| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dfrA [H]
Identifier: 186475547
GI number: 186475547
Start: 876873
End: 877373
Strand: Reverse
Name: dfrA [H]
Synonym: Bphy_0782
Alternate gene names: 186475547
Gene position: 877373-876873 (Counterclockwise)
Preceding gene: 186475548
Following gene: 186475545
Centisome position: 25.22
GC content: 61.68
Gene sequence:
>501_bases ATGACGACGCTCACCCTGATCGTCGCTCGCGCCCGCAATGGCGTGATCGGCCGTGACAACCAGCTGCCCTGGCGGCTTCC CGAAGACCTCGCTTTCTTCAAGCGCACGACGATGGGCGCACCCATCGTGATGGGGCGCAAGACGCATGAATCAATTGGCC GTGTGTTGCCGGGGCGGCGCAATATCGTCGTGACGCGCGATGCGCAGCGCCGCTTCGAGGGCTGCGATACCGTGACGAAT CTCGACGACGCGTTGGCGCTCGCCGCGCGCGATGGTGCGGGCGAGGCGTTTTTGATAGGCGGTGCGCAGCTGTATGAGGA AGGGTTGCGGCGCGCGGACAAAATGATCGTGACTGAAATTCACGCCGATTTCGATGGCGATGCCTGGTTTCCTGCGCCTG ATGTGGCGCACTGGCAAGAGGTCTCGCGGGAGACGCATCAGGCCAAAGAGCCCAATGACTTTGAATATGCCTTTGTGGTT TATCGGCGCCTTGCCACTTGA
Upstream 100 bases:
>100_bases TTTCGGCTCGCGTTTCGGCAAGCGTTCGGCTGGACGGCAGGCTGTCGGGTAGAATCGGCGTTCGCTTTCGTACCCTGCTC CCTACCGCTTTTTCATTCGC
Downstream 100 bases:
>100_bases GGTTGATGGGTATTTTTGTCGGCGACGCTTCTAGTTGGTTGGTTTTTGGTTTTTTTTGCCGGCATCCGCGTTTTGCCTTC GTACTCATGCGTTGCCCCTG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTTLTLIVARARNGVIGRDNQLPWRLPEDLAFFKRTTMGAPIVMGRKTHESIGRVLPGRRNIVVTRDAQRRFEGCDTVTN LDDALALAARDGAGEAFLIGGAQLYEEGLRRADKMIVTEIHADFDGDAWFPAPDVAHWQEVSRETHQAKEPNDFEYAFVV YRRLAT
Sequences:
>Translated_166_residues MTTLTLIVARARNGVIGRDNQLPWRLPEDLAFFKRTTMGAPIVMGRKTHESIGRVLPGRRNIVVTRDAQRRFEGCDTVTN LDDALALAARDGAGEAFLIGGAQLYEEGLRRADKMIVTEIHADFDGDAWFPAPDVAHWQEVSRETHQAKEPNDFEYAFVV YRRLAT >Mature_165_residues TTLTLIVARARNGVIGRDNQLPWRLPEDLAFFKRTTMGAPIVMGRKTHESIGRVLPGRRNIVVTRDAQRRFEGCDTVTNL DDALALAARDGAGEAFLIGGAQLYEEGLRRADKMIVTEIHADFDGDAWFPAPDVAHWQEVSRETHQAKEPNDFEYAFVVY RRLAT
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=182, Percent_Identity=29.6703296703297, Blast_Score=77, Evalue=9e-15, Organism=Escherichia coli, GI1786233, Length=164, Percent_Identity=40.8536585365854, Blast_Score=122, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17505899, Length=184, Percent_Identity=29.8913043478261, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI116008026, Length=182, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24647458, Length=182, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18668; Mature: 18537
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLTLIVARARNGVIGRDNQLPWRLPEDLAFFKRTTMGAPIVMGRKTHESIGRVLPGRR CCHHEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCC NIVVTRDAQRRFEGCDTVTNLDDALALAARDGAGEAFLIGGAQLYEEGLRRADKMIVTEI CEEEECCHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHE HADFDGDAWFPAPDVAHWQEVSRETHQAKEPNDFEYAFVVYRRLAT ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure TTLTLIVARARNGVIGRDNQLPWRLPEDLAFFKRTTMGAPIVMGRKTHESIGRVLPGRR CHHEEEEEHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCHHHHHHHCCCCC NIVVTRDAQRRFEGCDTVTNLDDALALAARDGAGEAFLIGGAQLYEEGLRRADKMIVTEI CEEEECCHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHE HADFDGDAWFPAPDVAHWQEVSRETHQAKEPNDFEYAFVVYRRLAT ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]