End: 1281916
Strand: Direct
Name: 186475904
Synonym: Bphy_1139
Alternate gene names: NA
Gene position: 1280885-1281916 (Clockwise)
Preceding gene: 186475903
Following gene: 186475905
Centisome position: 36.82
GC content: 62.98
Gene sequence:
>1032_bases ATGAACACCGCGACAACGCCGTCGGCGTGGGAGCTGAACGAAAAGGATTTCGATGCGCAAGCGCCACTCGAACAGCAGTT GCGATTTGCACTGCGGTACGCGGTTCTCGCCCCTTCCAATCACAACACGCAGCCGTGGCGGTTCATCGTCGACGGACCGG CTGTTCAGGTATGCGCGGACTGCACGCGGGCGTTGCCCGTTGTCGACCCGTTCGATCGCGAGCTGCTCATTAGTTGTGGT GCAGCGCTGCTCAACCTGCGGGTCGCATTGAGCCACTTCGGGCTGTCGTATGCAATCGCCGTCTTTCCCTCCGAATCCGA TCCCGACATCGTCGCTCAGTTGCGAGTCTCGAGAGACGGTCATGTCGACAAGGCGCTCGCCGATCTCTTCGCTGCATTGA CGTCTCGCGTGACGACCCGAGCGCCGTTCGTCGACAAGCCCGTAGAGCCCGATCTTCAGTCGGATCTGGCCGCCGCCTGC GACGCGGAAGGAGCCCTCGCGACCTGCGTCGAAGCCGAGACTACGCGCCACGCAATCGCTCAACTGATCGCTGAGGCGGA CCATGCGCAATTCGCCGATGCGCGCTTTCGCAGGGAGCTGGCGAGCTGGATTCATCCACACCGCCGGGACGACGGTATGC CCGCGTATGGCGCGGCTGTCGGCAGGCTGCTCGATTTCGCGGCGCCTCTCGTCACGACGGTCGTTCGTGTATTTGACGTT GGCGCCGGCGCGCCGGCCACGCATCAGCGGCTTGTCGAAGGGTCGCCGCTGTTTGTCGGTATCTCGACGGACCGCGACGA CCGCGAAGCGTGGCTTGCAACCGGGCAGGCGCTAGAACGGATGCTGCTACTCGCGGCGTCGAGAGGACTGACGGCGTCGT ACCTCAATCAGCCTATCGAAGTATCAACGCTGCGCGAAACGTTAAGAAGCCTGCTTGAAGTCGATGCGTTCCCGCAGTTG CTGCTGCGTATGGGCCGTGGTCCGCGGGTCGATCACTCGCCCAGACGATCGTTGTCGGACGTCGTCGATTAA
Upstream 100 bases:
>100_bases AGTATAGACGTTGATTTGCCTCAACGATGAGTCGCTGTGACATGCCACGATGAATAGCAGGCAAAGGACATCCACGTCGT ACGGGCAAAGGACATCTCAC
Downstream 100 bases:
>100_bases TGGCAAATCACCCGAATCAAAGAGGAGCGTCTACCGTGAGCCATCCCCGTTGGTCCATCCTGCTTGCCTTCGCATCAGGT CTCTTCGCTGCCGGAATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MNTATTPSAWELNEKDFDAQAPLEQQLRFALRYAVLAPSNHNTQPWRFIVDGPAVQVCADCTRALPVVDPFDRELLISCG AALLNLRVALSHFGLSYAIAVFPSESDPDIVAQLRVSRDGHVDKALADLFAALTSRVTTRAPFVDKPVEPDLQSDLAAAC DAEGALATCVEAETTRHAIAQLIAEADHAQFADARFRRELASWIHPHRRDDGMPAYGAAVGRLLDFAAPLVTTVVRVFDV GAGAPATHQRLVEGSPLFVGISTDRDDREAWLATGQALERMLLLAASRGLTASYLNQPIEVSTLRETLRSLLEVDAFPQL LLRMGRGPRVDHSPRRSLSDVVD
Sequences:
>Translated_343_residues MNTATTPSAWELNEKDFDAQAPLEQQLRFALRYAVLAPSNHNTQPWRFIVDGPAVQVCADCTRALPVVDPFDRELLISCG AALLNLRVALSHFGLSYAIAVFPSESDPDIVAQLRVSRDGHVDKALADLFAALTSRVTTRAPFVDKPVEPDLQSDLAAAC DAEGALATCVEAETTRHAIAQLIAEADHAQFADARFRRELASWIHPHRRDDGMPAYGAAVGRLLDFAAPLVTTVVRVFDV GAGAPATHQRLVEGSPLFVGISTDRDDREAWLATGQALERMLLLAASRGLTASYLNQPIEVSTLRETLRSLLEVDAFPQL LLRMGRGPRVDHSPRRSLSDVVD >Mature_343_residues MNTATTPSAWELNEKDFDAQAPLEQQLRFALRYAVLAPSNHNTQPWRFIVDGPAVQVCADCTRALPVVDPFDRELLISCG AALLNLRVALSHFGLSYAIAVFPSESDPDIVAQLRVSRDGHVDKALADLFAALTSRVTTRAPFVDKPVEPDLQSDLAAAC DAEGALATCVEAETTRHAIAQLIAEADHAQFADARFRRELASWIHPHRRDDGMPAYGAAVGRLLDFAAPLVTTVVRVFDV GAGAPATHQRLVEGSPLFVGISTDRDDREAWLATGQALERMLLLAASRGLTASYLNQPIEVSTLRETLRSLLEVDAFPQL LLRMGRGPRVDHSPRRSLSDVVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: NA
Molecular weight: Translated: 37376; Mature: 37376
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTATTPSAWELNEKDFDAQAPLEQQLRFALRYAVLAPSNHNTQPWRFIVDGPAVQVCAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH CTRALPVVDPFDRELLISCGAALLNLRVALSHFGLSYAIAVFPSESDPDIVAQLRVSRDG HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHCCCC HVDKALADLFAALTSRVTTRAPFVDKPVEPDLQSDLAAACDAEGALATCVEAETTRHAIA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QLIAEADHAQFADARFRRELASWIHPHRRDDGMPAYGAAVGRLLDFAAPLVTTVVRVFDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GAGAPATHQRLVEGSPLFVGISTDRDDREAWLATGQALERMLLLAASRGLTASYLNQPIE CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH VSTLRETLRSLLEVDAFPQLLLRMGRGPRVDHSPRRSLSDVVD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNTATTPSAWELNEKDFDAQAPLEQQLRFALRYAVLAPSNHNTQPWRFIVDGPAVQVCAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHH CTRALPVVDPFDRELLISCGAALLNLRVALSHFGLSYAIAVFPSESDPDIVAQLRVSRDG HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHCCCC HVDKALADLFAALTSRVTTRAPFVDKPVEPDLQSDLAAACDAEGALATCVEAETTRHAIA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH QLIAEADHAQFADARFRRELASWIHPHRRDDGMPAYGAAVGRLLDFAAPLVTTVVRVFDV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GAGAPATHQRLVEGSPLFVGISTDRDDREAWLATGQALERMLLLAASRGLTASYLNQPIE CCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCH VSTLRETLRSLLEVDAFPQLLLRMGRGPRVDHSPRRSLSDVVD HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]