| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475853
Identifier: 186475853
GI number: 186475853
Start: 1227658
End: 1228515
Strand: Direct
Name: 186475853
Synonym: Bphy_1088
Alternate gene names: NA
Gene position: 1227658-1228515 (Clockwise)
Preceding gene: 186475849
Following gene: 186475854
Centisome position: 35.29
GC content: 59.44
Gene sequence:
>858_bases ATGCAGGTATCGGCTCAGGAACTCGAGCCGCGCGCCTATTCACCCGCTCCCGTCGGCACCAACTTCGTTGGACTCACGTA TTCGTGGCTGGGAGGACAGGTCCTCGTCGATTCGTCATTGCCCATCAGCGATGTCCATGCAAACATCAATTCTGCATCCG CTGCATACGTGCACGTATTCAACCTTGCCGGCCGCGCCGCTTCGCTTGCCGTACTCGCGCCGTTCATTAGCGGCGACATC TCCGGCAACGTCTTCGACGCACCGAATCGAGTGCATCGCGCCGGCCTGGGTGATCTCCGATTCAGGCTTTCGATCGATCT GCTCGGTGGTCCTGCACTGACTCCAGAAGAATTCGCACGCCGCACACCGGACACGATCATCGGCACGAGCCTGATGGTCA TTGCGCCGACGGGACAATATGAATCGGCGCATCTTGTGAACGTCGGCAGTAATCGATGGGCATTTAAACCGGAGGTCGGC GTTTCGCAGCCGCTCGGCAACTGGTTCGCTGAAGCGACAGCGGGCGTCTGGTTTTTCACGGATAACACGTCGTTTCTCGG CAGCAAGCGACGTAGTCAGGCGCCGCTCGGCGTGCTCCAGCTGCATGGCGGATACCTGTTCCGCCCGGGGTTGTGGTTGG CCGCCGATGCGGGCTTCTATACGGGCGGGGCGACCTCCGTCAACGGGATCACCAACGACGACGCTCAAAACAATGCGCGC TATGGACTGACGCTTTCGCTTCCGATAACGCGCGACTGGTCAGCCAAGCTCGCCGTGTCAAACGGCTTTATGGTCAGAGC GGGAGGAAACTACAAGTCCATCTCCCTGACACTGCAATATCGGTGGTTCAACCGCTAA
Upstream 100 bases:
>100_bases GGCGCAGTCACGCGCAGGTCCAGCTCGTGGGGTCTCGCGTTCATTGCGCACGCGCGACTGGTGCGCAGCGTCCGTCGCTT CGTGCCTTCTTCTCACCGTC
Downstream 100 bases:
>100_bases GCCATCTCCGACGAAGTCCCGCTATCCATCGTGGTGGGTCCCTTTCGCTGCCTGAATCGCGAAGCGCGGATCATCTGTTG ACTAAGGTCAACCGAAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQVSAQELEPRAYSPAPVGTNFVGLTYSWLGGQVLVDSSLPISDVHANINSASAAYVHVFNLAGRAASLAVLAPFISGDI SGNVFDAPNRVHRAGLGDLRFRLSIDLLGGPALTPEEFARRTPDTIIGTSLMVIAPTGQYESAHLVNVGSNRWAFKPEVG VSQPLGNWFAEATAGVWFFTDNTSFLGSKRRSQAPLGVLQLHGGYLFRPGLWLAADAGFYTGGATSVNGITNDDAQNNAR YGLTLSLPITRDWSAKLAVSNGFMVRAGGNYKSISLTLQYRWFNR
Sequences:
>Translated_285_residues MQVSAQELEPRAYSPAPVGTNFVGLTYSWLGGQVLVDSSLPISDVHANINSASAAYVHVFNLAGRAASLAVLAPFISGDI SGNVFDAPNRVHRAGLGDLRFRLSIDLLGGPALTPEEFARRTPDTIIGTSLMVIAPTGQYESAHLVNVGSNRWAFKPEVG VSQPLGNWFAEATAGVWFFTDNTSFLGSKRRSQAPLGVLQLHGGYLFRPGLWLAADAGFYTGGATSVNGITNDDAQNNAR YGLTLSLPITRDWSAKLAVSNGFMVRAGGNYKSISLTLQYRWFNR >Mature_285_residues MQVSAQELEPRAYSPAPVGTNFVGLTYSWLGGQVLVDSSLPISDVHANINSASAAYVHVFNLAGRAASLAVLAPFISGDI SGNVFDAPNRVHRAGLGDLRFRLSIDLLGGPALTPEEFARRTPDTIIGTSLMVIAPTGQYESAHLVNVGSNRWAFKPEVG VSQPLGNWFAEATAGVWFFTDNTSFLGSKRRSQAPLGVLQLHGGYLFRPGLWLAADAGFYTGGATSVNGITNDDAQNNAR YGLTLSLPITRDWSAKLAVSNGFMVRAGGNYKSISLTLQYRWFNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30582; Mature: 30582
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSAQELEPRAYSPAPVGTNFVGLTYSWLGGQVLVDSSLPISDVHANINSASAAYVHVF CCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCCEEEEEEE NLAGRAASLAVLAPFISGDISGNVFDAPNRVHRAGLGDLRFRLSIDLLGGPALTPEEFAR ECCCCHHEEEEEEHHHCCCCCCCEECCCCHHHHCCCCCEEEEEEEEEECCCCCCHHHHHH RTPDTIIGTSLMVIAPTGQYESAHLVNVGSNRWAFKPEVGVSQPLGNWFAEATAGVWFFT CCCCCEECCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHCEEEEEE DNTSFLGSKRRSQAPLGVLQLHGGYLFRPGLWLAADAGFYTGGATSVNGITNDDAQNNAR CCCHHHCCCCCCCCCEEEEEECCCEEECCCEEEEECCCEECCCCCEECCCCCCCCCCCCE YGLTLSLPITRDWSAKLAVSNGFMVRAGGNYKSISLTLQYRWFNR EEEEEEEEECCCCCEEEEECCCEEEEECCCEEEEEEEEEEEEECC >Mature Secondary Structure MQVSAQELEPRAYSPAPVGTNFVGLTYSWLGGQVLVDSSLPISDVHANINSASAAYVHVF CCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCHHHHCCCCCCCCEEEEEEE NLAGRAASLAVLAPFISGDISGNVFDAPNRVHRAGLGDLRFRLSIDLLGGPALTPEEFAR ECCCCHHEEEEEEHHHCCCCCCCEECCCCHHHHCCCCCEEEEEEEEEECCCCCCHHHHHH RTPDTIIGTSLMVIAPTGQYESAHLVNVGSNRWAFKPEVGVSQPLGNWFAEATAGVWFFT CCCCCEECCEEEEEEECCCCCCEEEEEECCCCEEECCCCCCCCCHHHHHHHHHCEEEEEE DNTSFLGSKRRSQAPLGVLQLHGGYLFRPGLWLAADAGFYTGGATSVNGITNDDAQNNAR CCCHHHCCCCCCCCCEEEEEECCCEEECCCEEEEECCCEECCCCCEECCCCCCCCCCCCE YGLTLSLPITRDWSAKLAVSNGFMVRAGGNYKSISLTLQYRWFNR EEEEEEEEECCCCCEEEEECCCEEEEECCCEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA