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The map label for this gene is yciM [H]

Identifier: 186475514

GI number: 186475514

Start: 844987

End: 846162

Strand: Direct

Name: yciM [H]

Synonym: Bphy_0749

Alternate gene names: 186475514

Gene position: 844987-846162 (Clockwise)

Preceding gene: 186475513

Following gene: 186475515

Centisome position: 24.29

GC content: 63.44

Gene sequence:

>1176_bases
ATGGATCTAGACCTCTGGTGGCTGCTCGTCATACCCGTCGCATTCGCGTTCGGCTGGGTGGCTGCGCGCTACGACCTGAA
GGCGCTGCTTTCCGAAAGCGCCAACCTGCCGCGCTCTTATTTCCGCGGCCTGAACTTTCTGTTAAACGAGCAACCGGACC
AGGCTATCGACGCCTTCATCGAAGTCGTCAAGCTCGATCCCGAAACGATCGAGCTGCACTTCGCGCTCGGCAATCTGTTT
CGGCGCCGCGGCGAAACGGATCGGGCGATCCGCGTGCACCAGAACCTGCTAAGTCGCGCCGACTTACCCGTTACCGAGCG
CGATCACGCGTTGTTCGAACTGGGACAGGACTTCCTGAAGGCTGGCCTTCTGGACCGCGCGGAAGAGACGTTCAATGCGC
TCGAATCGGGCGATTACGCGCTTGGCGCCCAGCGGGCGCTGCTTACCATCTACCAGATCGAGAAGGACTGGAACAAATCG
ATCGATACCGCTCGCCGGCTCGAGACGATGGGCGCGGCGTCGCTCGACAAGGAAATCGGCCACTTTCATTGCGAGCTGGC
GCAGGAGGCGCTACAGCAGAAGAAGTCGGACGAGTCCCGTCGCCAGCTGGAGCTGGCGCTGAAGGCACATCCGCAGAACG
TGCGCGCGACGATCCTGTTCGGCGATGTCGATGCCGCGGCCGGCCAGTACGAGGCGGCAATCGCGCAATGGCTGCGTGTC
GAGGAACAGAACCCGGCGTATCTGCCCCTCGTCGCCGAAAAGCTGACGAAGGCGTACGAGGCGCTGGGTCGTGCGGAAGA
GGGCGCCGACCTGCTGACGACATGGGTGGACCGTTATCCGTCGAACGATCTGCTCGACGTCGCGTATCAGCACGTGTCGG
CGCTGCGGGGTCCTGAAGCGGCCCACGCGCTCGCGCGCACGCAGATGCAAAAGTCCCCGAATCTCGCGGGCATGACGCGT
CTGCTCGAAGCGCAGCAGGCGGTGGCCGAGGAGCCGCGCCGCAGCGAACTGGAACTGATGCGCACGTTGATCCGTCAGCG
CACCAAGAACCTGCCGCGTTACACGTGCCAGAATTGCGGCTTCCGGGCGCGACTTTTCTATTGGCAGTGTCCGGGATGCA
GCGGCTGGGAAACCTATGCGCCACGCCGCGTCGAGCCCATCACGGCGTCGAGTTGA

Upstream 100 bases:

>100_bases
CGCCCGCGGCCGTCGAAGAGCCGCCGATGCCACCGCTCATCTAGCCCTCTAACGCCGTGCGCCGCCGGCGCACGGTCTCT
TTCGTCCTCCGTACATTCGC

Downstream 100 bases:

>100_bases
CGCGAGGCGCGCGCAGGAGCGTGTTTTGCAACGTAGTCGCGCCGCATCGAAGCGTGGAACTTTGAACCCGCATCAATTAC
TGGGAAGCGTATGAAAATCA

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDLDLWWLLVIPVAFAFGWVAARYDLKALLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVVKLDPETIELHFALGNLF
RRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLKAGLLDRAEETFNALESGDYALGAQRALLTIYQIEKDWNKS
IDTARRLETMGAASLDKEIGHFHCELAQEALQQKKSDESRRQLELALKAHPQNVRATILFGDVDAAAGQYEAAIAQWLRV
EEQNPAYLPLVAEKLTKAYEALGRAEEGADLLTTWVDRYPSNDLLDVAYQHVSALRGPEAAHALARTQMQKSPNLAGMTR
LLEAQQAVAEEPRRSELELMRTLIRQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPITASS

Sequences:

>Translated_391_residues
MDLDLWWLLVIPVAFAFGWVAARYDLKALLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVVKLDPETIELHFALGNLF
RRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLKAGLLDRAEETFNALESGDYALGAQRALLTIYQIEKDWNKS
IDTARRLETMGAASLDKEIGHFHCELAQEALQQKKSDESRRQLELALKAHPQNVRATILFGDVDAAAGQYEAAIAQWLRV
EEQNPAYLPLVAEKLTKAYEALGRAEEGADLLTTWVDRYPSNDLLDVAYQHVSALRGPEAAHALARTQMQKSPNLAGMTR
LLEAQQAVAEEPRRSELELMRTLIRQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPITASS
>Mature_391_residues
MDLDLWWLLVIPVAFAFGWVAARYDLKALLSESANLPRSYFRGLNFLLNEQPDQAIDAFIEVVKLDPETIELHFALGNLF
RRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLKAGLLDRAEETFNALESGDYALGAQRALLTIYQIEKDWNKS
IDTARRLETMGAASLDKEIGHFHCELAQEALQQKKSDESRRQLELALKAHPQNVRATILFGDVDAAAGQYEAAIAQWLRV
EEQNPAYLPLVAEKLTKAYEALGRAEEGADLLTTWVDRYPSNDLLDVAYQHVSALRGPEAAHALARTQMQKSPNLAGMTR
LLEAQQAVAEEPRRSELELMRTLIRQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPITASS

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=378, Percent_Identity=39.1534391534392, Blast_Score=261, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44355; Mature: 44355

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDLWWLLVIPVAFAFGWVAARYDLKALLSESANLPRSYFRGLNFLLNEQPDQAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVVKLDPETIELHFALGNLFRRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLK
HHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEETFNALESGDYALGAQRALLTIYQIEKDWNKSIDTARRLETMGAASLDKEIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFHCELAQEALQQKKSDESRRQLELALKAHPQNVRATILFGDVDAAAGQYEAAIAQWLRV
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EEQNPAYLPLVAEKLTKAYEALGRAEEGADLLTTWVDRYPSNDLLDVAYQHVSALRGPEA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AHALARTQMQKSPNLAGMTRLLEAQQAVAEEPRRSELELMRTLIRQRTKNLPRYTCQNCG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
FRARLFYWQCPGCSGWETYAPRRVEPITASS
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLDLWWLLVIPVAFAFGWVAARYDLKALLSESANLPRSYFRGLNFLLNEQPDQAIDAFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVVKLDPETIELHFALGNLFRRRGETDRAIRVHQNLLSRADLPVTERDHALFELGQDFLK
HHHHCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEETFNALESGDYALGAQRALLTIYQIEKDWNKSIDTARRLETMGAASLDKEIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFHCELAQEALQQKKSDESRRQLELALKAHPQNVRATILFGDVDAAAGQYEAAIAQWLRV
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EEQNPAYLPLVAEKLTKAYEALGRAEEGADLLTTWVDRYPSNDLLDVAYQHVSALRGPEA
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AHALARTQMQKSPNLAGMTRLLEAQQAVAEEPRRSELELMRTLIRQRTKNLPRYTCQNCG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCC
FRARLFYWQCPGCSGWETYAPRRVEPITASS
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]