Click here to switch to the map view.

The map label for this gene is lpsE [H]

Identifier: 186475839

GI number: 186475839

Start: 1209074

End: 1211560

Strand: Direct

Name: lpsE [H]

Synonym: Bphy_1074

Alternate gene names: 186475839

Gene position: 1209074-1211560 (Clockwise)

Preceding gene: 186475838

Following gene: 186475841

Centisome position: 34.75

GC content: 65.66

Gene sequence:

>2487_bases
ATGAACCACGATATCGTTGAAGAAGACCTGCTGCGCCCCACGCCCGTGAAGCGCGATGCAGGCCACGATCTCAACACGGC
CACGCCCGTCTCGAAGCCGCCCGCGCAACGGCGCGGCGCACGCAGCACCGGCCCCGTGCGCGTCGCCATCGTTCACGACT
GGCTCGTCACCTACGCGGGCGCCGAGCGGGTGCTCGAACAGATCGTCGCGTGCTTTCCGGACGCCGACCTGTTCAGCCTC
GTCGACTTTCTCGACGACCGCTCGTTCCTGCGCGGCAAGCCCGTGACGACCTCGTTCATCCAGAACCTGCCGATGGCGCG
CACGAAGTACCGCGCCTATCTGCCGCTGATGCCGCTCGCGATCGAACAGCTCGACGTGTCCGCCTACGACGTTGTGATTT
CGAGCAGCCATGCCGTCGCGAAGGGCGTGCTCACGGGACCGGACCAGGTGCATATCAGCTATGTGCATTCGCCCATCCGC
TACGCGTGGGATCTGCAGCATCAGTATCTGCAGCAGTCGGCGCTCACGCGCGGACCGAAGTCCGCGTTCGCGCGCGTGAT
CCTGCATTACATGCGCAACTGGGATATCCGCACGTCGAATTCCGTCGATACGTTCGTCGCAAACTCCGAGTTCATTTCGC
GCCGCATCCGCAAGGTATATCAACGCGAATCCGAAGTGATCTTTCCGCCCGTGGATGTCGAGGCGTTCGCGCTGTGCGAA
GCCAAGGAAGACTTCTATCTGACGGCATCGCGCATGGTGCCGTACAAGAAGATCGATCTGATTGTCGAGGCGTTCGCCCG
TATGCCCGAGCGCAGGCTCGTGGTGATCGGCGACGGTCCCGACATGCAGAAGGTGCGCGAGAAAGCGACGCCCAACGTGC
AGATTATGGGCTATCAGAAGTTCGACGTGCTGCGCGATCACATGCGTCGCGCGAAGGCGTTCGTGTTCGCCGCGGAAGAA
GATTTCGGCATTTCGGTGGTGGAAGCGCAGGCCTGCGGCACACCCGTCATCGCGTACGGCAAGGGCGGAGCGCTCGAAAC
CGTGCGCGACCCGTATGAATCGCATCCCACCGGCATTTTCTTCAGCGAGCAGACCACCGACTCGATCATCGATGCCGTGG
AGCATTTCGCCAGCGACCCGACCCGCTTCAAACCCGCCGACTGCCGCGCGAATGCCGAGCGCTTCTCGATCCGCCATTTC
CGCGAGCGCTTTTTCGGCTTCGTGCGCGAGACGGTGCCCGCATTGCGCGATGCGACGCTGCCGTCGGACGAACCGCCCGC
CCGCCGCAGCGAACAGGAGCGGTCATCGAGCGCGCTGCGCGTGCTCGCGATCGATCAGAGCGGCGTGCTGGGCGGCGCCG
AGCTCTCGCTGCTGGAAATCGTGAAGGCGCTCAAGGCGCGCGTGCAGGTGCTGCTGTTCGACGATGGCCCGTTCCACGCC
GCGCTGCGTCGCGAAGGCGTCGCCGTCGACGTGCTCGATCCCGGCGCGACACGCGACATTCGCAAGCAGGGCGGCACGCC
GCCGCTGGCCAAAGCGGTGAAGGGCGTGGCGTCGCTCGTGCGCGCGACGGTCGCGCGTGCCCGCCAGAGCGACGTGATCT
ACGCGAACACGCAGCGCGCGATGGTGATCGGCGCGCTCGCCGGCCGCCTCGCACGACGCCCGGTGGTCTGGCATCTGCGC
GATATCGTGAGCCCCGAGCACTTCGGCAGCAAGCAGCTCGCGATCATCAAGTGGTGCGCGAAACTGGGCCTTGCGCATGT
GATCGCCAATTCGGCCGCGTCGGCGCGCGCATTTGCGGACCTCACGCAGTTCGGCGACAAGCGCATCGACGTCGTGTTCA
ACGGCATTTCCAGCGCACCGTTCAACGCGCTGCGCGATGTGCCGCAAAGCGTGCTGCGCACGCGGCTGGACCTGCCGCAG
GATGCGTTCCTCGTCGGCTCGTTCAGCCGTCTCGCGCAATGGAAGGGGCAGCATGTGCTGCTCGAAGCGATGGTGCTCAA
TCCGCACATGCATGCCGTGCTGGTGGGCGCACCGCTCTTTGGCGAAGACGCCTATGAAGCGATGCTGCATGCGTTCGTCG
CGGCGCATGGACTTGAAGCGCGCGTGCATTTCCTCGGCTTTCAGGACGACGTGGCCGCGTGCATGTGCGCCGTCGATGTG
GTCGCGCATACGTCGATCACGCCAGAGCCGTTCGGTCGTGTGATCGTCGAAGGGATGCTCGCGCAGCGGCCCGTGGTGGC
GTCGCGCGCGGGCGGCGTGACGGAGATCATCGACGATGGCGTGAACGGCGTGATGTGCACGCCGGGCGACGCGCACGCGC
TCGCCGATACGCTCGCCGAACTGCGCTCGGATCAGGCCCTGCGCGACCGGCTCGTCGCGCGCGGCTATCAGACGGCCGTG
CGCAAGTTCGGCACTCAGGCGTATGTCGAAGGCGTCGAGCGGATTCTCGCGAACGTGGCGGGCGGGCGCAAGAAGCTCGC
AAGCTGA

Upstream 100 bases:

>100_bases
CGAACCTCGCATGGTCGCTCACGATGACCCCCGCATTGCGCGATCTTGCGCGCTCGCTGCTTGCGCGCCTGAAGGTGCGA
CTCAATCCGAGGAATAGCGC

Downstream 100 bases:

>100_bases
CCAGGAAGGAAAAAGGCCGGTGCGATCTGTATCGCGCCGGCCTTTCTTTTTGCCGCAACCGCCTGAACTGCCTGTACCGT
TATCGCAGCCGTTTCGCACC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 828; Mature: 828

Protein sequence:

>828_residues
MNHDIVEEDLLRPTPVKRDAGHDLNTATPVSKPPAQRRGARSTGPVRVAIVHDWLVTYAGAERVLEQIVACFPDADLFSL
VDFLDDRSFLRGKPVTTSFIQNLPMARTKYRAYLPLMPLAIEQLDVSAYDVVISSSHAVAKGVLTGPDQVHISYVHSPIR
YAWDLQHQYLQQSALTRGPKSAFARVILHYMRNWDIRTSNSVDTFVANSEFISRRIRKVYQRESEVIFPPVDVEAFALCE
AKEDFYLTASRMVPYKKIDLIVEAFARMPERRLVVIGDGPDMQKVREKATPNVQIMGYQKFDVLRDHMRRAKAFVFAAEE
DFGISVVEAQACGTPVIAYGKGGALETVRDPYESHPTGIFFSEQTTDSIIDAVEHFASDPTRFKPADCRANAERFSIRHF
RERFFGFVRETVPALRDATLPSDEPPARRSEQERSSSALRVLAIDQSGVLGGAELSLLEIVKALKARVQVLLFDDGPFHA
ALRREGVAVDVLDPGATRDIRKQGGTPPLAKAVKGVASLVRATVARARQSDVIYANTQRAMVIGALAGRLARRPVVWHLR
DIVSPEHFGSKQLAIIKWCAKLGLAHVIANSAASARAFADLTQFGDKRIDVVFNGISSAPFNALRDVPQSVLRTRLDLPQ
DAFLVGSFSRLAQWKGQHVLLEAMVLNPHMHAVLVGAPLFGEDAYEAMLHAFVAAHGLEARVHFLGFQDDVAACMCAVDV
VAHTSITPEPFGRVIVEGMLAQRPVVASRAGGVTEIIDDGVNGVMCTPGDAHALADTLAELRSDQALRDRLVARGYQTAV
RKFGTQAYVEGVERILANVAGGRKKLAS

Sequences:

>Translated_828_residues
MNHDIVEEDLLRPTPVKRDAGHDLNTATPVSKPPAQRRGARSTGPVRVAIVHDWLVTYAGAERVLEQIVACFPDADLFSL
VDFLDDRSFLRGKPVTTSFIQNLPMARTKYRAYLPLMPLAIEQLDVSAYDVVISSSHAVAKGVLTGPDQVHISYVHSPIR
YAWDLQHQYLQQSALTRGPKSAFARVILHYMRNWDIRTSNSVDTFVANSEFISRRIRKVYQRESEVIFPPVDVEAFALCE
AKEDFYLTASRMVPYKKIDLIVEAFARMPERRLVVIGDGPDMQKVREKATPNVQIMGYQKFDVLRDHMRRAKAFVFAAEE
DFGISVVEAQACGTPVIAYGKGGALETVRDPYESHPTGIFFSEQTTDSIIDAVEHFASDPTRFKPADCRANAERFSIRHF
RERFFGFVRETVPALRDATLPSDEPPARRSEQERSSSALRVLAIDQSGVLGGAELSLLEIVKALKARVQVLLFDDGPFHA
ALRREGVAVDVLDPGATRDIRKQGGTPPLAKAVKGVASLVRATVARARQSDVIYANTQRAMVIGALAGRLARRPVVWHLR
DIVSPEHFGSKQLAIIKWCAKLGLAHVIANSAASARAFADLTQFGDKRIDVVFNGISSAPFNALRDVPQSVLRTRLDLPQ
DAFLVGSFSRLAQWKGQHVLLEAMVLNPHMHAVLVGAPLFGEDAYEAMLHAFVAAHGLEARVHFLGFQDDVAACMCAVDV
VAHTSITPEPFGRVIVEGMLAQRPVVASRAGGVTEIIDDGVNGVMCTPGDAHALADTLAELRSDQALRDRLVARGYQTAV
RKFGTQAYVEGVERILANVAGGRKKLAS
>Mature_828_residues
MNHDIVEEDLLRPTPVKRDAGHDLNTATPVSKPPAQRRGARSTGPVRVAIVHDWLVTYAGAERVLEQIVACFPDADLFSL
VDFLDDRSFLRGKPVTTSFIQNLPMARTKYRAYLPLMPLAIEQLDVSAYDVVISSSHAVAKGVLTGPDQVHISYVHSPIR
YAWDLQHQYLQQSALTRGPKSAFARVILHYMRNWDIRTSNSVDTFVANSEFISRRIRKVYQRESEVIFPPVDVEAFALCE
AKEDFYLTASRMVPYKKIDLIVEAFARMPERRLVVIGDGPDMQKVREKATPNVQIMGYQKFDVLRDHMRRAKAFVFAAEE
DFGISVVEAQACGTPVIAYGKGGALETVRDPYESHPTGIFFSEQTTDSIIDAVEHFASDPTRFKPADCRANAERFSIRHF
RERFFGFVRETVPALRDATLPSDEPPARRSEQERSSSALRVLAIDQSGVLGGAELSLLEIVKALKARVQVLLFDDGPFHA
ALRREGVAVDVLDPGATRDIRKQGGTPPLAKAVKGVASLVRATVARARQSDVIYANTQRAMVIGALAGRLARRPVVWHLR
DIVSPEHFGSKQLAIIKWCAKLGLAHVIANSAASARAFADLTQFGDKRIDVVFNGISSAPFNALRDVPQSVLRTRLDLPQ
DAFLVGSFSRLAQWKGQHVLLEAMVLNPHMHAVLVGAPLFGEDAYEAMLHAFVAAHGLEARVHFLGFQDDVAACMCAVDV
VAHTSITPEPFGRVIVEGMLAQRPVVASRAGGVTEIIDDGVNGVMCTPGDAHALADTLAELRSDQALRDRLVARGYQTAV
RKFGTQAYVEGVERILANVAGGRKKLAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 91201; Mature: 91201

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDIVEEDLLRPTPVKRDAGHDLNTATPVSKPPAQRRGARSTGPVRVAIVHDWLVTYAG
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHH
AERVLEQIVACFPDADLFSLVDFLDDRSFLRGKPVTTSFIQNLPMARTKYRAYLPLMPLA
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHH
IEQLDVSAYDVVISSSHAVAKGVLTGPDQVHISYVHSPIRYAWDLQHQYLQQSALTRGPK
HHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHH
SAFARVILHYMRNWDIRTSNSVDTFVANSEFISRRIRKVYQRESEVIFPPVDVEAFALCE
HHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHCC
AKEDFYLTASRMVPYKKIDLIVEAFARMPERRLVVIGDGPDMQKVREKATPNVQIMGYQK
CCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEECHH
FDVLRDHMRRAKAFVFAAEEDFGISVVEAQACGTPVIAYGKGGALETVRDPYESHPTGIF
HHHHHHHHHHHHHEEEEECCCCCEEEEEHHHCCCCEEEECCCCCCHHHHCCHHCCCCEEE
FSEQTTDSIIDAVEHFASDPTRFKPADCRANAERFSIRHFRERFFGFVRETVPALRDATL
ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSDEPPARRSEQERSSSALRVLAIDQSGVLGGAELSLLEIVKALKARVQVLLFDDGPFHA
CCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHH
ALRREGVAVDVLDPGATRDIRKQGGTPPLAKAVKGVASLVRATVARARQSDVIYANTQRA
HHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
MVIGALAGRLARRPVVWHLRDIVSPEHFGSKQLAIIKWCAKLGLAHVIANSAASARAFAD
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LTQFGDKRIDVVFNGISSAPFNALRDVPQSVLRTRLDLPQDAFLVGSFSRLAQWKGQHVL
HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHCCCCEEE
LEAMVLNPHMHAVLVGAPLFGEDAYEAMLHAFVAAHGLEARVHFLGFQDDVAACMCAVDV
EEHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
VAHTSITPEPFGRVIVEGMLAQRPVVASRAGGVTEIIDDGVNGVMCTPGDAHALADTLAE
HHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHH
LRSDQALRDRLVARGYQTAVRKFGTQAYVEGVERILANVAGGRKKLAS
HHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure
MNHDIVEEDLLRPTPVKRDAGHDLNTATPVSKPPAQRRGARSTGPVRVAIVHDWLVTYAG
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEEHHHHHHHHH
AERVLEQIVACFPDADLFSLVDFLDDRSFLRGKPVTTSFIQNLPMARTKYRAYLPLMPLA
HHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCHHHHHHHHCCHHHHH
IEQLDVSAYDVVISSSHAVAKGVLTGPDQVHISYVHSPIRYAWDLQHQYLQQSALTRGPK
HHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHH
SAFARVILHYMRNWDIRTSNSVDTFVANSEFISRRIRKVYQRESEVIFPPVDVEAFALCE
HHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCCEECCCCCCHHHHHCC
AKEDFYLTASRMVPYKKIDLIVEAFARMPERRLVVIGDGPDMQKVREKATPNVQIMGYQK
CCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCEEEEECHH
FDVLRDHMRRAKAFVFAAEEDFGISVVEAQACGTPVIAYGKGGALETVRDPYESHPTGIF
HHHHHHHHHHHHHEEEEECCCCCEEEEEHHHCCCCEEEECCCCCCHHHHCCHHCCCCEEE
FSEQTTDSIIDAVEHFASDPTRFKPADCRANAERFSIRHFRERFFGFVRETVPALRDATL
ECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PSDEPPARRSEQERSSSALRVLAIDQSGVLGGAELSLLEIVKALKARVQVLLFDDGPFHA
CCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCCHHH
ALRREGVAVDVLDPGATRDIRKQGGTPPLAKAVKGVASLVRATVARARQSDVIYANTQRA
HHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHH
MVIGALAGRLARRPVVWHLRDIVSPEHFGSKQLAIIKWCAKLGLAHVIANSAASARAFAD
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LTQFGDKRIDVVFNGISSAPFNALRDVPQSVLRTRLDLPQDAFLVGSFSRLAQWKGQHVL
HHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHCCCCEEE
LEAMVLNPHMHAVLVGAPLFGEDAYEAMLHAFVAAHGLEARVHFLGFQDDVAACMCAVDV
EEHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
VAHTSITPEPFGRVIVEGMLAQRPVVASRAGGVTEIIDDGVNGVMCTPGDAHALADTLAE
HHHCCCCCCHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHH
LRSDQALRDRLVARGYQTAVRKFGTQAYVEGVERILANVAGGRKKLAS
HHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]