| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475551
Identifier: 186475551
GI number: 186475551
Start: 881922
End: 882398
Strand: Reverse
Name: 186475551
Synonym: Bphy_0786
Alternate gene names: NA
Gene position: 882398-881922 (Counterclockwise)
Preceding gene: 186475554
Following gene: 186475550
Centisome position: 25.36
GC content: 67.92
Gene sequence:
>477_bases ATGCGACTCGTTTTCCGCATCGACTCGAACCCGGTTCCGCTGCTGCCCGCCGGCTTCGCCGTGTGCGTGGCCTTCGCGCT GTCAGCGCTGCCCGCCTGCGCGATCGCGCAGAAATCCATGAGCGCCGCCGCACAGGCTCTGTCGGCCGCGCAACAGTCCA CGGACCCTGCCGCAGATAAAACATTGAACGCGGCGGCAGCTTCCGATACGGCGGTGATCGCCGGTGAAACCGATTTAAAC GGCGCGCAGGTGCTGAACGTGCCCGCCGACGGCGCGGCGACGAACGGCATCGCGCTCGACGACCAGATGTTGTCGCGCCA GCGCGGCGGCGCCGCGGACATGGTGATGGTCGCGGCGCCGCCGCAGTTGATGCACGGCTCATCGGTGACGCTGTGGGACG AAATCGCTCCGCCCTCGCCGCTGCCCGTACCCATCGACGCCGCGCAAGGCAACGTCGCGAACTACCAGCGGAAGTAG
Upstream 100 bases:
>100_bases CGCGCCTCGTCCGATCCATTTCAGTCCCTCCCAATTGCAGCAATGGATTGCGACGGATGGCACATGTTTCGCTAAATCTC CCGCACCTAGGAGAGACACC
Downstream 100 bases:
>100_bases CACGGCGTCACGGCATCGCACGCACCGATTAAACAAGACGCAGACCAGTGCTAACTACTTCGCGGTCCATAACGATTAAG TCAGCGATACGTAAAACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MRLVFRIDSNPVPLLPAGFAVCVAFALSALPACAIAQKSMSAAAQALSAAQQSTDPAADKTLNAAAASDTAVIAGETDLN GAQVLNVPADGAATNGIALDDQMLSRQRGGAADMVMVAAPPQLMHGSSVTLWDEIAPPSPLPVPIDAAQGNVANYQRK
Sequences:
>Translated_158_residues MRLVFRIDSNPVPLLPAGFAVCVAFALSALPACAIAQKSMSAAAQALSAAQQSTDPAADKTLNAAAASDTAVIAGETDLN GAQVLNVPADGAATNGIALDDQMLSRQRGGAADMVMVAAPPQLMHGSSVTLWDEIAPPSPLPVPIDAAQGNVANYQRK >Mature_158_residues MRLVFRIDSNPVPLLPAGFAVCVAFALSALPACAIAQKSMSAAAQALSAAQQSTDPAADKTLNAAAASDTAVIAGETDLN GAQVLNVPADGAATNGIALDDQMLSRQRGGAADMVMVAAPPQLMHGSSVTLWDEIAPPSPLPVPIDAAQGNVANYQRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15990; Mature: 15990
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVFRIDSNPVPLLPAGFAVCVAFALSALPACAIAQKSMSAAAQALSAAQQSTDPAADK CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TLNAAAASDTAVIAGETDLNGAQVLNVPADGAATNGIALDDQMLSRQRGGAADMVMVAAP HCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEECHHHHHHCCCCCCCEEEEECC PQLMHGSSVTLWDEIAPPSPLPVPIDAAQGNVANYQRK HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLVFRIDSNPVPLLPAGFAVCVAFALSALPACAIAQKSMSAAAQALSAAQQSTDPAADK CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHH TLNAAAASDTAVIAGETDLNGAQVLNVPADGAATNGIALDDQMLSRQRGGAADMVMVAAP HCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEEECHHHHHHCCCCCCCEEEEECC PQLMHGSSVTLWDEIAPPSPLPVPIDAAQGNVANYQRK HHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA