| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475843
Identifier: 186475843
GI number: 186475843
Start: 1214459
End: 1215127
Strand: Reverse
Name: 186475843
Synonym: Bphy_1078
Alternate gene names: NA
Gene position: 1215127-1214459 (Counterclockwise)
Preceding gene: 186475844
Following gene: 186475840
Centisome position: 34.93
GC content: 66.67
Gene sequence:
>669_bases ATGCATCGCCCGTTTGCGGATCGCGCTGACGCGGGCCGCGCGCTCGCGGCACATCTGCAGCACTACGCACGACGCAACGA CGTCGTCGTGCTCGGCTTGCCGCGCGGCGGCGTCCCCGTGGCGTATGAGGTCGCATGCGCGCTCGACGCGCCGCTCGATG TACTGGTCGTGCGCAAGCTTGGCGTGCCGTGGCAACGCGAACTCGCGATGGGTGCGATCGCGTCGGGCGACGCGTTGTAT GTGAATGAAGAACTGCTGCGCGAGACGGACGTCGGCCAGCCCGAATTCGAGCGCGTGCTAGCGGAGGAAAAGGCGCAGCT TGCGCGACGCGAAGCACTGTTTCGCGACCCGCAGCGCGCGCATGTCGACGTGGCGAACCGTATCGCGATCGTCGTCGACG ATGGACTCGCGACGGGCGCCTCGATGACCGCGGCCGCGCGCGCATTGCGCACACGCGCACCCGTGAAGATCGTCGCCGCG CTGCCCGTTGCACCTTACGATGCGCAGGCGCGCATCGGCAGCGACGTCGATGAATTCGTCTGCGTGCTGACGCCGGAACA TTTCTTCAGCGTCAGCCAGTTCTATTCCGACTTCAGCGAAACCACCGACGACGATGTGCGCGCAATACTCGCTCGCGCAT CGTCGGCCAGCGGGTCCCCTTCGTCGTGA
Upstream 100 bases:
>100_bases AGCGGCCCTCACGCGCGTGTTGCGGCCGCTGCAGGAGTCGGCACTTTCGATGCTCAACGTCCTATAGTGAAGTGCAGGGA TAGCGACGTGGGAGCGAGTC
Downstream 100 bases:
>100_bases AGGCGCGGGCGCGCGTGCCCGCGCACCCGCAGCGCGACGGCGCATGGAGGCGCCGTCGCCGCCGCTGGCATTGCTTTCAG GCAGCCGCTGCCGTCAGATG
Product: phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MHRPFADRADAGRALAAHLQHYARRNDVVVLGLPRGGVPVAYEVACALDAPLDVLVVRKLGVPWQRELAMGAIASGDALY VNEELLRETDVGQPEFERVLAEEKAQLARREALFRDPQRAHVDVANRIAIVVDDGLATGASMTAAARALRTRAPVKIVAA LPVAPYDAQARIGSDVDEFVCVLTPEHFFSVSQFYSDFSETTDDDVRAILARASSASGSPSS
Sequences:
>Translated_222_residues MHRPFADRADAGRALAAHLQHYARRNDVVVLGLPRGGVPVAYEVACALDAPLDVLVVRKLGVPWQRELAMGAIASGDALY VNEELLRETDVGQPEFERVLAEEKAQLARREALFRDPQRAHVDVANRIAIVVDDGLATGASMTAAARALRTRAPVKIVAA LPVAPYDAQARIGSDVDEFVCVLTPEHFFSVSQFYSDFSETTDDDVRAILARASSASGSPSS >Mature_222_residues MHRPFADRADAGRALAAHLQHYARRNDVVVLGLPRGGVPVAYEVACALDAPLDVLVVRKLGVPWQRELAMGAIASGDALY VNEELLRETDVGQPEFERVLAEEKAQLARREALFRDPQRAHVDVANRIAIVVDDGLATGASMTAAARALRTRAPVKIVAA LPVAPYDAQARIGSDVDEFVCVLTPEHFFSVSQFYSDFSETTDDDVRAILARASSASGSPSS
Specific function: Unknown
COG id: COG1926
COG function: function code R; Predicted phosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 - InterPro: IPR000836 [H]
Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 23948; Mature: 23948
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRPFADRADAGRALAAHLQHYARRNDVVVLGLPRGGVPVAYEVACALDAPLDVLVVRKL CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEEEECCCCCHHHHHHHHC GVPWQRELAMGAIASGDALYVNEELLRETDVGQPEFERVLAEEKAQLARREALFRDPQRA CCCHHHHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH HVDVANRIAIVVDDGLATGASMTAAARALRTRAPVKIVAALPVAPYDAQARIGSDVDEFV HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHHEE CVLTPEHFFSVSQFYSDFSETTDDDVRAILARASSASGSPSS EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHRPFADRADAGRALAAHLQHYARRNDVVVLGLPRGGVPVAYEVACALDAPLDVLVVRKL CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHEEEEECCCCCHHHHHHHHC GVPWQRELAMGAIASGDALYVNEELLRETDVGQPEFERVLAEEKAQLARREALFRDPQRA CCCHHHHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH HVDVANRIAIVVDDGLATGASMTAAARALRTRAPVKIVAALPVAPYDAQARIGSDVDEFV HHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCHHHEE CVLTPEHFFSVSQFYSDFSETTDDDVRAILARASSASGSPSS EEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]