| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475874
Identifier: 186475874
GI number: 186475874
Start: 1254262
End: 1255011
Strand: Direct
Name: 186475874
Synonym: Bphy_1109
Alternate gene names: NA
Gene position: 1254262-1255011 (Clockwise)
Preceding gene: 186475870
Following gene: 186475878
Centisome position: 36.05
GC content: 64.67
Gene sequence:
>750_bases ATGCTTCGGGTCGCCTCTATCCTGGAAGCGATGCACTTGCGCCTGGGCGAATGCATCGAGCCATCCATCGAGGAGTCGAT CATGAGCGACACGCAACTGCTGACTTACGAACCCGCGCACGGCCGTGCGCCGGCTCGTGCCCGGGGCGACACCCCTGCCG TTATCGAACTGCCGAAACCCGACATGTCATCTGGCGCGCCGCTGATGAAAGCCCTCGCGCTACGCGCCAGCACCCGCGAG TTCGCCGACGCGCCGCTTACCTCCGCCACGCTCGGCGCGTTGCTGTGGGCTGCCGATGGCATCAATCGGCCGCGCGCGGG AGGCCGTACCGCGCCATCGGCACACGCGTTCAATGAGATCGACCTGTACGCCGTGATGCCCAATGGCGTCTATCGATACG ATGCGCCTGCGCATCGGCTGGTCCTGAAACATGCAAGCGATGCGCGCAACCTGACCGGCTACCAGGACTTCGTCGGCGCG GCACCGCTCGACCTGGTCTACGTGGTTAACCTGTCCCGTCTGCTCGACATGCCGCCGCAGCAGCGCGATATCTTCTCTGC CGTCGCGGCAGGCGCAATGGCACAGAACGTATCGCTGTACTGCGCTTCCGAAGGACTCGGATGCGTGGTGCGCGGCTGGA TCAATCATCGCCTGCTGAGCGACGCGCTGAAGTTGAACGAGGACGAACTGCCCATTCTTGCGCAAACGGTTGGCGCGCCC GGCACGACGCTGACCTCTCTCGCGGACTGA
Upstream 100 bases:
>100_bases GCGCTGGTCGAACTGCTGCCGGGCGTTTCGGCGCGGTTACCGCGATCGGCTATGGGTCCCACACACCACATCGCGATGCG ATTGACTGAGGTCAACGGTC
Downstream 100 bases:
>100_bases CGTCGTCTCTTCCGGGCCTGCTTGCTGAATCCCCGGATTGCGCGAACAAGAACAAGGAAACGGGCCTGGCATTCAGGCCG GTTTCCCCGTTTTTCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NAD(P)H-Flavin Oxidoreductase; NADH Oxidase NoxC-Like Protein; SagB-Type Dehydrogenase Domain; NADH Oxidase; Nitroreductase Family Protein; SagB-Type Dehydrogenase Domain Protein; NADH Oxidase NoxC-Like
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MLRVASILEAMHLRLGECIEPSIEESIMSDTQLLTYEPAHGRAPARARGDTPAVIELPKPDMSSGAPLMKALALRASTRE FADAPLTSATLGALLWAADGINRPRAGGRTAPSAHAFNEIDLYAVMPNGVYRYDAPAHRLVLKHASDARNLTGYQDFVGA APLDLVYVVNLSRLLDMPPQQRDIFSAVAAGAMAQNVSLYCASEGLGCVVRGWINHRLLSDALKLNEDELPILAQTVGAP GTTLTSLAD
Sequences:
>Translated_249_residues MLRVASILEAMHLRLGECIEPSIEESIMSDTQLLTYEPAHGRAPARARGDTPAVIELPKPDMSSGAPLMKALALRASTRE FADAPLTSATLGALLWAADGINRPRAGGRTAPSAHAFNEIDLYAVMPNGVYRYDAPAHRLVLKHASDARNLTGYQDFVGA APLDLVYVVNLSRLLDMPPQQRDIFSAVAAGAMAQNVSLYCASEGLGCVVRGWINHRLLSDALKLNEDELPILAQTVGAP GTTLTSLAD >Mature_249_residues MLRVASILEAMHLRLGECIEPSIEESIMSDTQLLTYEPAHGRAPARARGDTPAVIELPKPDMSSGAPLMKALALRASTRE FADAPLTSATLGALLWAADGINRPRAGGRTAPSAHAFNEIDLYAVMPNGVYRYDAPAHRLVLKHASDARNLTGYQDFVGA APLDLVYVVNLSRLLDMPPQQRDIFSAVAAGAMAQNVSLYCASEGLGCVVRGWINHRLLSDALKLNEDELPILAQTVGAP GTTLTSLAD
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26611; Mature: 26611
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRVASILEAMHLRLGECIEPSIEESIMSDTQLLTYEPAHGRAPARARGDTPAVIELPKP CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCC DMSSGAPLMKALALRASTREFADAPLTSATLGALLWAADGINRPRAGGRTAPSAHAFNEI CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE DLYAVMPNGVYRYDAPAHRLVLKHASDARNLTGYQDFVGAAPLDLVYVVNLSRLLDMPPQ EEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCC QRDIFSAVAAGAMAQNVSLYCASEGLGCVVRGWINHRLLSDALKLNEDELPILAQTVGAP HHHHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC GTTLTSLAD CCCHHCCCC >Mature Secondary Structure MLRVASILEAMHLRLGECIEPSIEESIMSDTQLLTYEPAHGRAPARARGDTPAVIELPKP CCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCC DMSSGAPLMKALALRASTREFADAPLTSATLGALLWAADGINRPRAGGRTAPSAHAFNEI CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE DLYAVMPNGVYRYDAPAHRLVLKHASDARNLTGYQDFVGAAPLDLVYVVNLSRLLDMPPQ EEEEECCCCEEEECCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCC QRDIFSAVAAGAMAQNVSLYCASEGLGCVVRGWINHRLLSDALKLNEDELPILAQTVGAP HHHHHHHHHHHHHHHCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC GTTLTSLAD CCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA