| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is gloB [H]
Identifier: 186475635
GI number: 186475635
Start: 969864
End: 970667
Strand: Direct
Name: gloB [H]
Synonym: Bphy_0870
Alternate gene names: 186475635
Gene position: 969864-970667 (Clockwise)
Preceding gene: 186475628
Following gene: 186475636
Centisome position: 27.88
GC content: 64.68
Gene sequence:
>804_bases ATGAATTCGCTCGAGTACGTGCCCGTCCCGGCGTTTGATGACAATTACATCTGGGTCGTGTCGGATGGACATCATGCCGT CGTCGTCGATCCGGGCGACGCCGCCCCGGTGAAGGCCTATCTGGCGAAACGGGGATGGCGGCTGAGCGCTATTTTACTCA CCCACCATCATGCCGACCACGTCGGCGGAGTAGCCGATCTGCTGAACGGCCAGGATGCGAGCCAGGCTTTGCCCGTCTAC GGGCCGGCGGGAGAAGCGATTCCGTGGCTGACGGAACGCCTCGTGCAGGGCGACACCGTGCATATCGCCGCGCCTTCTCT CACTTTCACGATTCTCGACGTGCCCGGTCATACGCGCGGGCACATAGCGTATTTCCAGGCGGCCGACTCGCGCGGCACGC CGCACGTGTTTTGCGGCGACACACTGTTCGCTTGCGGCTGCGGCCGGCTGTTCGAAGGGACGCCAGCGCAGATGCTCGAG TCGCTGGATGCGCTCGCCGCACTGCCCGGCGAAACGGAGGTGCACTGCGCGCACGAATACACGCTATCGAATATCCGCTT CGCGCTCGCCTGCGAGCCTGACAACCCCGTCCTGCGAGCCTGGCGCGACGAAGCGGCGGCACTGCGCGCCCGTCACATGC CGACGCTGCCCACGACGATCGCACACGAGCGTGCAGTGAACCCGTTCTTGCGGGCGGGCGAGGCCTCCGTGCAATCGACG CTCGCCGAGCAGCTACATGAATCAGTGCCGGACCGGTTGGCCGCTTTCACATTGATGCGCGAGTGGAAGAACAGGTTCCG CTAA
Upstream 100 bases:
>100_bases CGCCTGCTCCCACTCCAGCACATAGCGTCCGGGCGGGGAGGTGGTCCAGGCGGGCCAGTCTATAATCGATCGGTCAGACA TGTTAAAGAATGCGTCGCCT
Downstream 100 bases:
>100_bases CCGCTCCATTCATGGGGGCATGCTCAGCCAAATCGTAGAAATGATCGCCAAGCCTCAGATTTGGCAGACTTTTTCACATC TTTCTGATTGACGGGAACGG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNSLEYVPVPAFDDNYIWVVSDGHHAVVVDPGDAAPVKAYLAKRGWRLSAILLTHHHADHVGGVADLLNGQDASQALPVY GPAGEAIPWLTERLVQGDTVHIAAPSLTFTILDVPGHTRGHIAYFQAADSRGTPHVFCGDTLFACGCGRLFEGTPAQMLE SLDALAALPGETEVHCAHEYTLSNIRFALACEPDNPVLRAWRDEAAALRARHMPTLPTTIAHERAVNPFLRAGEASVQST LAEQLHESVPDRLAAFTLMREWKNRFR
Sequences:
>Translated_267_residues MNSLEYVPVPAFDDNYIWVVSDGHHAVVVDPGDAAPVKAYLAKRGWRLSAILLTHHHADHVGGVADLLNGQDASQALPVY GPAGEAIPWLTERLVQGDTVHIAAPSLTFTILDVPGHTRGHIAYFQAADSRGTPHVFCGDTLFACGCGRLFEGTPAQMLE SLDALAALPGETEVHCAHEYTLSNIRFALACEPDNPVLRAWRDEAAALRARHMPTLPTTIAHERAVNPFLRAGEASVQST LAEQLHESVPDRLAAFTLMREWKNRFR >Mature_267_residues MNSLEYVPVPAFDDNYIWVVSDGHHAVVVDPGDAAPVKAYLAKRGWRLSAILLTHHHADHVGGVADLLNGQDASQALPVY GPAGEAIPWLTERLVQGDTVHIAAPSLTFTILDVPGHTRGHIAYFQAADSRGTPHVFCGDTLFACGCGRLFEGTPAQMLE SLDALAALPGETEVHCAHEYTLSNIRFALACEPDNPVLRAWRDEAAALRARHMPTLPTTIAHERAVNPFLRAGEASVQST LAEQLHESVPDRLAAFTLMREWKNRFR
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=266, Percent_Identity=36.8421052631579, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI94538322, Length=266, Percent_Identity=36.8421052631579, Blast_Score=158, Evalue=4e-39, Organism=Homo sapiens, GI116642887, Length=245, Percent_Identity=37.1428571428571, Blast_Score=148, Evalue=4e-36, Organism=Homo sapiens, GI21703352, Length=245, Percent_Identity=37.1428571428571, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI14150041, Length=234, Percent_Identity=38.8888888888889, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI46361987, Length=195, Percent_Identity=39.4871794871795, Blast_Score=117, Evalue=1e-26, Organism=Escherichia coli, GI1786406, Length=259, Percent_Identity=42.8571428571429, Blast_Score=198, Evalue=3e-52, Organism=Escherichia coli, GI1787158, Length=166, Percent_Identity=34.9397590361446, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17536925, Length=263, Percent_Identity=35.7414448669202, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6320478, Length=273, Percent_Identity=30.03663003663, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6324614, Length=237, Percent_Identity=28.6919831223629, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI21356335, Length=271, Percent_Identity=39.4833948339483, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24667711, Length=271, Percent_Identity=39.4833948339483, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI24667703, Length=243, Percent_Identity=42.3868312757202, Blast_Score=172, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 29119; Mature: 29119
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLEYVPVPAFDDNYIWVVSDGHHAVVVDPGDAAPVKAYLAKRGWRLSAILLTHHHADH CCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCHH VGGVADLLNGQDASQALPVYGPAGEAIPWLTERLVQGDTVHIAAPSLTFTILDVPGHTRG HCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCC HIAYFQAADSRGTPHVFCGDTLFACGCGRLFEGTPAQMLESLDALAALPGETEVHCAHEY CEEEEEECCCCCCCEEEECCHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE TLSNIRFALACEPDNPVLRAWRDEAAALRARHMPTLPTTIAHERAVNPFLRAGEASVQST ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCCHHHHHHH LAEQLHESVPDRLAAFTLMREWKNRFR HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSLEYVPVPAFDDNYIWVVSDGHHAVVVDPGDAAPVKAYLAKRGWRLSAILLTHHHADH CCCCCEEECCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCHH VGGVADLLNGQDASQALPVYGPAGEAIPWLTERLVQGDTVHIAAPSLTFTILDVPGHTRG HCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCC HIAYFQAADSRGTPHVFCGDTLFACGCGRLFEGTPAQMLESLDALAALPGETEVHCAHEY CEEEEEECCCCCCCEEEECCHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE TLSNIRFALACEPDNPVLRAWRDEAAALRARHMPTLPTTIAHERAVNPFLRAGEASVQST ECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHCCHHHHHHH LAEQLHESVPDRLAAFTLMREWKNRFR HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA