| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475840
Identifier: 186475840
GI number: 186475840
Start: 1211640
End: 1212830
Strand: Reverse
Name: 186475840
Synonym: Bphy_1075
Alternate gene names: NA
Gene position: 1212830-1211640 (Counterclockwise)
Preceding gene: 186475843
Following gene: 186475836
Centisome position: 34.86
GC content: 62.13
Gene sequence:
>1191_bases ATGAGCGAAACCGCACTGGACGCCACCGGCTCGTCCCTGTCCTTCGCAGCGGCGGCGCGCAGCGCAACAAACGTCGCCGA CAAGGAACACGTCATCGACGCGATGCGCGGATTCGCCGCGCTGCTGGTGGCGTATTTTCATTGCCGCCAGGTCGAATGGA TCGGCATGCAGAGCTTTCATCGCGTCGCCGGCAAGTCGCTCGATCTGAACACGATCGTCGCGTACCTTACCTTGCCAATT GCATGGGGCTCCGCAGGCGTGCCGATTTTTTTCGTCATCAGCGGCTATTGCATACATCGCAGCGCGGCGCAGCGCCTCGC GGCGTTCCCCGACTATCGGCTCGACGCGATGAACTTCTGGGCGCGTCGCCTCGCGCGCATTTATCCCGTGCTCATCGCCG CCCTGCTGCTCACGCTGGCGCTCGACTGGACGAGCCTGCAGTTTCCGCCCGTCAATCACAAGATTCTCGACATCGGCCCC CGGGCCTTCCTCGTCAACCTGTTCTCGCTGCAAGGCGTAGCCGGCAAGACCTATGGCTCCAACGGCGCGCTGTGGACACT GTCGCTCGAAGTGCAGTTCTATGCCGTGTATCCGCTGCTTTTTGCGTTGCGCCGGCGCCTCGGCCTGCCTGTCGTGCTGG GTCTGGTTGCCCTCGTCAATCTCGCATCCTTCTTCGTGTTCGAACGCCGCGACCTGCAGTTCTTCACCTCGTTCTGGCTC TCGTGGACGCTTGGCGCATGGATCGCCGAAGCGCAGGTCACGCGGGTCAAACACGACGCGCGGGACAGCCGCATGTCGTG GCCGATGGTCGGTGCGGCGGCATTGCTGACGGCGCTGGGCTGCGTCGCGTTTCACTTCGGCCAGTTCTACGCGTTCCAGT TGTGGGCGCTCGGCTTCGCGTGCTACCTGAACGAAGCGCTCAAGAGCCGTCGACATAACGACACACCCGCGATCCGGCTG CTGTCGCGCTTCGGCGATTTCAGCTTCTCGCTGTATTCGATCCATCTGCCTGTCTTCGTATTGCTGTCGACGCTGCTGTA TCGCTCGGCGCTGCAAATGTCGATCTTTCCGACCTTCGCTTTCATGCTCGTCGCGCTTGCCGTAGCATGGGTCTTCTATC GCTGCATCGAACTGCCGGCGATGAAGTGGTCCGCCAGTCTCAAGCCTGCAGGTGCGAAACGGCTGCGATAA
Upstream 100 bases:
>100_bases TCATTCGCCTACCATTCGCCTACGATATGCACGCGGACGCGCGGCCCGCCTGCCAAGCCGTGCGCCCATTCATTCATTCA TCAACGAACAAGGACCGCGT
Downstream 100 bases:
>100_bases CGGTACAGGCAGTTCAGGCGGTTGCGGCAAAAAGAAAGGCCGGCGCGATACAGATCGCACCGGCCTTTTTCCTTCCTGGT CAGCTTGCGAGCTTCTTGCG
Product: acyltransferase 3
Products: NA
Alternate protein names: Lipopolysaccharide Biosynthesis- Related Membrane Protein; Acyltransferase Family Protein; O-Antigen Acetylase
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MSETALDATGSSLSFAAAARSATNVADKEHVIDAMRGFAALLVAYFHCRQVEWIGMQSFHRVAGKSLDLNTIVAYLTLPI AWGSAGVPIFFVISGYCIHRSAAQRLAAFPDYRLDAMNFWARRLARIYPVLIAALLLTLALDWTSLQFPPVNHKILDIGP RAFLVNLFSLQGVAGKTYGSNGALWTLSLEVQFYAVYPLLFALRRRLGLPVVLGLVALVNLASFFVFERRDLQFFTSFWL SWTLGAWIAEAQVTRVKHDARDSRMSWPMVGAAALLTALGCVAFHFGQFYAFQLWALGFACYLNEALKSRRHNDTPAIRL LSRFGDFSFSLYSIHLPVFVLLSTLLYRSALQMSIFPTFAFMLVALAVAWVFYRCIELPAMKWSASLKPAGAKRLR
Sequences:
>Translated_396_residues MSETALDATGSSLSFAAAARSATNVADKEHVIDAMRGFAALLVAYFHCRQVEWIGMQSFHRVAGKSLDLNTIVAYLTLPI AWGSAGVPIFFVISGYCIHRSAAQRLAAFPDYRLDAMNFWARRLARIYPVLIAALLLTLALDWTSLQFPPVNHKILDIGP RAFLVNLFSLQGVAGKTYGSNGALWTLSLEVQFYAVYPLLFALRRRLGLPVVLGLVALVNLASFFVFERRDLQFFTSFWL SWTLGAWIAEAQVTRVKHDARDSRMSWPMVGAAALLTALGCVAFHFGQFYAFQLWALGFACYLNEALKSRRHNDTPAIRL LSRFGDFSFSLYSIHLPVFVLLSTLLYRSALQMSIFPTFAFMLVALAVAWVFYRCIELPAMKWSASLKPAGAKRLR >Mature_395_residues SETALDATGSSLSFAAAARSATNVADKEHVIDAMRGFAALLVAYFHCRQVEWIGMQSFHRVAGKSLDLNTIVAYLTLPIA WGSAGVPIFFVISGYCIHRSAAQRLAAFPDYRLDAMNFWARRLARIYPVLIAALLLTLALDWTSLQFPPVNHKILDIGPR AFLVNLFSLQGVAGKTYGSNGALWTLSLEVQFYAVYPLLFALRRRLGLPVVLGLVALVNLASFFVFERRDLQFFTSFWLS WTLGAWIAEAQVTRVKHDARDSRMSWPMVGAAALLTALGCVAFHFGQFYAFQLWALGFACYLNEALKSRRHNDTPAIRLL SRFGDFSFSLYSIHLPVFVLLSTLLYRSALQMSIFPTFAFMLVALAVAWVFYRCIELPAMKWSASLKPAGAKRLR
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44278; Mature: 44147
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETALDATGSSLSFAAAARSATNVADKEHVIDAMRGFAALLVAYFHCRQVEWIGMQSFH CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RVAGKSLDLNTIVAYLTLPIAWGSAGVPIFFVISGYCIHRSAAQRLAAFPDYRLDAMNFW HHHCCCCCHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCCHHHHHHH ARRLARIYPVLIAALLLTLALDWTSLQFPPVNHKILDIGPRAFLVNLFSLQGVAGKTYGS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC NGALWTLSLEVQFYAVYPLLFALRRRLGLPVVLGLVALVNLASFFVFERRDLQFFTSFWL CCCEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWTLGAWIAEAQVTRVKHDARDSRMSWPMVGAAALLTALGCVAFHFGQFYAFQLWALGFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYLNEALKSRRHNDTPAIRLLSRFGDFSFSLYSIHLPVFVLLSTLLYRSALQMSIFPTFA HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMLVALAVAWVFYRCIELPAMKWSASLKPAGAKRLR HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure SETALDATGSSLSFAAAARSATNVADKEHVIDAMRGFAALLVAYFHCRQVEWIGMQSFH CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH RVAGKSLDLNTIVAYLTLPIAWGSAGVPIFFVISGYCIHRSAAQRLAAFPDYRLDAMNFW HHHCCCCCHHHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCCHHHHHHH ARRLARIYPVLIAALLLTLALDWTSLQFPPVNHKILDIGPRAFLVNLFSLQGVAGKTYGS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCC NGALWTLSLEVQFYAVYPLLFALRRRLGLPVVLGLVALVNLASFFVFERRDLQFFTSFWL CCCEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWTLGAWIAEAQVTRVKHDARDSRMSWPMVGAAALLTALGCVAFHFGQFYAFQLWALGFA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYLNEALKSRRHNDTPAIRLLSRFGDFSFSLYSIHLPVFVLLSTLLYRSALQMSIFPTFA HHHHHHHHHCCCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FMLVALAVAWVFYRCIELPAMKWSASLKPAGAKRLR HHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA