| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475554
Identifier: 186475554
GI number: 186475554
Start: 885629
End: 888175
Strand: Reverse
Name: 186475554
Synonym: Bphy_0789
Alternate gene names: NA
Gene position: 888175-885629 (Counterclockwise)
Preceding gene: 186475555
Following gene: 186475551
Centisome position: 25.53
GC content: 69.65
Gene sequence:
>2547_bases ATGAAATCACTCACCACCTACGCTCAACCTGCCTCGCGACGCGGCGCACGTCGCACCTCGCTCGTCGCGCTTGCGGTCGC CGGCGCCCTGACGACATTCGCGTGGCAGCCGAGCTGGGCGCAGCAGGCGCCGCCGCCCGCCAACTTTGCGCAAAGCGCGC CGGATGGCGATCCGCCCGGACGCGTCGCCCGTCTGAATTACATGGCGGGCACGGTCACGACCGAACCGGCGGGCGCCTCG GACTGGTCGTATGCGCAGGTCAACCGGCCGCTCACGACGGGCGACCAGTTGTGGAACGCCGGGAACGCGCGCTCGGAGCT GCACATCGGCTCGACAGCCGTGCGCATGGGCGAACAGACCAGCCTCGACATCCTGAATCTCGACGACAGCAGCGCGCAGC TGAAAGTCGCGCAAGGCACGCTGTCGACGCGCGTGCGCGCAATCGCGCCAGGTTCGACGTATGAGATCGACACGCCGAAT CTCGCGCTGGGCCTGAACACACCCGGCGACTATCGCGTCGACGTCGCGCCCGACGGCAGCAGCACGACCGTAACTGTGCG CAGCGGCAGCGCAACCGTCTACGGCGACAACGGGCAGCTGCCCATCGGCGCCGGACAGCAGGTCACCTTCACGGGCACGA GCCTGCAGCAGGCGGCCGCCAACGGCGCGCCTGGACCCGACGCGTTCGATCAATGGGCCGCGAACCGCGACGCCGCCGAG GACCGCTCGGTGTCGGCGCGCTATGTGTCGCGCGAAATGCCCGGCTATCAGGACCTCGACGCGAACGGCACCTGGCGCAG CACGCCGCAGTACGGCCAGGTGTGGGTGCCGAATCAGGAGCCCGAAGGCTGGGCTCCGTATCGCGACGGTCACTGGGTCT GGCAGGCACCGTGGGGCTGGACGTGGGTCGACGACGCGCCGTGGGGCTTCGCGCCGTATCACTACGGTCGCTGGGCTTAT GTCGACGATTCATGGGCGTGGGTGCCGGGCCAGGCTGTCGTCAGCGAGCCGCCTGTGTACGCCCCTGCCCTCGTCGCGTT CGTCGGCGATGGCGGCAGCGACTGGAGCGTGAATCTGGCCGTCGGCGGCGTCGCGGCCGCGGGCCTCGCGTGGTTCGCGC TCGGTCCGGGCGAGCCGTGGCATCCGCACTGGGGCCGCGATCACGACTGGAGCCCGCGTTATTACGATCGCGTGAACAAC ACGGTCATCGTCAACAACCGCGTCGATATCCGTAACAACGTCCACAACACGTATATCAACTACCGTGCGCCGGGCGCCGT GACGGCGATGCCGGCAGCGGCGTTCGTGCACGGCCAGCCGACCAACCATTTCGCCCACCGCGTCGATCCCGCCCAATGGC ACAACGCGCGCTTCAATGCGGGGGCGCCGGGCATCGCGCCCGTCCAGCAGAGCTTCGGACCGGGGATGCGCAATGCCGCT TACCGCCCGCCCGCTAACGCGATGGCGCGGCCTGTCGTCGGCACGCGTAGCCCCGCTGTCCCGGCTGCGTTTCACGACCG TCTCGCGCAGCACTTCGGCCAAGGCGGCCACGGCCGTGTGCCGGGTGCGGGCGAGCCGATCGTGCGTACCTCCGTGCCGG CGCATTTCTCCGGGAAGACGCTCGGCGGCAACGGGCCTGTCGCGAACGTTCGCGTCGTGAATTCGCATGCGCCCGGCCAG ACGGCGGGCGGGCCGGGCGCTCAACGCCCGAGCGGGCCGATGCCGCAAATGGAGGGACGACAGCAAGGCGCTCCGGGACG GGGCTTCGCGCCGGGGCAGATGGCGGGCGGGTCAGGCGGTCAGCGTCCCGGCGCCGGCGAGCCGCAGGCCAACGGCCAGC AGCAACACGGCATGCCGATGCAGGCAGGCAACGGTGTACCGCGTCCGCCTCAATTCGCCGGCGGCCAGCCGTTGAGCAAT ATGCGTCAACAGCCTGGACAAGCGGATGGTGCGCAACATCCCGACATGGCGGCGGTCCAGCGGCATGAGCCTGCATGGAC CCAACAACACGCGCCGATGGCGCAGCAACGCGGCAATCCGCAGCAGTTCGGCGCGGCACAGGCGCCCGGACAGCATCCGT CGTCTGGGCAACCAGGACAGGTTAGCGAGCAGCATGAGCGGATGCAGCAGAGGCCTGGGATTGCTTTTGGCGGCGCCGCT CCAGTGCAGCCGCCGCATCGGCCGGACACGCACGGACAGCAGACGGCCGCGCCAGTGCAACAGGCTCAGCCTCAACCGCA TCCGGACACGCGGCCGCAGCAGCAAGCGCGCCAAGAGTTTCATCCGCAGCCTCAGCCTCAGCCGCAAGCACGCCAGGAAT TCCACCCGCAGCCTCAGCCGCAGCCGCAGGCACGCCAGGAATTCCACCCGCAGCCGCAGCCGCCACAGCAAGCGCGACAG GAGTTCCATGCGCAGCCGCAGCCGCAAGCTCAGCCGCGTCCGGAACCTCGTCCGCCGCAACAGGCGCAGCATCCGCAACC GCAACCGCAGCCGCATCAGGAACAACGCGCGACGGGCGGTGGGCACGACGAGCATCATCGCGGCTAA
Upstream 100 bases:
>100_bases GTCTGGATGGCTTACAAATGAGTGCGCCTTGAAACAGGGGCGGCGGGTAGAGTCATTTCACACGGCGTCGCCTGATGCGG CGCCCGATGGAGCGACAACC
Downstream 100 bases:
>100_bases ACCCGCGCCGCATGGCGCCCGCGAATGAAAACGCCCACCGCGAATGGCAGTGGGCGTTTTCACATCGGGGACAATCAGCC GTTGCGCTCAGATCGCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Prolin-Rich Exported Protein; Proline-Rich Transmembrane Protein; Chromosome Segregation ATPase; Proline-Rich Exported Protein; Chromosome Segregation ATPases; Secreted Protein
Number of amino acids: Translated: 848; Mature: 848
Protein sequence:
>848_residues MKSLTTYAQPASRRGARRTSLVALAVAGALTTFAWQPSWAQQAPPPANFAQSAPDGDPPGRVARLNYMAGTVTTEPAGAS DWSYAQVNRPLTTGDQLWNAGNARSELHIGSTAVRMGEQTSLDILNLDDSSAQLKVAQGTLSTRVRAIAPGSTYEIDTPN LALGLNTPGDYRVDVAPDGSSTTVTVRSGSATVYGDNGQLPIGAGQQVTFTGTSLQQAAANGAPGPDAFDQWAANRDAAE DRSVSARYVSREMPGYQDLDANGTWRSTPQYGQVWVPNQEPEGWAPYRDGHWVWQAPWGWTWVDDAPWGFAPYHYGRWAY VDDSWAWVPGQAVVSEPPVYAPALVAFVGDGGSDWSVNLAVGGVAAAGLAWFALGPGEPWHPHWGRDHDWSPRYYDRVNN TVIVNNRVDIRNNVHNTYINYRAPGAVTAMPAAAFVHGQPTNHFAHRVDPAQWHNARFNAGAPGIAPVQQSFGPGMRNAA YRPPANAMARPVVGTRSPAVPAAFHDRLAQHFGQGGHGRVPGAGEPIVRTSVPAHFSGKTLGGNGPVANVRVVNSHAPGQ TAGGPGAQRPSGPMPQMEGRQQGAPGRGFAPGQMAGGSGGQRPGAGEPQANGQQQHGMPMQAGNGVPRPPQFAGGQPLSN MRQQPGQADGAQHPDMAAVQRHEPAWTQQHAPMAQQRGNPQQFGAAQAPGQHPSSGQPGQVSEQHERMQQRPGIAFGGAA PVQPPHRPDTHGQQTAAPVQQAQPQPHPDTRPQQQARQEFHPQPQPQPQARQEFHPQPQPQPQARQEFHPQPQPPQQARQ EFHAQPQPQAQPRPEPRPPQQAQHPQPQPQPHQEQRATGGGHDEHHRG
Sequences:
>Translated_848_residues MKSLTTYAQPASRRGARRTSLVALAVAGALTTFAWQPSWAQQAPPPANFAQSAPDGDPPGRVARLNYMAGTVTTEPAGAS DWSYAQVNRPLTTGDQLWNAGNARSELHIGSTAVRMGEQTSLDILNLDDSSAQLKVAQGTLSTRVRAIAPGSTYEIDTPN LALGLNTPGDYRVDVAPDGSSTTVTVRSGSATVYGDNGQLPIGAGQQVTFTGTSLQQAAANGAPGPDAFDQWAANRDAAE DRSVSARYVSREMPGYQDLDANGTWRSTPQYGQVWVPNQEPEGWAPYRDGHWVWQAPWGWTWVDDAPWGFAPYHYGRWAY VDDSWAWVPGQAVVSEPPVYAPALVAFVGDGGSDWSVNLAVGGVAAAGLAWFALGPGEPWHPHWGRDHDWSPRYYDRVNN TVIVNNRVDIRNNVHNTYINYRAPGAVTAMPAAAFVHGQPTNHFAHRVDPAQWHNARFNAGAPGIAPVQQSFGPGMRNAA YRPPANAMARPVVGTRSPAVPAAFHDRLAQHFGQGGHGRVPGAGEPIVRTSVPAHFSGKTLGGNGPVANVRVVNSHAPGQ TAGGPGAQRPSGPMPQMEGRQQGAPGRGFAPGQMAGGSGGQRPGAGEPQANGQQQHGMPMQAGNGVPRPPQFAGGQPLSN MRQQPGQADGAQHPDMAAVQRHEPAWTQQHAPMAQQRGNPQQFGAAQAPGQHPSSGQPGQVSEQHERMQQRPGIAFGGAA PVQPPHRPDTHGQQTAAPVQQAQPQPHPDTRPQQQARQEFHPQPQPQPQARQEFHPQPQPQPQARQEFHPQPQPPQQARQ EFHAQPQPQAQPRPEPRPPQQAQHPQPQPQPHQEQRATGGGHDEHHRG >Mature_848_residues MKSLTTYAQPASRRGARRTSLVALAVAGALTTFAWQPSWAQQAPPPANFAQSAPDGDPPGRVARLNYMAGTVTTEPAGAS DWSYAQVNRPLTTGDQLWNAGNARSELHIGSTAVRMGEQTSLDILNLDDSSAQLKVAQGTLSTRVRAIAPGSTYEIDTPN LALGLNTPGDYRVDVAPDGSSTTVTVRSGSATVYGDNGQLPIGAGQQVTFTGTSLQQAAANGAPGPDAFDQWAANRDAAE DRSVSARYVSREMPGYQDLDANGTWRSTPQYGQVWVPNQEPEGWAPYRDGHWVWQAPWGWTWVDDAPWGFAPYHYGRWAY VDDSWAWVPGQAVVSEPPVYAPALVAFVGDGGSDWSVNLAVGGVAAAGLAWFALGPGEPWHPHWGRDHDWSPRYYDRVNN TVIVNNRVDIRNNVHNTYINYRAPGAVTAMPAAAFVHGQPTNHFAHRVDPAQWHNARFNAGAPGIAPVQQSFGPGMRNAA YRPPANAMARPVVGTRSPAVPAAFHDRLAQHFGQGGHGRVPGAGEPIVRTSVPAHFSGKTLGGNGPVANVRVVNSHAPGQ TAGGPGAQRPSGPMPQMEGRQQGAPGRGFAPGQMAGGSGGQRPGAGEPQANGQQQHGMPMQAGNGVPRPPQFAGGQPLSN MRQQPGQADGAQHPDMAAVQRHEPAWTQQHAPMAQQRGNPQQFGAAQAPGQHPSSGQPGQVSEQHERMQQRPGIAFGGAA PVQPPHRPDTHGQQTAAPVQQAQPQPHPDTRPQQQARQEFHPQPQPQPQARQEFHPQPQPQPQARQEFHPQPQPPQQARQ EFHAQPQPQAQPRPEPRPPQQAQHPQPQPQPHQEQRATGGGHDEHHRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90872; Mature: 90872
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLTTYAQPASRRGARRTSLVALAVAGALTTFAWQPSWAQQAPPPANFAQSAPDGDPPG CCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCCCCCCCCC RVARLNYMAGTVTTEPAGASDWSYAQVNRPLTTGDQLWNAGNARSELHIGSTAVRMGEQT CEEEEEEEECEEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEEECHHHHHCCCCC SLDILNLDDSSAQLKVAQGTLSTRVRAIAPGSTYEIDTPNLALGLNTPGDYRVDVAPDGS CEEEEECCCCCCEEEEECCHHHHCEEEECCCCEEEECCCCEEEECCCCCCEEEEECCCCC STTVTVRSGSATVYGDNGQLPIGAGQQVTFTGTSLQQAAANGAPGPDAFDQWAANRDAAE CCEEEEECCCEEEECCCCCEECCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHCCCCCCH DRSVSARYVSREMPGYQDLDANGTWRSTPQYGQVWVPNQEPEGWAPYRDGHWVWQAPWGW HHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCC TWVDDAPWGFAPYHYGRWAYVDDSWAWVPGQAVVSEPPVYAPALVAFVGDGGSDWSVNLA EECCCCCCCCCCCCCCCEEEECCCEEECCCCHHCCCCCCCCCEEEEEECCCCCCEEEEEE VGGVAAAGLAWFALGPGEPWHPHWGRDHDWSPRYYDRVNNTVIVNNRVDIRNNVHNTYIN ECCHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEE YRAPGAVTAMPAAAFVHGQPTNHFAHRVDPAQWHNARFNAGAPGIAPVQQSFGPGMRNAA EECCCCCCCCCHHHEECCCCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC YRPPANAMARPVVGTRSPAVPAAFHDRLAQHFGQGGHGRVPGAGEPIVRTSVPAHFSGKT CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCE LGGNGPVANVRVVNSHAPGQTAGGPGAQRPSGPMPQMEGRQQGAPGRGFAPGQMAGGSGG ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QRPGAGEPQANGQQQHGMPMQAGNGVPRPPQFAGGQPLSNMRQQPGQADGAQHPDMAAVQ CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHH RHEPAWTQQHAPMAQQRGNPQQFGAAQAPGQHPSSGQPGQVSEQHERMQQRPGIAFGGAA HCCCCHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCC PVQPPHRPDTHGQQTAAPVQQAQPQPHPDTRPQQQARQEFHPQPQPQPQARQEFHPQPQP CCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCC QPQARQEFHPQPQPPQQARQEFHAQPQPQAQPRPEPRPPQQAQHPQPQPQPHQEQRATGG CCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC GHDEHHRG CCCCCCCC >Mature Secondary Structure MKSLTTYAQPASRRGARRTSLVALAVAGALTTFAWQPSWAQQAPPPANFAQSAPDGDPPG CCCCCCHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHCCCCCCCCC RVARLNYMAGTVTTEPAGASDWSYAQVNRPLTTGDQLWNAGNARSELHIGSTAVRMGEQT CEEEEEEEECEEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCEEEECHHHHHCCCCC SLDILNLDDSSAQLKVAQGTLSTRVRAIAPGSTYEIDTPNLALGLNTPGDYRVDVAPDGS CEEEEECCCCCCEEEEECCHHHHCEEEECCCCEEEECCCCEEEECCCCCCEEEEECCCCC STTVTVRSGSATVYGDNGQLPIGAGQQVTFTGTSLQQAAANGAPGPDAFDQWAANRDAAE CCEEEEECCCEEEECCCCCEECCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHCCCCCCH DRSVSARYVSREMPGYQDLDANGTWRSTPQYGQVWVPNQEPEGWAPYRDGHWVWQAPWGW HHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCCCC TWVDDAPWGFAPYHYGRWAYVDDSWAWVPGQAVVSEPPVYAPALVAFVGDGGSDWSVNLA EECCCCCCCCCCCCCCCEEEECCCEEECCCCHHCCCCCCCCCEEEEEECCCCCCEEEEEE VGGVAAAGLAWFALGPGEPWHPHWGRDHDWSPRYYDRVNNTVIVNNRVDIRNNVHNTYIN ECCHHHHCEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCEEEE YRAPGAVTAMPAAAFVHGQPTNHFAHRVDPAQWHNARFNAGAPGIAPVQQSFGPGMRNAA EECCCCCCCCCHHHEECCCCCCHHHHCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCC YRPPANAMARPVVGTRSPAVPAAFHDRLAQHFGQGGHGRVPGAGEPIVRTSVPAHFSGKT CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCE LGGNGPVANVRVVNSHAPGQTAGGPGAQRPSGPMPQMEGRQQGAPGRGFAPGQMAGGSGG ECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QRPGAGEPQANGQQQHGMPMQAGNGVPRPPQFAGGQPLSNMRQQPGQADGAQHPDMAAVQ CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHH RHEPAWTQQHAPMAQQRGNPQQFGAAQAPGQHPSSGQPGQVSEQHERMQQRPGIAFGGAA HCCCCHHHHCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCC PVQPPHRPDTHGQQTAAPVQQAQPQPHPDTRPQQQARQEFHPQPQPQPQARQEFHPQPQP CCCCCCCCCCCCCHHHCCHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCCCC QPQARQEFHPQPQPPQQARQEFHAQPQPQAQPRPEPRPPQQAQHPQPQPQPHQEQRATGG CCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC GHDEHHRG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA