| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475631
Identifier: 186475631
GI number: 186475631
Start: 966391
End: 967374
Strand: Reverse
Name: 186475631
Synonym: Bphy_0866
Alternate gene names: NA
Gene position: 967374-966391 (Counterclockwise)
Preceding gene: 186475632
Following gene: 186475630
Centisome position: 27.8
GC content: 64.94
Gene sequence:
>984_bases ATGCCGCTCTCCGATTCGCTTCGTCTAGCCGTCCTCGTTCCCTGCTACAACGAGGCAGCAACCGTCCGCGCCGTCGTGCG GGATTTTCGCGACGCGCTACCGGGCGCGGAGATCTACGTATTCGACAACAACTCCACGGATGACACGAGCGATATCGCGC GGAAAGCAGGCGCCGTGGTCCGCCAGGTCGTGTACCAGGGCAAGGGCAACGTGATCCGTCGGATGTTCGCGGATATCGAC GCCGACGTGTATGTGCTCGTCGACGGCGACGACACCTACGACGCCGCGGCCGCGCCGCAAATGATCGAACGGTTGGTCGA GGACGCGCTCGACATGGTCGTCGCGACCCGTCACTCGGAGGAGCAGGAAGCCTATCGTCTGGGCCACCGCTTCGGCAACG TGATGCTGACGCGCTTCGTCGCGTCGATCTTCGGCCGCACGTTCACCGACATGCTGTCGGGTTATCGCGTGTTCTCCCGC CGCTATGTGAAGTCGTTCCCCGCGCACGCGAAAGGCTTCGAGACGGAAACGGAGCTCACGGTCCACGCACTCGAACTGCG CATGCCCGTCGCCGAAGTCGCGACGCGCTACAAGTCGCGCCCCGAAGGCTCCGTCAGCAAGCTGAACACCTATCGCGACG GCTTCCGCATTCTCGGCATGATCGTGAAGCTGTTCCGCGCCGAGCGGCCGCTGGCGTTCTTCTCGATCGGCACGGTGCTG TGCGCACTCGCGTCGATCGTGCTCGCTGTACCGCTCTTCGAGACGTACTTCGAAACAGGACTCGTGCCGCGCTTTCCGAC TGCCGTGCTGTGCGCCGGGCTCATGATCTTCGCGGCGCTCTTTCTCGTGTGCGGGGTGATCCTCGACACCGTCACGCATG GCCGCGCGGAAGTGAAGCGTCTCGCGTACCTCGCCGTTCCGGCGCCCGGCACGCAACGCGCGGCTGCAATGGCCACGTCC GCCGCGGGACGGCTCGTCGAATGA
Upstream 100 bases:
>100_bases ACGATGAAAGCCTGCCAGATACGTGCGATAAAATACCCGCGCTTCGCGTACCCGCCCGCCGCGCGAAGCACGTCATTCAT CAACTCCATCAACTGCGCCG
Downstream 100 bases:
>100_bases AGCGCGAACTGCTGCGCTTCGCAATTGCCGGCGTAGTCGGCCTCCTCGTCGATGCCGGCGTGCTGTACGGCATGCTCGCG CTCGGCGCGGGCTATTTCGT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: ORF10X9 [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MPLSDSLRLAVLVPCYNEAATVRAVVRDFRDALPGAEIYVFDNNSTDDTSDIARKAGAVVRQVVYQGKGNVIRRMFADID ADVYVLVDGDDTYDAAAAPQMIERLVEDALDMVVATRHSEEQEAYRLGHRFGNVMLTRFVASIFGRTFTDMLSGYRVFSR RYVKSFPAHAKGFETETELTVHALELRMPVAEVATRYKSRPEGSVSKLNTYRDGFRILGMIVKLFRAERPLAFFSIGTVL CALASIVLAVPLFETYFETGLVPRFPTAVLCAGLMIFAALFLVCGVILDTVTHGRAEVKRLAYLAVPAPGTQRAAAMATS AAGRLVE
Sequences:
>Translated_327_residues MPLSDSLRLAVLVPCYNEAATVRAVVRDFRDALPGAEIYVFDNNSTDDTSDIARKAGAVVRQVVYQGKGNVIRRMFADID ADVYVLVDGDDTYDAAAAPQMIERLVEDALDMVVATRHSEEQEAYRLGHRFGNVMLTRFVASIFGRTFTDMLSGYRVFSR RYVKSFPAHAKGFETETELTVHALELRMPVAEVATRYKSRPEGSVSKLNTYRDGFRILGMIVKLFRAERPLAFFSIGTVL CALASIVLAVPLFETYFETGLVPRFPTAVLCAGLMIFAALFLVCGVILDTVTHGRAEVKRLAYLAVPAPGTQRAAAMATS AAGRLVE >Mature_326_residues PLSDSLRLAVLVPCYNEAATVRAVVRDFRDALPGAEIYVFDNNSTDDTSDIARKAGAVVRQVVYQGKGNVIRRMFADIDA DVYVLVDGDDTYDAAAAPQMIERLVEDALDMVVATRHSEEQEAYRLGHRFGNVMLTRFVASIFGRTFTDMLSGYRVFSRR YVKSFPAHAKGFETETELTVHALELRMPVAEVATRYKSRPEGSVSKLNTYRDGFRILGMIVKLFRAERPLAFFSIGTVLC ALASIVLAVPLFETYFETGLVPRFPTAVLCAGLMIFAALFLVCGVILDTVTHGRAEVKRLAYLAVPAPGTQRAAAMATSA AGRLVE
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35997; Mature: 35866
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSDSLRLAVLVPCYNEAATVRAVVRDFRDALPGAEIYVFDNNSTDDTSDIARKAGAVV CCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RQVVYQGKGNVIRRMFADIDADVYVLVDGDDTYDAAAAPQMIERLVEDALDMVVATRHSE HHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EQEAYRLGHRFGNVMLTRFVASIFGRTFTDMLSGYRVFSRRYVKSFPAHAKGFETETELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH VHALELRMPVAEVATRYKSRPEGSVSKLNTYRDGFRILGMIVKLFRAERPLAFFSIGTVL HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CALASIVLAVPLFETYFETGLVPRFPTAVLCAGLMIFAALFLVCGVILDTVTHGRAEVKR HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAYLAVPAPGTQRAAAMATSAAGRLVE HHHEEECCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure PLSDSLRLAVLVPCYNEAATVRAVVRDFRDALPGAEIYVFDNNSTDDTSDIARKAGAVV CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH RQVVYQGKGNVIRRMFADIDADVYVLVDGDDTYDAAAAPQMIERLVEDALDMVVATRHSE HHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCH EQEAYRLGHRFGNVMLTRFVASIFGRTFTDMLSGYRVFSRRYVKSFPAHAKGFETETELT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH VHALELRMPVAEVATRYKSRPEGSVSKLNTYRDGFRILGMIVKLFRAERPLAFFSIGTVL HHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH CALASIVLAVPLFETYFETGLVPRFPTAVLCAGLMIFAALFLVCGVILDTVTHGRAEVKR HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LAYLAVPAPGTQRAAAMATSAAGRLVE HHHEEECCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7507920; 12384590; 12704152 [H]