| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hldE [H]
Identifier: 186475516
GI number: 186475516
Start: 847658
End: 848620
Strand: Direct
Name: hldE [H]
Synonym: Bphy_0751
Alternate gene names: 186475516
Gene position: 847658-848620 (Clockwise)
Preceding gene: 186475515
Following gene: 186475517
Centisome position: 24.36
GC content: 68.33
Gene sequence:
>963_bases GTGCCTGAAGGCGCGACGCTCGCGCCCGAGGTGGGCGTCATCGCGCGCGAGCGGCTTGCTGCCGCCCGCGTGCTGGTGGT TGGGGACGTGATGCTCGATCGCTACTGGTTCGGCGATGTGAACCGGATATCGCCGGAAGCGCCCGTTCCCGTTGTGCTCG TGCAGCGCCAGGAAGACCGGCTGGGCGGCGCGGCGAACGTCGCGCGCAACGCGGCGGCGCTCGGTGCGCAGGCCGGCTTG CTGTGTGTAGTCGGCCACGACGAGCCCGGCGAGCGCGTCGTCCAACTGCTCGGCGATAGTGGCGTCGCGTCCCATCTCGA GCGTGATCCCGAACTGCCGACGACCATCAAGCTACGCGTGTTGTCGCGTCAGCAGCAGCTGCTGCGCGTCGATTTCGAGA AGGCGCCCGCGCACGAGGCGCTGCTCGCAGGCCTCGCGCGCTATGACGCGCTGCTGCCCGCTCACGACGTAATCCTGATG TCGGACTATGCGAAGGGTGGCCTCACGCACGTCACGCAGATGATCGCGAAGGCGCGTGCGGCGGGCAAGCCGGTGCTGGT CGATCCGAAGGGCGACGACTGGGAGCGCTACCGCGGCGCCACGCTGATCACGCCAAACCGCGCGGAGCTGCGCGAGGTGA TCGGGCATTGGAAGTCCGAGGCCGATCTGCTCGCGCGCGTGACCAGGCTGCGCGCCGAACTCGATCTGACAGCGCTGCTG CTCACGCGCTCGGAAGAAGGCATGACGTTGTTCTCGGACGAGGGCGTCCTGCACGCGGCTGCCGTAGCGCGTGAAGTGTA TGATGTGTCCGGCGCGGGCGATACCGTGATCGCGACGCTCGCCGTCATGCTCGGCGCGGGCCTGCCGCTGGACGAAGCCG TGTCGCTTGCGAATCGCGCCGCAGGCATTGTGGTCGCCAAGCTCGGCACGGCCACTGTCGACTACGACGAACTCTTTCAC TGA
Upstream 100 bases:
>100_bases AATCTGTATGAACCCGAGGCGATGTCGGAGCTCGGGATTGACTATCACTCGATTGGACGTCCCTATGCAAGACCCGCTGA AACTTCATCCGACTCCGGCC
Downstream 100 bases:
>100_bases TGCCCGCGCGCGCCCGTTTCATCGCGTGGCGCGCGGCGGTTCATCTGCGCATCCGTTGACTCACATCACTGCAGGACGAC CATGACCCTCATCGTCACCG
Product: rfaE bifunctional protein
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MPEGATLAPEVGVIARERLAAARVLVVGDVMLDRYWFGDVNRISPEAPVPVVLVQRQEDRLGGAANVARNAAALGAQAGL LCVVGHDEPGERVVQLLGDSGVASHLERDPELPTTIKLRVLSRQQQLLRVDFEKAPAHEALLAGLARYDALLPAHDVILM SDYAKGGLTHVTQMIAKARAAGKPVLVDPKGDDWERYRGATLITPNRAELREVIGHWKSEADLLARVTRLRAELDLTALL LTRSEEGMTLFSDEGVLHAAAVAREVYDVSGAGDTVIATLAVMLGAGLPLDEAVSLANRAAGIVVAKLGTATVDYDELFH
Sequences:
>Translated_320_residues MPEGATLAPEVGVIARERLAAARVLVVGDVMLDRYWFGDVNRISPEAPVPVVLVQRQEDRLGGAANVARNAAALGAQAGL LCVVGHDEPGERVVQLLGDSGVASHLERDPELPTTIKLRVLSRQQQLLRVDFEKAPAHEALLAGLARYDALLPAHDVILM SDYAKGGLTHVTQMIAKARAAGKPVLVDPKGDDWERYRGATLITPNRAELREVIGHWKSEADLLARVTRLRAELDLTALL LTRSEEGMTLFSDEGVLHAAAVAREVYDVSGAGDTVIATLAVMLGAGLPLDEAVSLANRAAGIVVAKLGTATVDYDELFH >Mature_319_residues PEGATLAPEVGVIARERLAAARVLVVGDVMLDRYWFGDVNRISPEAPVPVVLVQRQEDRLGGAANVARNAAALGAQAGLL CVVGHDEPGERVVQLLGDSGVASHLERDPELPTTIKLRVLSRQQQLLRVDFEKAPAHEALLAGLARYDALLPAHDVILMS DYAKGGLTHVTQMIAKARAAGKPVLVDPKGDDWERYRGATLITPNRAELREVIGHWKSEADLLARVTRLRAELDLTALLL TRSEEGMTLFSDEGVLHAAAVAREVYDVSGAGDTVIATLAVMLGAGLPLDEAVSLANRAAGIVVAKLGTATVDYDELFH
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=305, Percent_Identity=52.7868852459016, Blast_Score=285, Evalue=3e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 34197; Mature: 34065
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGATLAPEVGVIARERLAAARVLVVGDVMLDRYWFGDVNRISPEAPVPVVLVQRQEDR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH LGGAANVARNAAALGAQAGLLCVVGHDEPGERVVQLLGDSGVASHLERDPELPTTIKLRV CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEHHH LSRQQQLLRVDFEKAPAHEALLAGLARYDALLPAHDVILMSDYAKGGLTHVTQMIAKARA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH AGKPVLVDPKGDDWERYRGATLITPNRAELREVIGHWKSEADLLARVTRLRAELDLTALL CCCCEEECCCCCCHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE LTRSEEGMTLFSDEGVLHAAAVAREVYDVSGAGDTVIATLAVMLGAGLPLDEAVSLANRA EECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH AGIVVAKLGTATVDYDELFH CCEEEEECCCCEECHHHHCC >Mature Secondary Structure PEGATLAPEVGVIARERLAAARVLVVGDVMLDRYWFGDVNRISPEAPVPVVLVQRQEDR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHH LGGAANVARNAAALGAQAGLLCVVGHDEPGERVVQLLGDSGVASHLERDPELPTTIKLRV CCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHCCCCCCCEEEHHH LSRQQQLLRVDFEKAPAHEALLAGLARYDALLPAHDVILMSDYAKGGLTHVTQMIAKARA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH AGKPVLVDPKGDDWERYRGATLITPNRAELREVIGHWKSEADLLARVTRLRAELDLTALL CCCCEEECCCCCCHHHHCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEE LTRSEEGMTLFSDEGVLHAAAVAREVYDVSGAGDTVIATLAVMLGAGLPLDEAVSLANRA EECCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH AGIVVAKLGTATVDYDELFH CCEEEEECCCCEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA