| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ylaK [H]
Identifier: 186475685
GI number: 186475685
Start: 1021327
End: 1023147
Strand: Reverse
Name: ylaK [H]
Synonym: Bphy_0920
Alternate gene names: 186475685
Gene position: 1023147-1021327 (Counterclockwise)
Preceding gene: 186475686
Following gene: 186475684
Centisome position: 29.41
GC content: 64.2
Gene sequence:
>1821_bases ATGCCTTTGCCTACCCCCCCCAGCAAGCTCGGCAATCTGTTGCCGCCTGATGAATACACGGCGAAGCCTGCAAAGCCTGG TCGAAAACAGGCACAAGAAGGGGAGCAAGCCGCATCGGCCGAATATGGCCGCGCCAATGTTGCCGCACCGATGACGCACG CCGCGAACGCGGCCACCACGCTGCGCCCCGTTCCGAACGCCGCCCCCGCTGTTGCAGAAGCCACGCCGTCGCGCAGCCGC AAGACGAAGCAGACGGCTGCCCTGCTGCAGCCGGTGCCCGCTGCGCCTGCCGCCGACGCGCAAGCGGCAGCCCCCATCGT CGCGCGCCGCGGCAAGGGTTCCGCCGAAGCGGAAGCGCCCGCCGCCGCAGCCGCCAAGACGGTGCGCCCGGCCACCAAGA AAGACTCGGCCAAGGGCGCGCAGGTCGAGATCCGCAAGCTGTTCGTACTCGACACCAACGTGCTGATGCACGATCCGACC TGCCTGTTCCGCTTCGAGGAACACGACGTCTATCTGCCCATGATGACGTTGGAAGAACTCGACAATCACAAGAAGGGGAT GTCGGAAGTCGCCCGCAACGCGCGCCAGGTGAGCCGCACGCTGGATACGCTCGTCGCGAACGCAGGCGAGATGTCGGAAG GCATTCCCCTTGCGCGTCTGGGCAGCCGCGAAGCGCTGGGGCGCCTGTACTTCCAGACGAAGCTCACACATATCGAGCCC GTCGAAGGCCTGCCGCAGGGCAAGGCCGACAACCAGATTCTCGGCGTCGTGCGCGCGCTGCAGCGTGACCGGCAGGATCG CCAGGTCGTGCTGGTGTCGAAAGACATCAACATGCGTATCAAGGCGCACGCGCTCGGCCTGCCCGCCGAAGACTACTTCA ACGACCAGGTTCTCGAAGACAAGGATCTGCTCTATTCCGGCATCCGTCAGCTGCCGCCCGACTTCTGGACGAAGCACGCG AAGGACATGGAGAGCTGGCAGGACACGAAAACGGGCACTACGTATTACCGCGTGACGGGCCCGCTGTGCGCGTCGATGCT GGTCAACGAGTTCGTCTATCTCGAGCCGCAGAACGGCGAGCCCGCGTTTCACGCCATCGTGCGCGAACTGAACGGCAAGA CGGCGCTACTGCAGACGCTGCGCGACTACGGCCACCACAAGAACAATGTGTGGGGCATCACGGCGCGCAATCGCGAGCAG AACTTCGCGCTGAACCTGCTGATGAACCCGGAGATCGACTTCGTCACGCTGCTCGGCCAGGCCGGCACGGGCAAGACACT CGTCGCGCTCGCGGCGGGCCTCGCGCAGGTGCTCGACGACAAGCGCTACAACGAAATCATCGTGACGCGCGCGACGGTTC CCGTCGGCGAAGACATCGGCTTCCTGCCCGGCACGGAAGAGGAAAAGATGCAGCCGTGGATGGGTGCATTCGACGACAAT CTCGAAGTGCTTCAGAAGACGGATGACGCGGCAGGCGAATGGGGCCGCGCGGCGACGCAGGAACTGATCCGCTCGCGCCT GAAGATCAAGAGCATGAACTTCATGCGCGGCCGCACGTTCGTCGACAAGTATCTGATCATCGACGAGGCGCAGAACCTGA CGCCGAAGCAGATGAAGACGCTCGTGACGCGCGCGGGCCCGGGCACCAAGATCATCTGTCTCGGCAACATCGCGCAGATC GATACGCCGTATCTGACGGAAGGCAGTTCAGGCCTCACGTATGTCGTCGATCGCTTCAAGGGCTGGGCGCACAGCGGTCA TGTGACGCTCGCGCGCGGCGAGCGCTCGCGTCTCGCGGATTACGCGTCGGATATTCTGTAA
Upstream 100 bases:
>100_bases AATCCGACACGCGCCACCGGACGCAAATTGCGAGCGCACGACGCACGACAGTTTGCGGCAGGCGGCGAAGAATTGTGACC CGCTTTATTTGAGGGAAACC
Downstream 100 bases:
>100_bases CGCCCTTCTTTGCGCTGTTCCAGGCCGCTTCCGGTGACGCCGGCAGCGGCTTTTTCATGCGCGCCGCGCACGCAAATTAT GCCCACCGCATCGTTCCACG
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSR KTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPT CLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHA KDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQ NFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQI DTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL
Sequences:
>Translated_606_residues MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSR KTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPT CLFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHA KDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQ NFALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQI DTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL >Mature_605_residues PLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATTLRPVPNAAPAVAEATPSRSRK TKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAPAAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTC LFRFEEHDVYLPMMTLEELDNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEPV EGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLEDKDLLYSGIRQLPPDFWTKHAK DMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGEPAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQN FALNLLMNPEIDFVTLLGQAGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDNL EVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKTLVTRAGPGTKIICLGNIAQID TPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLADYASDIL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
Organism=Escherichia coli, GI1787257, Length=191, Percent_Identity=37.17277486911, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI145693103, Length=260, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 66424; Mature: 66292
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATT CCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCE LRPVPNAAPAVAEATPSRSRKTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAP ECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC AAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTCLFRFEEHDVYLPMMTLEEL HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCEEEEEEECCCEEEHHHHHHHH DNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHCCCCCC VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLED CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCH KDLLYSGIRQLPPDFWTKHAKDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGE HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHEEEEECCCCC PAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQ HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC AGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCC LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHH LVTRAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLAD HHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH YASDIL HHHHCC >Mature Secondary Structure PLPTPPSKLGNLLPPDEYTAKPAKPGRKQAQEGEQAASAEYGRANVAAPMTHAANAATT CCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCE LRPVPNAAPAVAEATPSRSRKTKQTAALLQPVPAAPAADAQAAAPIVARRGKGSAEAEAP ECCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHCCCCCCCCCCCC AAAAAKTVRPATKKDSAKGAQVEIRKLFVLDTNVLMHDPTCLFRFEEHDVYLPMMTLEEL HHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCEEEECCEEEEEEECCCEEEHHHHHHHH DNHKKGMSEVARNARQVSRTLDTLVANAGEMSEGIPLARLGSREALGRLYFQTKLTHIEP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHCCCCCC VEGLPQGKADNQILGVVRALQRDRQDRQVVLVSKDINMRIKAHALGLPAEDYFNDQVLED CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHHCCCCCCCH KDLLYSGIRQLPPDFWTKHAKDMESWQDTKTGTTYYRVTGPLCASMLVNEFVYLEPQNGE HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHEEEEECCCCC PAFHAIVRELNGKTALLQTLRDYGHHKNNVWGITARNREQNFALNLLMNPEIDFVTLLGQ HHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECC AGTGKTLVALAAGLAQVLDDKRYNEIIVTRATVPVGEDIGFLPGTEEEKMQPWMGAFDDN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCCHHCCCCCC LEVLQKTDDAAGEWGRAATQELIRSRLKIKSMNFMRGRTFVDKYLIIDEAQNLTPKQMKT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHH LVTRAGPGTKIICLGNIAQIDTPYLTEGSSGLTYVVDRFKGWAHSGHVTLARGERSRLAD HHHCCCCCCEEEEECCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCHHHHHH YASDIL HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]