| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ispZ
Identifier: 186475790
GI number: 186475790
Start: 1154309
End: 1154839
Strand: Reverse
Name: ispZ
Synonym: Bphy_1025
Alternate gene names: 186475790
Gene position: 1154839-1154309 (Counterclockwise)
Preceding gene: 186475791
Following gene: 186475789
Centisome position: 33.19
GC content: 57.25
Gene sequence:
>531_bases ATGAAATTCCTGTTCGATCTGTTCCCCATCATCCTGTTCTTCGTCGCGTACAAGGTGTGGGGCATCTTCACGGCAACGGC CGTTGCGATCGGCGCCACGCTCGTGCAGATCGCATGGGTCGCGTTCCGGCATCGCAAGGTCGACCCGATGCTGTGGGTGA GCCTCGGCGTCGTCACCGTGTTCGGCGGCGCGACACTCGTGCTGCACAACGATACCTTCATCAAATGGAAGCCGACCGTG CTGTACTGGGCGTTTTCCGTCGTGCTGGTGGTGTCCGCGCTGGGGTTCAACAAGAACCTGATCGAAGCGATGATGGGCAA GCAGATTCAGTTGCCGCATCGCATCTGGGGTCAGCTGAACTATGTGTGGGCGGTCTTTTTCGTGCTGCTCGGCATTCTCA ATCTGTTTGTCGCGTATAACTTTTCGACGGACGCGTGGGTCAATTTCAAGCTGTTCGGCGCGACGGGCTGCCTCGTCGTG TTTATCGTCGGGCAGAGTTTGTGGCTGTCGAAGTACATGAAGGAAGAGTGA
Upstream 100 bases:
>100_bases GATCCGTCCGGCCGTGCCCGCCAGGCACGCGACGCCTCGCGAAACGACTGCCGACAGCGCGCACGATGCGCCCAACACTC TCCGGATTGCCAACCCGACA
Downstream 100 bases:
>100_bases CATGAGCGACGACGTATTCCTTCACGCGAGCCCCGCGGAGCGCATCGCGCTGATCGAGGCGCGCATCACGGCGGCTCTCG CGCCCGTCGATTCGATCACC
Product: intracellular septation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKFLFDLFPIILFFVAYKVWGIFTATAVAIGATLVQIAWVAFRHRKVDPMLWVSLGVVTVFGGATLVLHNDTFIKWKPTV LYWAFSVVLVVSALGFNKNLIEAMMGKQIQLPHRIWGQLNYVWAVFFVLLGILNLFVAYNFSTDAWVNFKLFGATGCLVV FIVGQSLWLSKYMKEE
Sequences:
>Translated_176_residues MKFLFDLFPIILFFVAYKVWGIFTATAVAIGATLVQIAWVAFRHRKVDPMLWVSLGVVTVFGGATLVLHNDTFIKWKPTV LYWAFSVVLVVSALGFNKNLIEAMMGKQIQLPHRIWGQLNYVWAVFFVLLGILNLFVAYNFSTDAWVNFKLFGATGCLVV FIVGQSLWLSKYMKEE >Mature_176_residues MKFLFDLFPIILFFVAYKVWGIFTATAVAIGATLVQIAWVAFRHRKVDPMLWVSLGVVTVFGGATLVLHNDTFIKWKPTV LYWAFSVVLVVSALGFNKNLIEAMMGKQIQLPHRIWGQLNYVWAVFFVLLGILNLFVAYNFSTDAWVNFKLFGATGCLVV FIVGQSLWLSKYMKEE
Specific function: Involved in cell division; probably involved in intracellular septation
COG id: COG2917
COG function: function code D; Intracellular septation protein A
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispZ family
Homologues:
Organism=Escherichia coli, GI1787507, Length=176, Percent_Identity=41.4772727272727, Blast_Score=147, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ISPZ_BURP8 (B2JGM9)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857260.1 - GeneID: 6242523 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1025 - HOGENOM: HBG663014 - OMA: HDETFIK - ProtClustDB: PRK00259 - HAMAP: MF_00189 - InterPro: IPR006008 - TIGRFAMs: TIGR00997
Pfam domain/function: PF04279 IspA
EC number: NA
Molecular weight: Translated: 20052; Mature: 20052
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d3c8a84)-; HASH(0x1c9ca2b0)-; HASH(0x1c9cf4d0)-; HASH(0x1d5ebe2c)-; HASH(0x1ce9f6fc)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLFDLFPIILFFVAYKVWGIFTATAVAIGATLVQIAWVAFRHRKVDPMLWVSLGVVTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FGGATLVLHNDTFIKWKPTVLYWAFSVVLVVSALGFNKNLIEAMMGKQIQLPHRIWGQLN HCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH YVWAVFFVLLGILNLFVAYNFSTDAWVNFKLFGATGCLVVFIVGQSLWLSKYMKEE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MKFLFDLFPIILFFVAYKVWGIFTATAVAIGATLVQIAWVAFRHRKVDPMLWVSLGVVTV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FGGATLVLHNDTFIKWKPTVLYWAFSVVLVVSALGFNKNLIEAMMGKQIQLPHRIWGQLN HCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHH YVWAVFFVLLGILNLFVAYNFSTDAWVNFKLFGATGCLVVFIVGQSLWLSKYMKEE HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA