| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is paaF [C]
Identifier: 186475522
GI number: 186475522
Start: 853815
End: 854624
Strand: Direct
Name: paaF [C]
Synonym: Bphy_0757
Alternate gene names: 186475522
Gene position: 853815-854624 (Clockwise)
Preceding gene: 186475521
Following gene: 186475524
Centisome position: 24.54
GC content: 64.81
Gene sequence:
>810_bases ATGAATGCAGAGGCGACAGGCGCACTGATCGAACGCACGCGAGACGCGTATGACCTCGGCGGGGTGGTGCGCCTCACGTT GAACCGGCCGGACGCGTTCAATGCTCTTTCCGAGGCGCTGCTCGATGAGCTTCAGATGCATCTTGCAGACATCGCGAAGA GCGATGCGCGCGTGGTCGTGATCGCGGGTGCGGGCCGCGCGTTTTGTGCAGGACATGATCTGCGTGAAATGCGCGCGGCG CCGTCGCTCGATTACTACCAGTCGCTGTTCGCGCGCTGCACAAAAATGATGCTTGCGATCCAGCGGCTGCCGCAGCCGGT GATCGCTCGCGTGCACGGCATTGCGACGGCGGCGGGCTGTCAGCTCGTCGCGATGTGCGATCTCGCGGTCGCCGCCGATA CAGCGCGCTTCGCGGTGTCGGGAGTGAATCTCGGGCTCTTCTGTGCGACGCCGTCCGTGCCGCTGTCGCGCAACCTGTCG CGCAAGGCTGCGCTCGACATGCTGCTGACGGGCGATTTCATCGACGCGATGGCCGCGAAGCAGCAAGGTCTCGTGAATCG CGTGGTGCCGATGGACGCGCTCGACAACGAAGTCGCCGCGCTCGCGAAGAGCATCTGCGCGAAGCCACGCGAGGCCATCG AAGCGGGCAAGGGTCTTTTCTACCGGCAACTCGAAATGGGCATCGAAGCCGCGTATCAACTGGCCGGGCAAACGATGGCG TGCAACATGATGGACGAGTCGGCGCTCGAAGGCGTGCAGGCGTTCATCGACAAGCGGCCGCCCGACTGGAAACCCGCGCG GGGCGGCTGA
Upstream 100 bases:
>100_bases GCGGCTACAACCTGTCGGCGCTCGGACGCAGCGTCGTCGCGCACGTAAGGGCGCTCGCGGATATCTGAGCGCGAGGGCGT GCATCGCAGGAGGCGGCATC
Downstream 100 bases:
>100_bases ACGCGTCCATCAGCCTCGCTCCGAACGCGCCACTATCCACGCGACGAGTGCGTCGATCACGCGTTCGCGGTCGAGGTCGT TCATCGTCTCGTGATAACTG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MNAEATGALIERTRDAYDLGGVVRLTLNRPDAFNALSEALLDELQMHLADIAKSDARVVVIAGAGRAFCAGHDLREMRAA PSLDYYQSLFARCTKMMLAIQRLPQPVIARVHGIATAAGCQLVAMCDLAVAADTARFAVSGVNLGLFCATPSVPLSRNLS RKAALDMLLTGDFIDAMAAKQQGLVNRVVPMDALDNEVAALAKSICAKPREAIEAGKGLFYRQLEMGIEAAYQLAGQTMA CNMMDESALEGVQAFIDKRPPDWKPARGG
Sequences:
>Translated_269_residues MNAEATGALIERTRDAYDLGGVVRLTLNRPDAFNALSEALLDELQMHLADIAKSDARVVVIAGAGRAFCAGHDLREMRAA PSLDYYQSLFARCTKMMLAIQRLPQPVIARVHGIATAAGCQLVAMCDLAVAADTARFAVSGVNLGLFCATPSVPLSRNLS RKAALDMLLTGDFIDAMAAKQQGLVNRVVPMDALDNEVAALAKSICAKPREAIEAGKGLFYRQLEMGIEAAYQLAGQTMA CNMMDESALEGVQAFIDKRPPDWKPARGG >Mature_269_residues MNAEATGALIERTRDAYDLGGVVRLTLNRPDAFNALSEALLDELQMHLADIAKSDARVVVIAGAGRAFCAGHDLREMRAA PSLDYYQSLFARCTKMMLAIQRLPQPVIARVHGIATAAGCQLVAMCDLAVAADTARFAVSGVNLGLFCATPSVPLSRNLS RKAALDMLLTGDFIDAMAAKQQGLVNRVVPMDALDNEVAALAKSICAKPREAIEAGKGLFYRQLEMGIEAAYQLAGQTMA CNMMDESALEGVQAFIDKRPPDWKPARGG
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=43.4782608695652, Blast_Score=213, Evalue=1e-55, Organism=Homo sapiens, GI194097323, Length=258, Percent_Identity=31.3953488372093, Blast_Score=126, Evalue=2e-29, Organism=Homo sapiens, GI70995211, Length=253, Percent_Identity=29.6442687747036, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI260274832, Length=247, Percent_Identity=23.4817813765182, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI45643119, Length=247, Percent_Identity=23.4817813765182, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI260275230, Length=247, Percent_Identity=23.4817813765182, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4502327, Length=252, Percent_Identity=27.3809523809524, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI20127408, Length=196, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787659, Length=249, Percent_Identity=36.144578313253, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI221142681, Length=255, Percent_Identity=32.5490196078431, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788597, Length=263, Percent_Identity=30.7984790874525, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=27.3076923076923, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787660, Length=257, Percent_Identity=29.9610894941634, Blast_Score=85, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17540306, Length=252, Percent_Identity=41.6666666666667, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI25145438, Length=250, Percent_Identity=32, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17554946, Length=246, Percent_Identity=28.8617886178862, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560910, Length=252, Percent_Identity=28.968253968254, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17535521, Length=233, Percent_Identity=29.1845493562232, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17534483, Length=254, Percent_Identity=25.9842519685039, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17549921, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17540714, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922422, Length=246, Percent_Identity=37.8048780487805, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI20129971, Length=241, Percent_Identity=31.1203319502075, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24653477, Length=241, Percent_Identity=31.1203319502075, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI24653139, Length=269, Percent_Identity=28.6245353159851, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI19920382, Length=223, Percent_Identity=27.3542600896861, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357171, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24650670, Length=272, Percent_Identity=25.7352941176471, Blast_Score=71, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28771; Mature: 28771
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAEATGALIERTRDAYDLGGVVRLTLNRPDAFNALSEALLDELQMHLADIAKSDARVVV CCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IAGAGRAFCAGHDLREMRAAPSLDYYQSLFARCTKMMLAIQRLPQPVIARVHGIATAAGC EECCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QLVAMCDLAVAADTARFAVSGVNLGLFCATPSVPLSRNLSRKAALDMLLTGDFIDAMAAK HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQGLVNRVVPMDALDNEVAALAKSICAKPREAIEAGKGLFYRQLEMGIEAAYQLAGQTMA HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHE CNMMDESALEGVQAFIDKRPPDWKPARGG EHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNAEATGALIERTRDAYDLGGVVRLTLNRPDAFNALSEALLDELQMHLADIAKSDARVVV CCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE IAGAGRAFCAGHDLREMRAAPSLDYYQSLFARCTKMMLAIQRLPQPVIARVHGIATAAGC EECCCCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QLVAMCDLAVAADTARFAVSGVNLGLFCATPSVPLSRNLSRKAALDMLLTGDFIDAMAAK HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQGLVNRVVPMDALDNEVAALAKSICAKPREAIEAGKGLFYRQLEMGIEAAYQLAGQTMA HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHE CNMMDESALEGVQAFIDKRPPDWKPARGG EHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA