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The map label for this gene is phaC [H]

Identifier: 186475871

GI number: 186475871

Start: 1251132

End: 1252988

Strand: Reverse

Name: phaC [H]

Synonym: Bphy_1106

Alternate gene names: 186475871

Gene position: 1252988-1251132 (Counterclockwise)

Preceding gene: 186475872

Following gene: 186475869

Centisome position: 36.01

GC content: 63.65

Gene sequence:

>1857_bases
ATGGCAACGCTTCCTCTCACGGCCGACGACCAACTTCAATCATTGCCGGAGCATACCGCTCGACTCACGACGCGCAGCTC
TGCGATACACGCATCCCGAAGCAATACGCCGGGCCAGGCACCGGCCGGTTGTCACGGAGAAGGCGGTTCTCACCCGCTGC
TTTCGCGCGACGCGCTTGACCTCGCGGCGCATGCGGGTGTCGCCGCGCTAACGGGCGGCCTGTCCCCGACGTCCGTGGCG
CTTGCCTTCCTGGATTGGGCGTTGCACATGGCAGTCGCGCCTGGGAGGATGCTGGAGCTTTCTGGCGAGGCCCTCCTGGC
GAGCACGGAAGCTGCCCAGGGCGCGATGCGTACAAGCGTCGCCCGTCCGAAGCATGGACACGCGCCCGAGGATCCGCGCT
TCGCAGATGACGCCTGGGCGGTCTGGCCGTTTCATGTGTATCGCGACGGATTTCTCAGAATCCAGCACTGGTGGGAGATT
GCGACGACGGCCATACCGGGCGTCGAACAGCATCACGAGGAACTGGTGCGGTTCCTCGCTCGCCAATGGCTGGATGCGTG
CGCTCCCAGCAACTTCATCGCCACCAATCCCGTGGTGCAGCGGGCGGCATGGTCGAGCGGGGGTACGAGCTTTGTCACGG
GGGCGATGCACTGGCTTGCCGATCTGCGCGATCTTATGCAGGGCGGCTCCGGCGGCCAGCACGCGCGCCCGTCCACCTGG
CTGCCGGGCAAGCACGTCGCCATCACACCCGGCAAGGTCGTCTGGCGCAGCGAGTTATGCGAATTGCTACAGTACGCGCC
GACGACATCAATGGTCGCGAAAGAACCCATCCTGATCGTGCCGTCGTGGATCATGAAGTACTACATTCTCGATCTTCAGC
CACACGATTCGTTGATCCGCTATCTCGTGGACGCCGGCTATACCGTCTACACGATTTCGTGGCGCAACCCCGGTGAATCG
TTCCGTGACGTCGGACTCGACGCGTACCTGCAGGAAGGGTTGCTCGCAGCCCTCGCGCAAGTGCGCGAGCGTGACGCGCA
GCGGGTGCACGTGGTCGGCTATTGTCTCGGCGGAACCTTGCTCGCCATCGCGGCGGCGGCGCTCTTTCGCGATGGCAGAG
GAGATGAACTGAAAACCATGACACTGCTTGCCGCGCAGACGGATTTCACCGAACCCGGAGAGCTTGGACTTTTCATCGAC
GCCAGCGAACTCGCGGCACTCGATGCGTTGATGTGGCGGCAGGGCTATCTCGACGGCTCGCAGATGTCGGCGGCATTTCA
ACTGCTCAAAGCACGGGATCTGGTCTGGTCGCGACTGATGAGCGAGTATCTGCTCGGCCGCCGTTCGCAAGCGAATGACC
TGATGGCATGGAACGCCGATACGACCCGCCTGCCTTACCGGATGCACAGCGAGTATCTGACCTGCCTTTTTCTCAACAAC
GATCTGGCGGAAGGACGCTATTGCGTCGGCGGCCGGCCTGTTGCGCTGTCCGACATCGAAGCGCCGGCGTTCGTCGTCGG
CACCGAGCGCGACCATGTTTCGCCGTGGCGCTCGGTCTACAAGCTTCACCTGCTCACGCACAACGAACTGACGTTTCTGC
TGACGGCGGGCGGACACAACGCAGGCATCGTGTCGCAGCCGGGACATCCCGAGCGCTATTACCGCTGCGCAACGAGAGCA
GCCGCAGAGCCATATCGCGGCAGACAGGAGTTCCTCTCAGCCACCGAACCCGTCGATGGCTCATGGTGGCCGAGATGGAA
TGCGTGGCTGCGCGACCATTCGGACGGCGAGGTGGCCGGACGCGCGATCGTCGACGGACTGGAAGACGCGCCGGGCACCT
ACGTGTTCGAGCGGTAG

Upstream 100 bases:

>100_bases
AAAGTTGCAGGCTCTTTTTCAGGCCTGACGCAAGTCAGGTGTTCGAGTCCATGCCCGCGTAACGCAGGCATGGTTCTGTG
GCGAGATCAACCGAACGACG

Downstream 100 bases:

>100_bases
CCGCGCGGCTGCACCGGGCGCGACGTCAACTCAAACGCGGCGCACGTCAAAGCGATTCGAGTTCAACCGTCTGTTGGTAG
ACGGGAACCTCGCACGACCA

Product: poly-beta-hydroxybutyrate polymerase domain-containing protein

Products: NA

Alternate protein names: PHA polymerase; PHA synthase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 618; Mature: 617

Protein sequence:

>618_residues
MATLPLTADDQLQSLPEHTARLTTRSSAIHASRSNTPGQAPAGCHGEGGSHPLLSRDALDLAAHAGVAALTGGLSPTSVA
LAFLDWALHMAVAPGRMLELSGEALLASTEAAQGAMRTSVARPKHGHAPEDPRFADDAWAVWPFHVYRDGFLRIQHWWEI
ATTAIPGVEQHHEELVRFLARQWLDACAPSNFIATNPVVQRAAWSSGGTSFVTGAMHWLADLRDLMQGGSGGQHARPSTW
LPGKHVAITPGKVVWRSELCELLQYAPTTSMVAKEPILIVPSWIMKYYILDLQPHDSLIRYLVDAGYTVYTISWRNPGES
FRDVGLDAYLQEGLLAALAQVRERDAQRVHVVGYCLGGTLLAIAAAALFRDGRGDELKTMTLLAAQTDFTEPGELGLFID
ASELAALDALMWRQGYLDGSQMSAAFQLLKARDLVWSRLMSEYLLGRRSQANDLMAWNADTTRLPYRMHSEYLTCLFLNN
DLAEGRYCVGGRPVALSDIEAPAFVVGTERDHVSPWRSVYKLHLLTHNELTFLLTAGGHNAGIVSQPGHPERYYRCATRA
AAEPYRGRQEFLSATEPVDGSWWPRWNAWLRDHSDGEVAGRAIVDGLEDAPGTYVFER

Sequences:

>Translated_618_residues
MATLPLTADDQLQSLPEHTARLTTRSSAIHASRSNTPGQAPAGCHGEGGSHPLLSRDALDLAAHAGVAALTGGLSPTSVA
LAFLDWALHMAVAPGRMLELSGEALLASTEAAQGAMRTSVARPKHGHAPEDPRFADDAWAVWPFHVYRDGFLRIQHWWEI
ATTAIPGVEQHHEELVRFLARQWLDACAPSNFIATNPVVQRAAWSSGGTSFVTGAMHWLADLRDLMQGGSGGQHARPSTW
LPGKHVAITPGKVVWRSELCELLQYAPTTSMVAKEPILIVPSWIMKYYILDLQPHDSLIRYLVDAGYTVYTISWRNPGES
FRDVGLDAYLQEGLLAALAQVRERDAQRVHVVGYCLGGTLLAIAAAALFRDGRGDELKTMTLLAAQTDFTEPGELGLFID
ASELAALDALMWRQGYLDGSQMSAAFQLLKARDLVWSRLMSEYLLGRRSQANDLMAWNADTTRLPYRMHSEYLTCLFLNN
DLAEGRYCVGGRPVALSDIEAPAFVVGTERDHVSPWRSVYKLHLLTHNELTFLLTAGGHNAGIVSQPGHPERYYRCATRA
AAEPYRGRQEFLSATEPVDGSWWPRWNAWLRDHSDGEVAGRAIVDGLEDAPGTYVFER
>Mature_617_residues
ATLPLTADDQLQSLPEHTARLTTRSSAIHASRSNTPGQAPAGCHGEGGSHPLLSRDALDLAAHAGVAALTGGLSPTSVAL
AFLDWALHMAVAPGRMLELSGEALLASTEAAQGAMRTSVARPKHGHAPEDPRFADDAWAVWPFHVYRDGFLRIQHWWEIA
TTAIPGVEQHHEELVRFLARQWLDACAPSNFIATNPVVQRAAWSSGGTSFVTGAMHWLADLRDLMQGGSGGQHARPSTWL
PGKHVAITPGKVVWRSELCELLQYAPTTSMVAKEPILIVPSWIMKYYILDLQPHDSLIRYLVDAGYTVYTISWRNPGESF
RDVGLDAYLQEGLLAALAQVRERDAQRVHVVGYCLGGTLLAIAAAALFRDGRGDELKTMTLLAAQTDFTEPGELGLFIDA
SELAALDALMWRQGYLDGSQMSAAFQLLKARDLVWSRLMSEYLLGRRSQANDLMAWNADTTRLPYRMHSEYLTCLFLNND
LAEGRYCVGGRPVALSDIEAPAFVVGTERDHVSPWRSVYKLHLLTHNELTFLLTAGGHNAGIVSQPGHPERYYRCATRAA
AEPYRGRQEFLSATEPVDGSWWPRWNAWLRDHSDGEVAGRAIVDGLEDAPGTYVFER

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 67973; Mature: 67841

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLPLTADDQLQSLPEHTARLTTRSSAIHASRSNTPGQAPAGCHGEGGSHPLLSRDALD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAAHAGVAALTGGLSPTSVALAFLDWALHMAVAPGRMLELSGEALLASTEAAQGAMRTSV
HHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHC
ARPKHGHAPEDPRFADDAWAVWPFHVYRDGFLRIQHWWEIATTAIPGVEQHHEELVRFLA
CCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHH
RQWLDACAPSNFIATNPVVQRAAWSSGGTSFVTGAMHWLADLRDLMQGGSGGQHARPSTW
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPGKHVAITPGKVVWRSELCELLQYAPTTSMVAKEPILIVPSWIMKYYILDLQPHDSLIR
CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHEEEEECCCHHHHHH
YLVDAGYTVYTISWRNPGESFRDVGLDAYLQEGLLAALAQVRERDAQRVHVVGYCLGGTL
HHHHCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHH
LAIAAAALFRDGRGDELKTMTLLAAQTDFTEPGELGLFIDASELAALDALMWRQGYLDGS
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCH
QMSAAFQLLKARDLVWSRLMSEYLLGRRSQANDLMAWNADTTRLPYRMHSEYLTCLFLNN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCEEEEEEECC
DLAEGRYCVGGRPVALSDIEAPAFVVGTERDHVSPWRSVYKLHLLTHNELTFLLTAGGHN
CCCCCEEEECCCCEEEECCCCCEEEEECCCCCCCHHHHHHEEEEEEECCEEEEEEECCCC
AGIVSQPGHPERYYRCATRAAAEPYRGRQEFLSATEPVDGSWWPRWNAWLRDHSDGEVAG
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHH
RAIVDGLEDAPGTYVFER
HHHHCCCCCCCCCEEECC
>Mature Secondary Structure 
ATLPLTADDQLQSLPEHTARLTTRSSAIHASRSNTPGQAPAGCHGEGGSHPLLSRDALD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAAHAGVAALTGGLSPTSVALAFLDWALHMAVAPGRMLELSGEALLASTEAAQGAMRTSV
HHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECHHHHHHHHHHC
ARPKHGHAPEDPRFADDAWAVWPFHVYRDGFLRIQHWWEIATTAIPGVEQHHEELVRFLA
CCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHH
RQWLDACAPSNFIATNPVVQRAAWSSGGTSFVTGAMHWLADLRDLMQGGSGGQHARPSTW
HHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPGKHVAITPGKVVWRSELCELLQYAPTTSMVAKEPILIVPSWIMKYYILDLQPHDSLIR
CCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHCCCEEEECHHHHHEEEEECCCHHHHHH
YLVDAGYTVYTISWRNPGESFRDVGLDAYLQEGLLAALAQVRERDAQRVHVVGYCLGGTL
HHHHCCCEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHH
LAIAAAALFRDGRGDELKTMTLLAAQTDFTEPGELGLFIDASELAALDALMWRQGYLDGS
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCH
QMSAAFQLLKARDLVWSRLMSEYLLGRRSQANDLMAWNADTTRLPYRMHSEYLTCLFLNN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCEEEEEEECC
DLAEGRYCVGGRPVALSDIEAPAFVVGTERDHVSPWRSVYKLHLLTHNELTFLLTAGGHN
CCCCCEEEECCCCEEEECCCCCEEEEECCCCCCCHHHHHHEEEEEEECCEEEEEEECCCC
AGIVSQPGHPERYYRCATRAAAEPYRGRQEFLSATEPVDGSWWPRWNAWLRDHSDGEVAG
CCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHH
RAIVDGLEDAPGTYVFER
HHHHCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7763712 [H]