| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yceF [C]
Identifier: 186475589
GI number: 186475589
Start: 924368
End: 924988
Strand: Reverse
Name: yceF [C]
Synonym: Bphy_0824
Alternate gene names: 186475589
Gene position: 924988-924368 (Counterclockwise)
Preceding gene: 186475612
Following gene: 186475588
Centisome position: 26.59
GC content: 66.51
Gene sequence:
>621_bases ATGCCCGAATCCTCCAAACGCCCGCCCCGCCTGATCCTGGCATCGAGTTCACCCTATCGGCGCGAATTGCTCGAGCGCCT GCGCATCCCGTTCGACGTCGTCGTGCCCGCCATCGACGAAACGCCACTCCCCGGCGAATTGCCCGAACAAACCGCGCTGC GCCTCGCGCAGGCAAAAGCCCGCGCCGTCGCCGTGGCGCTTGCGGGCGACGGGCGCGCGCTCGTCATTGGCTCTGACCAG GTCGCGACCTACGACGGCCATCAGATCGGAAAGCCCGGCACGCATGAAAAGGCGCTGGCGCAACTGCAGGCAATGCGCGG CCGCGAGGTGCGCTTCCATAGCGCGCTTTGCCTGCTCGACAGCGTATCCGGCGGCGTCCAGACGATTAATGCAATCACCA AGGTACGCTTTCGCGACCTGCCCGATACCTTGCTCGACGCCTATCTGCGCGCCGAAACGCCGTACGACTGCGCAGGCAGC GCGAAAGCGGAAGGCCTCGGCATCGCGCTGCTCGACGCCATCGAATCCGACGATCCGACCGCGCTGATCGGCCTGCCGCT GATCGCTCTGACGCGCATGCTGCTAGCCGCGGGCTATCCACTGCTGGCGGAGGCACGATGA
Upstream 100 bases:
>100_bases TTGTCTTTTCGAGTCAAACACTTAAGGCGCGCTGCGCGGACATGTCCGCGCCCTGCCTTTCACACCCCGATTTACCGACC GATCAAGATTCTTCCCCAGC
Downstream 100 bases:
>100_bases GCGGCGTTCTCTACCTCATCCCCAATACACTCGGCGAAGGCGACACGGCCGCGCTCGATGCCGTCCTGCCCGCGCCCGTG CGCGCACGCGCGGCGGCCCT
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MPESSKRPPRLILASSSPYRRELLERLRIPFDVVVPAIDETPLPGELPEQTALRLAQAKARAVAVALAGDGRALVIGSDQ VATYDGHQIGKPGTHEKALAQLQAMRGREVRFHSALCLLDSVSGGVQTINAITKVRFRDLPDTLLDAYLRAETPYDCAGS AKAEGLGIALLDAIESDDPTALIGLPLIALTRMLLAAGYPLLAEAR
Sequences:
>Translated_206_residues MPESSKRPPRLILASSSPYRRELLERLRIPFDVVVPAIDETPLPGELPEQTALRLAQAKARAVAVALAGDGRALVIGSDQ VATYDGHQIGKPGTHEKALAQLQAMRGREVRFHSALCLLDSVSGGVQTINAITKVRFRDLPDTLLDAYLRAETPYDCAGS AKAEGLGIALLDAIESDDPTALIGLPLIALTRMLLAAGYPLLAEAR >Mature_205_residues PESSKRPPRLILASSSPYRRELLERLRIPFDVVVPAIDETPLPGELPEQTALRLAQAKARAVAVALAGDGRALVIGSDQV ATYDGHQIGKPGTHEKALAQLQAMRGREVRFHSALCLLDSVSGGVQTINAITKVRFRDLPDTLLDAYLRAETPYDCAGSA KAEGLGIALLDAIESDDPTALIGLPLIALTRMLLAAGYPLLAEAR
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=202, Percent_Identity=28.7128712871287, Blast_Score=72, Evalue=3e-13, Organism=Escherichia coli, GI87081830, Length=190, Percent_Identity=47.8947368421053, Blast_Score=169, Evalue=1e-43, Organism=Escherichia coli, GI1789646, Length=196, Percent_Identity=33.1632653061224, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193202443, Length=191, Percent_Identity=27.7486910994764, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 22025; Mature: 21894
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESSKRPPRLILASSSPYRRELLERLRIPFDVVVPAIDETPLPGELPEQTALRLAQAKA CCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH RAVAVALAGDGRALVIGSDQVATYDGHQIGKPGTHEKALAQLQAMRGREVRFHSALCLLD HEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH SVSGGVQTINAITKVRFRDLPDTLLDAYLRAETPYDCAGSAKAEGLGIALLDAIESDDPT HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHCCCCCE ALIGLPLIALTRMLLAAGYPLLAEAR EEEHHHHHHHHHHHHHCCCCCEECCC >Mature Secondary Structure PESSKRPPRLILASSSPYRRELLERLRIPFDVVVPAIDETPLPGELPEQTALRLAQAKA CCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH RAVAVALAGDGRALVIGSDQVATYDGHQIGKPGTHEKALAQLQAMRGREVRFHSALCLLD HEEEEEEECCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH SVSGGVQTINAITKVRFRDLPDTLLDAYLRAETPYDCAGSAKAEGLGIALLDAIESDDPT HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHCCCCCE ALIGLPLIALTRMLLAAGYPLLAEAR EEEHHHHHHHHHHHHHCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA