| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pgsA [H]
Identifier: 186475617
GI number: 186475617
Start: 952283
End: 952873
Strand: Direct
Name: pgsA [H]
Synonym: Bphy_0852
Alternate gene names: 186475617
Gene position: 952283-952873 (Clockwise)
Preceding gene: 186475616
Following gene: 186475619
Centisome position: 27.37
GC content: 59.9
Gene sequence:
>591_bases ATGCCGTTTAATTTTCCGATCTTCCTGACGTGGCTGCGGATAGTATTGATTCCGCTCGTGGTGGGCGTGTTCTATCTGCC GGACATGATGCTGAGTCCGATGCACCGTAATCTGGCGGCAGCGACGATCTTCATCCTCGCTGCGCTGACCGACTGGTTCG ACGGCTTTCTCGCGCGTAAATGGAACCAGACGTCGGCTTTCGGCGCGTTCCTCGACCCCGTCGCCGACAAGCTGATGGTG ACGGCCGCGCTGCTGGTGCTCGTGCAACTGTCCCGGCTGGACTCGGCGATCGCGCTGGTGATCGTCGGTCGCGAGATCGC GATTTCCGCGCTGCGCGAATGGATGGCGCAAATAGGCGCATCGAAGAGCGTTGCCGTGAATTCGCTCGGCAAGTTCAAAA CGGCCTGCCAGATGACGGCCATTCCGATGCTGCTGTTTTATGGGCCGCTGTCGTTCGGCGCGTTTTCGATTGACACGCGC GTATGGGGTTTGTGGCTCATCTATCTCGCTGCGTTCCTGACGATCTGGTCGATGCTGTACTACATGAAGCTCGCCTGGCC GCAGATCCGCGAGCGCGGCGGCATGGCGTAA
Upstream 100 bases:
>100_bases GCCCCACAGCCGCGATGCGCGCGCGCCGGGGCGTTGCTTGTGGCGCGCCGGGTGAACCGGCACAATTGCATCTCTTATCT CAGAACGTAGCGCCAGCCCC
Downstream 100 bases:
>100_bases TCGAAGCGCGGCGAGGGGCCTCACTAAAATTTTCAATCGCTCGTACAAAAAGAGTTGACACGATTCCGTGCCTTCTACAT AATCTCGTTTCTCCGGTGCA
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MPFNFPIFLTWLRIVLIPLVVGVFYLPDMMLSPMHRNLAAATIFILAALTDWFDGFLARKWNQTSAFGAFLDPVADKLMV TAALLVLVQLSRLDSAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMTAIPMLLFYGPLSFGAFSIDTR VWGLWLIYLAAFLTIWSMLYYMKLAWPQIRERGGMA
Sequences:
>Translated_196_residues MPFNFPIFLTWLRIVLIPLVVGVFYLPDMMLSPMHRNLAAATIFILAALTDWFDGFLARKWNQTSAFGAFLDPVADKLMV TAALLVLVQLSRLDSAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMTAIPMLLFYGPLSFGAFSIDTR VWGLWLIYLAAFLTIWSMLYYMKLAWPQIRERGGMA >Mature_195_residues PFNFPIFLTWLRIVLIPLVVGVFYLPDMMLSPMHRNLAAATIFILAALTDWFDGFLARKWNQTSAFGAFLDPVADKLMVT AALLVLVQLSRLDSAIALVIVGREIAISALREWMAQIGASKSVAVNSLGKFKTACQMTAIPMLLFYGPLSFGAFSIDTRV WGLWLIYLAAFLTIWSMLYYMKLAWPQIRERGGMA
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=187, Percent_Identity=49.1978609625668, Blast_Score=152, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21947; Mature: 21815
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFNFPIFLTWLRIVLIPLVVGVFYLPDMMLSPMHRNLAAATIFILAALTDWFDGFLARK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSAFGAFLDPVADKLMVTAALLVLVQLSRLDSAIALVIVGREIAISALREWMAQIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNSLGKFKTACQMTAIPMLLFYGPLSFGAFSIDTRVWGLWLIYLAAFLTIWSMLY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YMKLAWPQIRERGGMA HHHHHHHHHHHCCCCC >Mature Secondary Structure PFNFPIFLTWLRIVLIPLVVGVFYLPDMMLSPMHRNLAAATIFILAALTDWFDGFLARK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WNQTSAFGAFLDPVADKLMVTAALLVLVQLSRLDSAIALVIVGREIAISALREWMAQIGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKSVAVNSLGKFKTACQMTAIPMLLFYGPLSFGAFSIDTRVWGLWLIYLAAFLTIWSMLY CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YMKLAWPQIRERGGMA HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 14528314 [H]