Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475805

Identifier: 186475805

GI number: 186475805

Start: 1169504

End: 1170325

Strand: Reverse

Name: 186475805

Synonym: Bphy_1040

Alternate gene names: NA

Gene position: 1170325-1169504 (Counterclockwise)

Preceding gene: 186475806

Following gene: 186475800

Centisome position: 33.64

GC content: 67.15

Gene sequence:

>822_bases
ATGTGTCTGATCGTGTTCGACTGGCGTCCTGACGCGTCCGATAGTCCGCTGTTCACGCTCACCGCGAATCGCGACGAATT
CCTGAAGCGCACAGCCCAGCCGATGCATTGGTGGGACGACGCTCCCGGCCTGCTGGCGGGCCGCGACCTGGTCGGCGGCG
GGACCTGGCTGGGCATGACACGCGACGGCCGGTTCGCTGCCCTCACTAACTATCGCGCGCCGAGCGAAATGCGCGCCGAT
GCGCCGACGCGTGGCACGCTGGTCAGCAACTGGCTGTCCGGCGAGCGCGGCATCGAAAGCGGCGCGCCGCTCGATTATCT
GCTGCGCGTCGCGCAAGACGGTGACATGTACAACGGCTTCAATCTGCTGGTCGGCGACTGGACGCGGCGCGAACTGGCCT
GGTATTGCAACCGCTCGCCTGCCGCGCCGGCGCTGCTCGCGCCGGGCACGCACGGCATCTCCAATGCAGTACTCGATACG
CCTTGGCCGAAGCTGGTGCGCAAGCGCGCCGAACTCGCACGGACGCTCGCCGACGACAGCCGTCCGCCGCTCACGACGCT
GATCGGCCTGATGCGCGATCCGCGTGTTGCACGCGACGACGAACTGCCCGCCACGGGAATATCGCTCGAACGCGAACGCG
CGCTGTCGGCCGCCTTCATCGATACGCCCGAATACGGCACACGCGGCACGACGGCAATGCAGGTCGTCGCGCAACACAAA
CGCCTGAGCGTGTCGGCACTCGAGCGCAGCGACGACAACGGCTCGCATCGCGTCAAACGCCCCGGCGATTACGAGCGCAG
CTTCACCTTCGACATCGCCTGA

Upstream 100 bases:

>100_bases
AGCCTCCCTTCGTTCACGTCGCCTTCGACGTCGCGCCTCCGACGCAGGCGCGACGCGTGGTTCCCGTATCCAGGCTGTCC
CGCTAAAGAGACTTTCGCTG

Downstream 100 bases:

>100_bases
CCGCGAGCCGGCTCATTCGCGGCTCACTCGATACCGAACGCCTCACGCAACGCCGCTGCCGCATCGGCATGCGCGCGCGC
CACGTCGGGCACGTAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MCLIVFDWRPDASDSPLFTLTANRDEFLKRTAQPMHWWDDAPGLLAGRDLVGGGTWLGMTRDGRFAALTNYRAPSEMRAD
APTRGTLVSNWLSGERGIESGAPLDYLLRVAQDGDMYNGFNLLVGDWTRRELAWYCNRSPAAPALLAPGTHGISNAVLDT
PWPKLVRKRAELARTLADDSRPPLTTLIGLMRDPRVARDDELPATGISLERERALSAAFIDTPEYGTRGTTAMQVVAQHK
RLSVSALERSDDNGSHRVKRPGDYERSFTFDIA

Sequences:

>Translated_273_residues
MCLIVFDWRPDASDSPLFTLTANRDEFLKRTAQPMHWWDDAPGLLAGRDLVGGGTWLGMTRDGRFAALTNYRAPSEMRAD
APTRGTLVSNWLSGERGIESGAPLDYLLRVAQDGDMYNGFNLLVGDWTRRELAWYCNRSPAAPALLAPGTHGISNAVLDT
PWPKLVRKRAELARTLADDSRPPLTTLIGLMRDPRVARDDELPATGISLERERALSAAFIDTPEYGTRGTTAMQVVAQHK
RLSVSALERSDDNGSHRVKRPGDYERSFTFDIA
>Mature_273_residues
MCLIVFDWRPDASDSPLFTLTANRDEFLKRTAQPMHWWDDAPGLLAGRDLVGGGTWLGMTRDGRFAALTNYRAPSEMRAD
APTRGTLVSNWLSGERGIESGAPLDYLLRVAQDGDMYNGFNLLVGDWTRRELAWYCNRSPAAPALLAPGTHGISNAVLDT
PWPKLVRKRAELARTLADDSRPPLTTLIGLMRDPRVARDDELPATGISLERERALSAAFIDTPEYGTRGTTAMQVVAQHK
RLSVSALERSDDNGSHRVKRPGDYERSFTFDIA

Specific function: Unknown

COG id: COG3332

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190570176, Length=273, Percent_Identity=33.6996336996337, Blast_Score=130, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30285; Mature: 30285

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLIVFDWRPDASDSPLFTLTANRDEFLKRTAQPMHWWDDAPGLLAGRDLVGGGTWLGMT
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCEECCEECCCCEEEEEC
RDGRFAALTNYRAPSEMRADAPTRGTLVSNWLSGERGIESGAPLDYLLRVAQDGDMYNGF
CCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCE
NLLVGDWTRRELAWYCNRSPAAPALLAPGTHGISNAVLDTPWPKLVRKRAELARTLADDS
EEEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
RPPLTTLIGLMRDPRVARDDELPATGISLERERALSAAFIDTPEYGTRGTTAMQVVAQHK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHH
RLSVSALERSDDNGSHRVKRPGDYERSFTFDIA
HCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MCLIVFDWRPDASDSPLFTLTANRDEFLKRTAQPMHWWDDAPGLLAGRDLVGGGTWLGMT
CEEEEEECCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCEECCEECCCCEEEEEC
RDGRFAALTNYRAPSEMRADAPTRGTLVSNWLSGERGIESGAPLDYLLRVAQDGDMYNGF
CCCCEEEEECCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCE
NLLVGDWTRRELAWYCNRSPAAPALLAPGTHGISNAVLDTPWPKLVRKRAELARTLADDS
EEEECCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
RPPLTTLIGLMRDPRVARDDELPATGISLERERALSAAFIDTPEYGTRGTTAMQVVAQHK
CCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHH
RLSVSALERSDDNGSHRVKRPGDYERSFTFDIA
HCCHHHHHCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA