| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475663
Identifier: 186475663
GI number: 186475663
Start: 1003216
End: 1003545
Strand: Reverse
Name: 186475663
Synonym: Bphy_0898
Alternate gene names: NA
Gene position: 1003545-1003216 (Counterclockwise)
Preceding gene: 186475664
Following gene: 186475662
Centisome position: 28.84
GC content: 63.94
Gene sequence:
>330_bases ATGAAATACGCCTTTGCGGCAGTTCGAGCGATGGCGGCGAGCCTCGCGATCGCTGGGATCGCGAGTCTTGCGGGCTGCGC CAGCTCAGGCTCGACCACGCTCACGTATCTGCCGAACGGCGACACCGGCTTCGCGATCAACTGCAGCGGCAGCGACGCAA GCCAGAACTGGGGCGAATGCTACAAGCGTGCAGGCGAGGCCTGCGGCGCATATGGCTATGACGTGATCTCGAAGGATGTC GACACGGGCGGCACATCGGGTGGCTCGCTGGGCGGCGTGCTCGGCGCCAACGTGAAGAATCGCTCGATGGTGATCCGCTG CAAGCAATAG
Upstream 100 bases:
>100_bases GGGCCGTACACGGCTCCATCACAGAGACGGGCGGGCACGCGCCGTGCCGCGTTTACCGGCACCGCGTCCCGACACGCAAC GACACAGAGAGGACACTCCG
Downstream 100 bases:
>100_bases TCGCCTCGCTTCGCGTGATGTCGTCCGATGTTTGATATGAGCGGACAAAAAAAGCCCGGCACGAGGCCGGGCAAACGGGG GTTCGGCGCATATCGGCAAA
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKYAFAAVRAMAASLAIAGIASLAGCASSGSTTLTYLPNGDTGFAINCSGSDASQNWGECYKRAGEACGAYGYDVISKDV DTGGTSGGSLGGVLGANVKNRSMVIRCKQ
Sequences:
>Translated_109_residues MKYAFAAVRAMAASLAIAGIASLAGCASSGSTTLTYLPNGDTGFAINCSGSDASQNWGECYKRAGEACGAYGYDVISKDV DTGGTSGGSLGGVLGANVKNRSMVIRCKQ >Mature_109_residues MKYAFAAVRAMAASLAIAGIASLAGCASSGSTTLTYLPNGDTGFAINCSGSDASQNWGECYKRAGEACGAYGYDVISKDV DTGGTSGGSLGGVLGANVKNRSMVIRCKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10916; Mature: 10916
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYAFAAVRAMAASLAIAGIASLAGCASSGSTTLTYLPNGDTGFAINCSGSDASQNWGEC CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH YKRAGEACGAYGYDVISKDVDTGGTSGGSLGGVLGANVKNRSMVIRCKQ HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEECC >Mature Secondary Structure MKYAFAAVRAMAASLAIAGIASLAGCASSGSTTLTYLPNGDTGFAINCSGSDASQNWGEC CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCHHHHH YKRAGEACGAYGYDVISKDVDTGGTSGGSLGGVLGANVKNRSMVIRCKQ HHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA