The gene/protein map for NC_010622 is currently unavailable.
Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186475600

Identifier: 186475600

GI number: 186475600

Start: 933548

End: 934201

Strand: Direct

Name: 186475600

Synonym: Bphy_0835

Alternate gene names: NA

Gene position: 933548-934201 (Clockwise)

Preceding gene: 186475599

Following gene: 186475601

Centisome position: 26.83

GC content: 64.83

Gene sequence:

>654_bases
ATGGGGAGCATCATGGGGTCGGTTTCGGTGCCAATGCAAACAAACGCGCAAGCAAGCTCGCATGCCGAGCTTCTGTCTGC
TTTCGTCGACGGTGAACTGTTCGACGGCGAGCATCCGAACACAATTCTGGCCGCGCTGGATCAAAAAGATCGCGCGGCAT
GGTCGTGCTATCACCTGATCGGCGACGCGCTGCGTTCCGACGATCTGGCTGTCAGCCCGGCTACCAGCAGTGCCTTTCTG
GCGGGGTTTTCGGCCCGCTTCGAAAACGAGGCGCATGTGCTCGCACCGGCTGCCATGCCGGCCGCACGCCGTCTGCTCGC
CTTGCGCCGCCGAGTGATTCCCGCATTCGCCGTGGCGGCTGCGGCCGCGACGCTGACGTGGATCGTGATGCCGCAGCTGT
CGGGCATCGACACGGGTGCGGGCGTGACGCAGGTCGCGTCGGTCGCGCCGCACGGGGACTCGGTGCAGCGCGTGGCAATG
GCTTCGATGCCTGCCGCGACCACGGCCCAGGCGGAAGTATCAGACGGCAACATCATCCGCGACGCAAGCCTCGACCAATA
TCTGGAAGCGCATCAACAGTTCGGCCTGCAGCCTGTCGTATCGGGTTCGATGCCGTTGCTCCGCGCGGCTTCTCTGACCA
CGCAGGGCCACTAG

Upstream 100 bases:

>100_bases
AGGCAAGCGCTGGTAGCGGCTGTTGGACAGCGGCCAGCCGGCCTCGCGGACAGCGGCGCAGTATCTGGGTCAAGTGGTGT
CACTACGGGATGTCTGAAAG

Downstream 100 bases:

>100_bases
TCTGATGCAGAGTCTGCGGTTGAAAAAAACGACCATCTGGGGGCGGCTGCCGGCAATCCTGTTCTGCGCAGCCGTGCTCT
TGTCCGCTACGTCGCGCACC

Product: anti sigma-E protein, RseA

Products: NA

Alternate protein names: Anti Sigma-E Protein; Sigma Factor Negative Regulatory Protein RseA Family; Sigma Factor AlgU Regulatory Protein MucA; Anti Sigma-E Protein RseA Family Protein; Transmembrane SigmaE Factor Negative Regulator Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGSIMGSVSVPMQTNAQASSHAELLSAFVDGELFDGEHPNTILAALDQKDRAAWSCYHLIGDALRSDDLAVSPATSSAFL
AGFSARFENEAHVLAPAAMPAARRLLALRRRVIPAFAVAAAAATLTWIVMPQLSGIDTGAGVTQVASVAPHGDSVQRVAM
ASMPAATTAQAEVSDGNIIRDASLDQYLEAHQQFGLQPVVSGSMPLLRAASLTTQGH

Sequences:

>Translated_217_residues
MGSIMGSVSVPMQTNAQASSHAELLSAFVDGELFDGEHPNTILAALDQKDRAAWSCYHLIGDALRSDDLAVSPATSSAFL
AGFSARFENEAHVLAPAAMPAARRLLALRRRVIPAFAVAAAAATLTWIVMPQLSGIDTGAGVTQVASVAPHGDSVQRVAM
ASMPAATTAQAEVSDGNIIRDASLDQYLEAHQQFGLQPVVSGSMPLLRAASLTTQGH
>Mature_216_residues
GSIMGSVSVPMQTNAQASSHAELLSAFVDGELFDGEHPNTILAALDQKDRAAWSCYHLIGDALRSDDLAVSPATSSAFLA
GFSARFENEAHVLAPAAMPAARRLLALRRRVIPAFAVAAAAATLTWIVMPQLSGIDTGAGVTQVASVAPHGDSVQRVAMA
SMPAATTAQAEVSDGNIIRDASLDQYLEAHQQFGLQPVVSGSMPLLRAASLTTQGH

Specific function: Unknown

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22575; Mature: 22444

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIMGSVSVPMQTNAQASSHAELLSAFVDGELFDGEHPNTILAALDQKDRAAWSCYHLI
CCCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCHHHHHHHHHH
GDALRSDDLAVSPATSSAFLAGFSARFENEAHVLAPAAMPAARRLLALRRRVIPAFAVAA
HHHHCCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
AAATLTWIVMPQLSGIDTGAGVTQVASVAPHGDSVQRVAMASMPAATTAQAEVSDGNIIR
HHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCEEE
DASLDQYLEAHQQFGLQPVVSGSMPLLRAASLTTQGH
CCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
GSIMGSVSVPMQTNAQASSHAELLSAFVDGELFDGEHPNTILAALDQKDRAAWSCYHLI
CCCCCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCHHHHHHHHHH
GDALRSDDLAVSPATSSAFLAGFSARFENEAHVLAPAAMPAARRLLALRRRVIPAFAVAA
HHHHCCCCCEECCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
AAATLTWIVMPQLSGIDTGAGVTQVASVAPHGDSVQRVAMASMPAATTAQAEVSDGNIIR
HHHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEECCCCCEEE
DASLDQYLEAHQQFGLQPVVSGSMPLLRAASLTTQGH
CCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA