Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 186475588

GI number: 186475588

Start: 923652

End: 924371

Strand: Reverse

Name: rsmI [H]

Synonym: Bphy_0823

Alternate gene names: 186475588

Gene position: 924371-923652 (Counterclockwise)

Preceding gene: 186475589

Following gene: 186475583

Centisome position: 26.57

GC content: 63.47

Gene sequence:

>720_bases
ATGAGCGGCGTTCTCTACCTCATCCCCAATACACTCGGCGAAGGCGACACGGCCGCGCTCGATGCCGTCCTGCCCGCGCC
CGTGCGCGCACGCGCGGCGGCCCTGCACTATTACATAGGCGAGAACGCGAAAACGACACGCGCATTCCTGAAGAAGGTCG
ACACGGAGCGGCCGATCCAGGAAATCGAGATTCGCGAACTGAACGTCAACACACCGGCCGGTGATATCGACAAACTGCTG
GCGCCAGTCCTGGCGGGGACCGATGCGGGTCTCGTGTCAGAAGCCGGATGCCCCGCTGTCGCCGACCCGGGCGCGCTGCT
CGTGCGCCGCGCGCATGAGCGCGGCGTGAAAGTGGTCCCGTTGGTCGGGCCCAGCTCGATCCTGCTCGCGCTGATGGCGT
CGGGACTGAATGGCCAGAGCTTTGCGTTTCAGGGCTACCTGCCCGTCGACGCGAACGAACGCGCGAAACGCCTGCGCGAA
CTCGAACAGCAGTCGCGCAAAGCAAAGCAGACGCAAGTCTTTATCGAAACGCCGTACCGGAATCGGGCGTTGCTCGATAC
GTTGATCGCGACGTGCGCGCCGTCGACGCTCGTGTGCGTTGCTGTCGATCTGACGCTGGAAGGTGAAACGATTGTCACCC
AGACGGTCGCCGACTGGAAGAAGAAGCCGGCGCCTGAACTCCACAAGCGCCCGGCGATTTTTCTGATTCTGGCGAACTGA

Upstream 100 bases:

>100_bases
CCATCGAATCCGACGATCCGACCGCGCTGATCGGCCTGCCGCTGATCGCTCTGACGCGCATGCTGCTAGCCGCGGGCTAT
CCACTGCTGGCGGAGGCACG

Downstream 100 bases:

>100_bases
CGCCCAGGAAGGCGGCCGCCAGATGTCGGCCGCCGCTCCCAGGCTCCCACGAGCACTTATCGCAGGTTCAATTTCCCGAT
CGTAGCCATCGCGCGCACGG

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSGVLYLIPNTLGEGDTAALDAVLPAPVRARAAALHYYIGENAKTTRAFLKKVDTERPIQEIEIRELNVNTPAGDIDKLL
APVLAGTDAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFQGYLPVDANERAKRLRE
LEQQSRKAKQTQVFIETPYRNRALLDTLIATCAPSTLVCVAVDLTLEGETIVTQTVADWKKKPAPELHKRPAIFLILAN

Sequences:

>Translated_239_residues
MSGVLYLIPNTLGEGDTAALDAVLPAPVRARAAALHYYIGENAKTTRAFLKKVDTERPIQEIEIRELNVNTPAGDIDKLL
APVLAGTDAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFQGYLPVDANERAKRLRE
LEQQSRKAKQTQVFIETPYRNRALLDTLIATCAPSTLVCVAVDLTLEGETIVTQTVADWKKKPAPELHKRPAIFLILAN
>Mature_238_residues
SGVLYLIPNTLGEGDTAALDAVLPAPVRARAAALHYYIGENAKTTRAFLKKVDTERPIQEIEIRELNVNTPAGDIDKLLA
PVLAGTDAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFQGYLPVDANERAKRLREL
EQQSRKAKQTQVFIETPYRNRALLDTLIATCAPSTLVCVAVDLTLEGETIVTQTVADWKKKPAPELHKRPAIFLILAN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=149, Percent_Identity=36.241610738255, Blast_Score=88, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25679; Mature: 25548

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVLYLIPNTLGEGDTAALDAVLPAPVRARAAALHYYIGENAKTTRAFLKKVDTERPIQ
CCCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCHH
EIEIRELNVNTPAGDIDKLLAPVLAGTDAGLVSEAGCPAVADPGALLVRRAHERGVKVVP
HEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
LVGPSSILLALMASGLNGQSFAFQGYLPVDANERAKRLRELEQQSRKAKQTQVFIETPYR
EECHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCC
NRALLDTLIATCAPSTLVCVAVDLTLEGETIVTQTVADWKKKPAPELHKRPAIFLILAN
CHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCHHHCCCEEEEEEEC
>Mature Secondary Structure 
SGVLYLIPNTLGEGDTAALDAVLPAPVRARAAALHYYIGENAKTTRAFLKKVDTERPIQ
CCEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHEEEECCCCHHHHHHHHHHCCCCCHH
EIEIRELNVNTPAGDIDKLLAPVLAGTDAGLVSEAGCPAVADPGALLVRRAHERGVKVVP
HEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
LVGPSSILLALMASGLNGQSFAFQGYLPVDANERAKRLRELEQQSRKAKQTQVFIETPYR
EECHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCC
NRALLDTLIATCAPSTLVCVAVDLTLEGETIVTQTVADWKKKPAPELHKRPAIFLILAN
CHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEHHHHHHHHCCCCCHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]