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The map label for this gene is recO [H]

Identifier: 186475608

GI number: 186475608

Start: 942349

End: 943359

Strand: Direct

Name: recO [H]

Synonym: Bphy_0843

Alternate gene names: 186475608

Gene position: 942349-943359 (Clockwise)

Preceding gene: 186475607

Following gene: 186475609

Centisome position: 27.09

GC content: 64.39

Gene sequence:

>1011_bases
ATGGTTACGAATGAGATTACGCATGATGACGCCTCGGGTACCCGCGCCGACGCGTGGATGACGCTGCCGGCCGAAGCCGA
TCCTGACGTCGACTCCGACGACGCCACGGGCGCGCGGGACGAACCGTTCGCGCCGCCGGCGCCAGCCAAACCGGCGCGTC
CCGCGCGTTCCGTGAAGCGCGGCACGTCGCGCAAAAGCGGCGACGATTTTTCGGAGGATGGCGGCCATGCCGTAGCAACG
CCGCGTAAAACATCGGCGCGCCGTTCGCCGTCTCGCGTGCCGCGCGCCGCTGCCTCCGAATTCCGCATCGGCGAACAGCC
CGCCTTCGTCCTGCACAGCTATCCATACCGTGAAACGAGTCTGATCATCGACGTGCTGTCGCGCGATCACGGCCGCATCG
CGCTTGTCGCGAAGGGCGCCAAGCGCCCGCATTCCGCACTGCGCGGCGTGTTGCAAACGTTCCAGCCGCTGTCGCTCAAC
TGGTCCGGCAAATCGGAAATGCGCACGCTGACGGGCGCCGAGTGGGTCGGCGGAATGCTGCCCCTGACGGGCGACGCGCT
GCTGTGCGGCTTCTACGTGAACGAGCTACTCGTGAAGTTTCTCGCACGTGAAGATCCGCATCCACAACTGTTCCATCATT
ATGTCGTGACCCTGACGCGCCTTGCGCACGACGAACCGCCCGTGCAGGTGCTGCGTTCGTTTGAGCGCGTGCTGCTGCGC
GAGACGGGTTACGCGATGTCGCTCAATCGTACAGTGGCGCGCAAGGCCGTGGTGCCCGATGGCCGCTACGTGTTCGATCC
CGAGCGCGGCGTGCGCGAAGCGTCCGACGAGTATCCGTCGAACTGGCCCGTCATCAGCGGACAAACCTTGCTCGATATGG
AGCAGGACGATTACCATCGAGCGCAGACCATCGCGCAAAGCAAGACGCTGATGCGCTTTTTGCTCAACATCTATCTGGGC
GGCACGCCGCTCGCGACGCGCCAGATCCTGATCGACCTGCAGAACTTATGA

Upstream 100 bases:

>100_bases
CGCCTTGACATGGAAAAGCTGTTCGACGGCCCGGTGTATCTCGAGACGTTCATCAAGGTGAAGAGTGGCTGGGCGGACAA
TGAAGCCGGACTCCGTGCCT

Downstream 100 bases:

>100_bases
GCTTCTTCCTGACTTCTCCGAATGTGATCGACCTCGGCGTGAACATCGATCACGTCGCCACGCTGCGCAACGCGCGCGGC
ACGTCCTATCCCGATCCGAT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MVTNEITHDDASGTRADAWMTLPAEADPDVDSDDATGARDEPFAPPAPAKPARPARSVKRGTSRKSGDDFSEDGGHAVAT
PRKTSARRSPSRVPRAAASEFRIGEQPAFVLHSYPYRETSLIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLN
WSGKSEMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLR
ETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWPVISGQTLLDMEQDDYHRAQTIAQSKTLMRFLLNIYLG
GTPLATRQILIDLQNL

Sequences:

>Translated_336_residues
MVTNEITHDDASGTRADAWMTLPAEADPDVDSDDATGARDEPFAPPAPAKPARPARSVKRGTSRKSGDDFSEDGGHAVAT
PRKTSARRSPSRVPRAAASEFRIGEQPAFVLHSYPYRETSLIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLN
WSGKSEMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLR
ETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWPVISGQTLLDMEQDDYHRAQTIAQSKTLMRFLLNIYLG
GTPLATRQILIDLQNL
>Mature_336_residues
MVTNEITHDDASGTRADAWMTLPAEADPDVDSDDATGARDEPFAPPAPAKPARPARSVKRGTSRKSGDDFSEDGGHAVAT
PRKTSARRSPSRVPRAAASEFRIGEQPAFVLHSYPYRETSLIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLN
WSGKSEMRTLTGAEWVGGMLPLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLR
ETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWPVISGQTLLDMEQDDYHRAQTIAQSKTLMRFLLNIYLG
GTPLATRQILIDLQNL

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=229, Percent_Identity=37.5545851528384, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 37248; Mature: 37248

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTNEITHDDASGTRADAWMTLPAEADPDVDSDDATGARDEPFAPPAPAKPARPARSVKR
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GTSRKSGDDFSEDGGHAVATPRKTSARRSPSRVPRAAASEFRIGEQPAFVLHSYPYRETS
CCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHCCHHHHHHCCCCCCCEEEEECCCCCHHH
LIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLNWSGKSEMRTLTGAEWVGGML
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCC
PLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLR
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWPVISGQTLLDMEQDDYHR
HCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCCCEECCCEEECCCCHHHHH
AQTIAQSKTLMRFLLNIYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC
>Mature Secondary Structure
MVTNEITHDDASGTRADAWMTLPAEADPDVDSDDATGARDEPFAPPAPAKPARPARSVKR
CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
GTSRKSGDDFSEDGGHAVATPRKTSARRSPSRVPRAAASEFRIGEQPAFVLHSYPYRETS
CCCCCCCCCCCCCCCEEEECCCHHHCCCCHHHCCHHHHHHCCCCCCCEEEEECCCCCHHH
LIIDVLSRDHGRIALVAKGAKRPHSALRGVLQTFQPLSLNWSGKSEMRTLTGAEWVGGML
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHCCCC
PLTGDALLCGFYVNELLVKFLAREDPHPQLFHHYVVTLTRLAHDEPPVQVLRSFERVLLR
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ETGYAMSLNRTVARKAVVPDGRYVFDPERGVREASDEYPSNWPVISGQTLLDMEQDDYHR
HCCCEEEHHHHHHHHHCCCCCCEEECCHHHHHHHHHCCCCCCCEECCCEEECCCCHHHHH
AQTIAQSKTLMRFLLNIYLGGTPLATRQILIDLQNL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA