| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is bcp [H]
Identifier: 186475686
GI number: 186475686
Start: 1023513
End: 1023974
Strand: Reverse
Name: bcp [H]
Synonym: Bphy_0921
Alternate gene names: 186475686
Gene position: 1023974-1023513 (Counterclockwise)
Preceding gene: 186475687
Following gene: 186475685
Centisome position: 29.43
GC content: 59.09
Gene sequence:
>462_bases GTGCCCATCGCAGTCGATCAACCCGTTCCCGATTTCACCGCCCCCGCCACCGGCGGCGACTTCACGCTGTCCAGCCTGCG CGGCAAGAAGGTCGTCGTTTACTTCTATCCGAAAGACAACACACCCGGCTGTACGACGGAAGGCCTGCAGTTCCGCGACC TGTATCCGAAGTTCAAGAAGGCGGGTGCGGAGATCATCGGCGTGTCGCGCGACAGCGTGCGCTCACACGATAACTTCAAG GCCAAGCTCGAACTGCCGTTTACCTTGGTATCGGACCCCGACGAATCGTTGTGCACGCTGTTCGGTGTCATGAAACTGAA GAAAATGTATGGCAAGGAAGTACGGGGAATCGAGCGCTCCACGTTCGTAATCGATGCTGAAGGCGTGCTGCGCCGAGAAT GGCGGGGCGTGAAGGTGCCGGGCCACGTCGACGAGATTCTGGAGGCTGTACAAGCGCTTTGA
Upstream 100 bases:
>100_bases CCGTCCGCCGCTTCGCGCAGCAACCCCAAGCAACCCCGAAGAAAAAGTTCAGGCGCGCGGCCCACGCCGCCGCCGGCACC CATAACAACCGGAGGACCTC
Downstream 100 bases:
>100_bases GGCGCGTTATATTGGGCCGCAATGAGTGCCTGTTCACATACTTTTTTCCGCAGTTGCGCTGCAGATCGCGTAGTCGTCGT CGCTGACCACAAGGCAGTGA
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPIAVDQPVPDFTAPATGGDFTLSSLRGKKVVVYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIIGVSRDSVRSHDNFK AKLELPFTLVSDPDESLCTLFGVMKLKKMYGKEVRGIERSTFVIDAEGVLRREWRGVKVPGHVDEILEAVQAL
Sequences:
>Translated_153_residues MPIAVDQPVPDFTAPATGGDFTLSSLRGKKVVVYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIIGVSRDSVRSHDNFK AKLELPFTLVSDPDESLCTLFGVMKLKKMYGKEVRGIERSTFVIDAEGVLRREWRGVKVPGHVDEILEAVQAL >Mature_152_residues PIAVDQPVPDFTAPATGGDFTLSSLRGKKVVVYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEIIGVSRDSVRSHDNFKA KLELPFTLVSDPDESLCTLFGVMKLKKMYGKEVRGIERSTFVIDAEGVLRREWRGVKVPGHVDEILEAVQAL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=164, Percent_Identity=34.7560975609756, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI32455266, Length=164, Percent_Identity=34.7560975609756, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI32455264, Length=164, Percent_Identity=34.7560975609756, Blast_Score=72, Evalue=1e-13, Organism=Homo sapiens, GI32189392, Length=163, Percent_Identity=36.1963190184049, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=37.0860927152318, Blast_Score=107, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6322180, Length=106, Percent_Identity=37.7358490566038, Blast_Score=72, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357347, Length=166, Percent_Identity=31.9277108433735, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI17738015, Length=163, Percent_Identity=33.1288343558282, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16993; Mature: 16862
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAVDQPVPDFTAPATGGDFTLSSLRGKKVVVYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHCCHHHHH AGAEIIGVSRDSVRSHDNFKAKLELPFTLVSDPDESLCTLFGVMKLKKMYGKEVRGIERS CCCEEEECCHHHHCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TFVIDAEGVLRREWRGVKVPGHVDEILEAVQAL EEEEECCHHHHHHCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure PIAVDQPVPDFTAPATGGDFTLSSLRGKKVVVYFYPKDNTPGCTTEGLQFRDLYPKFKK CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHCCHHHHH AGAEIIGVSRDSVRSHDNFKAKLELPFTLVSDPDESLCTLFGVMKLKKMYGKEVRGIERS CCCEEEECCHHHHCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TFVIDAEGVLRREWRGVKVPGHVDEILEAVQAL EEEEECCHHHHHHCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]