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The map label for this gene is ydiU [C]

Identifier: 186475791

GI number: 186475791

Start: 1155076

End: 1156593

Strand: Reverse

Name: ydiU [C]

Synonym: Bphy_1026

Alternate gene names: 186475791

Gene position: 1156593-1155076 (Counterclockwise)

Preceding gene: 186475796

Following gene: 186475790

Centisome position: 33.24

GC content: 65.15

Gene sequence:

>1518_bases
ATGTCGGCGGCGGCAGGCGCCATCGACAACCAGCGCGAAGGCAGTTTCGCGGCGCTCGGGAACGTCTTTCTGACACGCCT
GCCCGCGGCGCCGTTGCCAGCGCCTTACGTCGTCGGCTTTGCGCCGGATGTCGCGTCGATGCTCGGTTTCGATGCGTCGC
TCGCGAGCGCGCCGGGCTTCTCCGAGTTCTTCTCCGGCAACACGACGCGCGACTGGCCGTCGACGGCGCTGCCGTATGCA
TCGGTGTATTCGGGGCATCAGTTCGGCGTGTGGGCGGGCCAGCTCGGCGACGGGCGCGCGCTGACGCTCGGCGAGGCCGA
GCACAATGGCCGGCGCTTCGAGCTGCAACTCAAGGGCGGCGGACGCACGCCCTACTCGCGCATGGGCGACGGACGCGCGG
TGCTGCGCTCGTCGATCCGTGAATATCTATGCTCGGAAGCGATGCATCATCTTGGCATTCCGACCACCCGCGCGCTGTGC
GTGATCGGCTCCGATCAGCCCGTGCGCCGCGAAGAAATCGAAACGGCGGCCGTGGTCACACGGGTGTCGCCGAGCTTCGT
GCGCTTCGGGCACTTCGAGCATTTCTACGCGAACGACCGCGTCGATGCGTTGCGCTCGCTCGCCGATCATGTGATCGACC
GCTTTTATCCCGCGTGCCGCGACGCCGACGATCCATACCTTGCGCTGCTCAACGAAGCCGTGCTCTCGACAGCCGATCTG
ATCGTGCAATGGCAGGCCGTCGGCTTCTGCCACGGCGTGATGAACACCGACAACATGTCTATCCTCGGTCTCACGATCGA
CTATGGTCCGTTCGGCTTCATGGACGGCTTCGACGCGAACCACATCTGTAACCACTCGGATTCGCAGGGACGCTACGCGT
ACCGGATGCAGCCGCAGATCGCGTACTGGAACCTCTTCTGTCTCGCACAGGGGCTGCTGCCCCTGTTCGGCGAGCGGTAC
GGCGAGGCCGAACGCAGCGAACGCGCGGTGCAGGACGCGCAACGCGTGCTCGAAGGCTTCAAGGCGCGCTTTGCGCCCGC
GTTGGAAGCGCGCATGCGCGCGAAGCTCGGTCTGGACACGGAACGCGAAGGTGACGACCAGCTCGCCAACAAGCTGTTCG
AAATCATGCATGCGAACCGCGCCGACTTTACGCTGACGTTCCGCAATCTGTCGAAGCTGTCCCGTCACGACGCAAATGGC
GATGCGCCCGCGCGCGACCTGTTTCTCGACCGCGCCGCCTTCGACGCGTGGGCGACCGAATACCGCGCGCGGCTGTCGCA
TGAAACACGCGACGACGCTGAGCGTGCCGAAGCGATGAACCGCGTCAATCCGAAGTACGTGCTGCGCAATCACCTGGCTG
AAAATGCGATCCGCCGGGCGAAGGAAAAGGACTTCTCGGAGGTGGAACGCCTTGCTGCCGTGCTGCGCCACCCGTTCGAC
GAACAGCCCGAGCACGAGGCGTATGCGGGCTTGCCGCCCGATTGGGCATCGTCGCTCGAAGTGAGCTGCTCGTCGTGA

Upstream 100 bases:

>100_bases
GCGCGCCCTGCAGCGCGGCGGGGGCGGAATTACAATATCGGTTAATAAAGAGGCGCTCAATATGTCGTTTTCCCCATGCA
ATGCAGGGTTATCCGGTCCC

Downstream 100 bases:

>100_bases
GTCCGCGGCGTTTGGGGCTGCGCGCACGGGCGGGTTCGCGCGACTCCCCCAACCCGGCTGCGCTACAATTCGAGCCCAGA
TAGCATCGCGTGCGGGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MSAAAGAIDNQREGSFAALGNVFLTRLPAAPLPAPYVVGFAPDVASMLGFDASLASAPGFSEFFSGNTTRDWPSTALPYA
SVYSGHQFGVWAGQLGDGRALTLGEAEHNGRRFELQLKGGGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALC
VIGSDQPVRREEIETAAVVTRVSPSFVRFGHFEHFYANDRVDALRSLADHVIDRFYPACRDADDPYLALLNEAVLSTADL
IVQWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDANHICNHSDSQGRYAYRMQPQIAYWNLFCLAQGLLPLFGERY
GEAERSERAVQDAQRVLEGFKARFAPALEARMRAKLGLDTEREGDDQLANKLFEIMHANRADFTLTFRNLSKLSRHDANG
DAPARDLFLDRAAFDAWATEYRARLSHETRDDAERAEAMNRVNPKYVLRNHLAENAIRRAKEKDFSEVERLAAVLRHPFD
EQPEHEAYAGLPPDWASSLEVSCSS

Sequences:

>Translated_505_residues
MSAAAGAIDNQREGSFAALGNVFLTRLPAAPLPAPYVVGFAPDVASMLGFDASLASAPGFSEFFSGNTTRDWPSTALPYA
SVYSGHQFGVWAGQLGDGRALTLGEAEHNGRRFELQLKGGGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALC
VIGSDQPVRREEIETAAVVTRVSPSFVRFGHFEHFYANDRVDALRSLADHVIDRFYPACRDADDPYLALLNEAVLSTADL
IVQWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDANHICNHSDSQGRYAYRMQPQIAYWNLFCLAQGLLPLFGERY
GEAERSERAVQDAQRVLEGFKARFAPALEARMRAKLGLDTEREGDDQLANKLFEIMHANRADFTLTFRNLSKLSRHDANG
DAPARDLFLDRAAFDAWATEYRARLSHETRDDAERAEAMNRVNPKYVLRNHLAENAIRRAKEKDFSEVERLAAVLRHPFD
EQPEHEAYAGLPPDWASSLEVSCSS
>Mature_504_residues
SAAAGAIDNQREGSFAALGNVFLTRLPAAPLPAPYVVGFAPDVASMLGFDASLASAPGFSEFFSGNTTRDWPSTALPYAS
VYSGHQFGVWAGQLGDGRALTLGEAEHNGRRFELQLKGGGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCV
IGSDQPVRREEIETAAVVTRVSPSFVRFGHFEHFYANDRVDALRSLADHVIDRFYPACRDADDPYLALLNEAVLSTADLI
VQWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDANHICNHSDSQGRYAYRMQPQIAYWNLFCLAQGLLPLFGERYG
EAERSERAVQDAQRVLEGFKARFAPALEARMRAKLGLDTEREGDDQLANKLFEIMHANRADFTLTFRNLSKLSRHDANGD
APARDLFLDRAAFDAWATEYRARLSHETRDDAERAEAMNRVNPKYVLRNHLAENAIRRAKEKDFSEVERLAAVLRHPFDE
QPEHEAYAGLPPDWASSLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=397, Percent_Identity=45.8438287153652, Blast_Score=301, Evalue=1e-81,
Organism=Escherichia coli, GI1787999, Length=487, Percent_Identity=48.0492813141684, Blast_Score=429, Evalue=1e-121,
Organism=Saccharomyces cerevisiae, GI6325034, Length=402, Percent_Identity=33.0845771144279, Blast_Score=202, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 56097; Mature: 55966

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAAGAIDNQREGSFAALGNVFLTRLPAAPLPAPYVVGFAPDVASMLGFDASLASAPGF
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHCCCHHHHCCCCH
SEFFSGNTTRDWPSTALPYASVYSGHQFGVWAGQLGDGRALTLGEAEHNGRRFELQLKGG
HHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEECCC
GRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCVIGSDQPVRREEIETAAVVT
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
RVSPSFVRFGHFEHFYANDRVDALRSLADHVIDRFYPACRDADDPYLALLNEAVLSTADL
HCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IVQWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDANHICNHSDSQGRYAYRMQPQI
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
AYWNLFCLAQGLLPLFGERYGEAERSERAVQDAQRVLEGFKARFAPALEARMRAKLGLDT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EREGDDQLANKLFEIMHANRADFTLTFRNLSKLSRHDANGDAPARDLFLDRAAFDAWATE
CCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YRARLSHETRDDAERAEAMNRVNPKYVLRNHLAENAIRRAKEKDFSEVERLAAVLRHPFD
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQPEHEAYAGLPPDWASSLEVSCSS
CCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
SAAAGAIDNQREGSFAALGNVFLTRLPAAPLPAPYVVGFAPDVASMLGFDASLASAPGF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHCCCHHHHCCCCH
SEFFSGNTTRDWPSTALPYASVYSGHQFGVWAGQLGDGRALTLGEAEHNGRRFELQLKGG
HHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEECCC
GRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCVIGSDQPVRREEIETAAVVT
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
RVSPSFVRFGHFEHFYANDRVDALRSLADHVIDRFYPACRDADDPYLALLNEAVLSTADL
HCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
IVQWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDANHICNHSDSQGRYAYRMQPQI
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCH
AYWNLFCLAQGLLPLFGERYGEAERSERAVQDAQRVLEGFKARFAPALEARMRAKLGLDT
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EREGDDQLANKLFEIMHANRADFTLTFRNLSKLSRHDANGDAPARDLFLDRAAFDAWATE
CCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YRARLSHETRDDAERAEAMNRVNPKYVLRNHLAENAIRRAKEKDFSEVERLAAVLRHPFD
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
EQPEHEAYAGLPPDWASSLEVSCSS
CCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA