| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475872
Identifier: 186475872
GI number: 186475872
Start: 1253088
End: 1253327
Strand: Reverse
Name: 186475872
Synonym: Bphy_1107
Alternate gene names: NA
Gene position: 1253327-1253088 (Counterclockwise)
Preceding gene: 186475873
Following gene: 186475871
Centisome position: 36.02
GC content: 57.5
Gene sequence:
>240_bases ATGACTTTATCGGGAAAGGTGCAGGAAGGAGAGTGGTCGGTGAGCGTGCAGACGGAAGCGGCCGAAGAGGGAGGCTATCG GTCGACGATCCATGTCAGGCATTCGTCGCCGGAAGGTGACTTCGAACGTACCTTTCGACATGACAAGCCATGCAGCACAG AACGCGAGGCGGTGCTGGACGGATTGCGGGAAGGCATGTCGTGGATCGGTTTGAAGATGGCGCGGACCATCAAGGTGTAA
Upstream 100 bases:
>100_bases GTGTTCGAGCCGTGGTCGACGACCTCGTTGTCGAATGACATACCGCCTGTCGCCGCCGCGCCTCTTCTCATCCGCGACGG CGAAGGACAAGGAGCCTGTG
Downstream 100 bases:
>100_bases AAGTTGCAGGCTCTTTTTCAGGCCTGACGCAAGTCAGGTGTTCGAGTCCATGCCCGCGTAACGCAGGCATGGTTCTGTGG CGAGATCAACCGAACGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTLSGKVQEGEWSVSVQTEAAEEGGYRSTIHVRHSSPEGDFERTFRHDKPCSTEREAVLDGLREGMSWIGLKMARTIKV
Sequences:
>Translated_79_residues MTLSGKVQEGEWSVSVQTEAAEEGGYRSTIHVRHSSPEGDFERTFRHDKPCSTEREAVLDGLREGMSWIGLKMARTIKV >Mature_78_residues TLSGKVQEGEWSVSVQTEAAEEGGYRSTIHVRHSSPEGDFERTFRHDKPCSTEREAVLDGLREGMSWIGLKMARTIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8880; Mature: 8749
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSGKVQEGEWSVSVQTEAAEEGGYRSTIHVRHSSPEGDFERTFRHDKPCSTEREAVLD CCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHH GLREGMSWIGLKMARTIKV HHHHHHHHHHHHHHEEECC >Mature Secondary Structure TLSGKVQEGEWSVSVQTEAAEEGGYRSTIHVRHSSPEGDFERTFRHDKPCSTEREAVLD CCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCCCHHHHHHH GLREGMSWIGLKMARTIKV HHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA