| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475637
Identifier: 186475637
GI number: 186475637
Start: 972757
End: 974001
Strand: Direct
Name: 186475637
Synonym: Bphy_0872
Alternate gene names: NA
Gene position: 972757-974001 (Clockwise)
Preceding gene: 186475636
Following gene: 186475638
Centisome position: 27.96
GC content: 65.38
Gene sequence:
>1245_bases ATGTGTTCGACGCCCCTTCGTGTCTTCCTGCTGTTCTCCGCCGGCTACTTCGTTTCGTATGTTTTTCGTGGCGTCAACCT CGGCTTTGCACCGCTGATCACCCATGAGCTGCGCTTGTCGGCCACCGATCTCGGTCTGTTAACCAGTCTCTATTTTCTTG GCTTCGCGGGCGCGCAACTGCCGGCCGGCGTACTGCTGGATCACTACGGTTCGCGTCGCGTGACGGCAGGCATGCTGTTG TTCGCGGCCGCCGGCATCGGTGTGTTCGGCGCGGCACACGGCGTGGGTGCGATGATGGCGGGGCGGCTTCTGATTGGTGT CGGCGTGTCCGTGTGTCTCGGCGGCGCGTTCAAGGCCCTCGCGCAGCATTTCCCGACGGCGCGGCTGCCGCTGATCAACG GGCTCGTGATGGCCGTCGGCGGTCTGGGCGGCGTCGCGGTCGGTTCGCCGCTGACGTGGGTGCTGACGTTCGCGAGCTGG CGCGCCGTCTGTTTCGCGCTCGTCGTCCTCACGATCGCGGTTGCGGCAATGCTGTGGGCATTCGCACCCGAAAAGCAGGA GACGCGCCATCAGGCGAGCCTCGTCAGCCAGTTCAAGGGCACCTGGCACATTCTGCGCAGCGCGGCCTTCTGGAAGATCG CGTCGTTCTCGGTGGTCACGCAGGGCGTCTTTTACGCGATGCAATCGCTGTGGGTGGGCGCCTGGCTGCGCGACGTGTCG GGCTTCGGCACGCACAAAGCGGCCGCGTTGGTGTCTGTGCTGGGCTTCGCGATGATGGCCGGCTGCGTGGGCTTCGGCGC TGCGGCCCGCGGCATGGAGCGGCGCGGCCTGTCGCTGTATGCGTTTTGCGGTGTCGGCATGGCGCTGTTCGTGATCACGC AGTTGCTGATCATGCTGCAGGCGCCGCTACCGGCGGGGCTGCTGTGGGCGGCGTACGGGGTTTTTGGGGGCGTCGGCATC CTGAGTTATGCGGTGCTCGCGCGCCATTTCCCGCCGCATCTGATCGGCCGCGCCAACACCACGCTGACCCTGATCATTTT CCTGTTGATCTTTGGTTTTCAGATCGGCGTCGGCGCCGTGTTGTCGCGCTGGACGCCTGTCGACGGTCACTATCCGCGCG CTGCGCATCTGATGGCGTGGGGTGTTCTCGTCGGGCTGCAACTGGCGAGCGCTGTCTGGTACATGCTGCCGAGCCGGGTG CTTGCCAAAGACCCCGCACACATTCACGCCGAGCATCAGCCGTAA
Upstream 100 bases:
>100_bases CTGGTGTTTTCCGTACGGCAAGCGCGGTCTTGCACCACGACGGACACGATTCCGCTATCGTTCACCCTCGGGCCCGCTGG GGCCATCCTGATGACGCATC
Downstream 100 bases:
>100_bases CTCGACCGGCGTAATCCTGATAAAGCGAAAGAGGGTGGCGAAGCGCGCGCTTGCAGCAGGCCCATTGCGCCCGAGCGTGC CGTCGAATCCAGTTCGCCCG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Transporter MFS Superfamily; Sugar Phosphate Permease; Carbohydrate Transport Membrane Protein; MFS Family Transporter; Facilitator Family Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MCSTPLRVFLLFSAGYFVSYVFRGVNLGFAPLITHELRLSATDLGLLTSLYFLGFAGAQLPAGVLLDHYGSRRVTAGMLL FAAAGIGVFGAAHGVGAMMAGRLLIGVGVSVCLGGAFKALAQHFPTARLPLINGLVMAVGGLGGVAVGSPLTWVLTFASW RAVCFALVVLTIAVAAMLWAFAPEKQETRHQASLVSQFKGTWHILRSAAFWKIASFSVVTQGVFYAMQSLWVGAWLRDVS GFGTHKAAALVSVLGFAMMAGCVGFGAAARGMERRGLSLYAFCGVGMALFVITQLLIMLQAPLPAGLLWAAYGVFGGVGI LSYAVLARHFPPHLIGRANTTLTLIIFLLIFGFQIGVGAVLSRWTPVDGHYPRAAHLMAWGVLVGLQLASAVWYMLPSRV LAKDPAHIHAEHQP
Sequences:
>Translated_414_residues MCSTPLRVFLLFSAGYFVSYVFRGVNLGFAPLITHELRLSATDLGLLTSLYFLGFAGAQLPAGVLLDHYGSRRVTAGMLL FAAAGIGVFGAAHGVGAMMAGRLLIGVGVSVCLGGAFKALAQHFPTARLPLINGLVMAVGGLGGVAVGSPLTWVLTFASW RAVCFALVVLTIAVAAMLWAFAPEKQETRHQASLVSQFKGTWHILRSAAFWKIASFSVVTQGVFYAMQSLWVGAWLRDVS GFGTHKAAALVSVLGFAMMAGCVGFGAAARGMERRGLSLYAFCGVGMALFVITQLLIMLQAPLPAGLLWAAYGVFGGVGI LSYAVLARHFPPHLIGRANTTLTLIIFLLIFGFQIGVGAVLSRWTPVDGHYPRAAHLMAWGVLVGLQLASAVWYMLPSRV LAKDPAHIHAEHQP >Mature_414_residues MCSTPLRVFLLFSAGYFVSYVFRGVNLGFAPLITHELRLSATDLGLLTSLYFLGFAGAQLPAGVLLDHYGSRRVTAGMLL FAAAGIGVFGAAHGVGAMMAGRLLIGVGVSVCLGGAFKALAQHFPTARLPLINGLVMAVGGLGGVAVGSPLTWVLTFASW RAVCFALVVLTIAVAAMLWAFAPEKQETRHQASLVSQFKGTWHILRSAAFWKIASFSVVTQGVFYAMQSLWVGAWLRDVS GFGTHKAAALVSVLGFAMMAGCVGFGAAARGMERRGLSLYAFCGVGMALFVITQLLIMLQAPLPAGLLWAAYGVFGGVGI LSYAVLARHFPPHLIGRANTTLTLIIFLLIFGFQIGVGAVLSRWTPVDGHYPRAAHLMAWGVLVGLQLASAVWYMLPSRV LAKDPAHIHAEHQP
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43888; Mature: 43888
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSTPLRVFLLFSAGYFVSYVFRGVNLGFAPLITHELRLSATDLGLLTSLYFLGFAGAQL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC PAGVLLDHYGSRRVTAGMLLFAAAGIGVFGAAHGVGAMMAGRLLIGVGVSVCLGGAFKAL CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHFPTARLPLINGLVMAVGGLGGVAVGSPLTWVLTFASWRAVCFALVVLTIAVAAMLWA HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAPEKQETRHQASLVSQFKGTWHILRSAAFWKIASFSVVTQGVFYAMQSLWVGAWLRDVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFGTHKAAALVSVLGFAMMAGCVGFGAAARGMERRGLSLYAFCGVGMALFVITQLLIMLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEHHHHHHHHHHHHHHHHHHHH APLPAGLLWAAYGVFGGVGILSYAVLARHFPPHLIGRANTTLTLIIFLLIFGFQIGVGAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSRWTPVDGHYPRAAHLMAWGVLVGLQLASAVWYMLPSRVLAKDPAHIHAEHQP HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MCSTPLRVFLLFSAGYFVSYVFRGVNLGFAPLITHELRLSATDLGLLTSLYFLGFAGAQL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCC PAGVLLDHYGSRRVTAGMLLFAAAGIGVFGAAHGVGAMMAGRLLIGVGVSVCLGGAFKAL CHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQHFPTARLPLINGLVMAVGGLGGVAVGSPLTWVLTFASWRAVCFALVVLTIAVAAMLWA HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAPEKQETRHQASLVSQFKGTWHILRSAAFWKIASFSVVTQGVFYAMQSLWVGAWLRDVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFGTHKAAALVSVLGFAMMAGCVGFGAAARGMERRGLSLYAFCGVGMALFVITQLLIMLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEHHHHHHHHHHHHHHHHHHHH APLPAGLLWAAYGVFGGVGILSYAVLARHFPPHLIGRANTTLTLIIFLLIFGFQIGVGAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH LSRWTPVDGHYPRAAHLMAWGVLVGLQLASAVWYMLPSRVLAKDPAHIHAEHQP HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA