| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475817
Identifier: 186475817
GI number: 186475817
Start: 1180975
End: 1181421
Strand: Reverse
Name: 186475817
Synonym: Bphy_1052
Alternate gene names: NA
Gene position: 1181421-1180975 (Counterclockwise)
Preceding gene: 186475818
Following gene: 186475816
Centisome position: 33.96
GC content: 67.11
Gene sequence:
>447_bases ATGGTTGGGAGACACAAGAATCGCTGGTTGCGTCGTTGGCTGGTGGTGATCGTCTTTTGGGCAGTGCCCGTGGCGATCGT CGCCGTGCGGGAAATTCAGGAGGAGATGGCCTATAACCGGGTCGACCTGAACACCGCGCTCACGACCTGGCAGCTCACCG ACGCGCAACGCGCTGCAGGCGCCGCTGCGCGCTGCCACGGCACCCCCGACGATGCGCGCGCAGCCGGCTGCCCCGCCGAC GTGCTGGCCGCCAATGCCCCGCGCCAGCAGGACGCGCTCAACGAATACGCGGTCCGCAAGAGCACGCTGGCGAGCTATCT GTGGCATGCGTTCGTGGGCTATTGGGTCGTGCCCGCCGCGACGATCTTCGCGATCGGTTTCATCATTGGCGTGGTGCGGC GCGCGTTGCGGCGGCCGCCCGTCCACAAGAGTCCGGCCAATCACTAG
Upstream 100 bases:
>100_bases TCTATGATGGCGGCACAGACGGCCTATACCCCACACAGAACAAGTCCCACGGGCCGCCAGCTTGTCGTTGATGCCGCAAG CGCATCGCACGGAGGCAAGA
Downstream 100 bases:
>100_bases CCAGGCCAATGTCCGTTGGAAAAAACGCTGGCATAGCAACGCCGCTGCGGCTTTCCCGCAACACTTTCTGTTCACTTACA GCTGGTTTCGCGGCGACGCA
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MVGRHKNRWLRRWLVVIVFWAVPVAIVAVREIQEEMAYNRVDLNTALTTWQLTDAQRAAGAAARCHGTPDDARAAGCPAD VLAANAPRQQDALNEYAVRKSTLASYLWHAFVGYWVVPAATIFAIGFIIGVVRRALRRPPVHKSPANH
Sequences:
>Translated_148_residues MVGRHKNRWLRRWLVVIVFWAVPVAIVAVREIQEEMAYNRVDLNTALTTWQLTDAQRAAGAAARCHGTPDDARAAGCPAD VLAANAPRQQDALNEYAVRKSTLASYLWHAFVGYWVVPAATIFAIGFIIGVVRRALRRPPVHKSPANH >Mature_148_residues MVGRHKNRWLRRWLVVIVFWAVPVAIVAVREIQEEMAYNRVDLNTALTTWQLTDAQRAAGAAARCHGTPDDARAAGCPAD VLAANAPRQQDALNEYAVRKSTLASYLWHAFVGYWVVPAATIFAIGFIIGVVRRALRRPPVHKSPANH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16464; Mature: 16464
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGRHKNRWLRRWLVVIVFWAVPVAIVAVREIQEEMAYNRVDLNTALTTWQLTDAQRAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHC AAARCHGTPDDARAAGCPADVLAANAPRQQDALNEYAVRKSTLASYLWHAFVGYWVVPAA HHHHCCCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFAIGFIIGVVRRALRRPPVHKSPANH HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVGRHKNRWLRRWLVVIVFWAVPVAIVAVREIQEEMAYNRVDLNTALTTWQLTDAQRAAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHC AAARCHGTPDDARAAGCPADVLAANAPRQQDALNEYAVRKSTLASYLWHAFVGYWVVPAA HHHHCCCCCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIFAIGFIIGVVRRALRRPPVHKSPANH HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA