| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475504
Identifier: 186475504
GI number: 186475504
Start: 834752
End: 835360
Strand: Direct
Name: 186475504
Synonym: Bphy_0739
Alternate gene names: NA
Gene position: 834752-835360 (Clockwise)
Preceding gene: 186475503
Following gene: 186475505
Centisome position: 23.99
GC content: 59.93
Gene sequence:
>609_bases ATGCAAAATCGTTTCAAGCAGTTGATGGTTCTGGCCGCTTTCGTGCCGACGCTTGCGATGGCGCAAGCGCTGCAAAACCA GCAGCCGGCCCCGGCTGCTCCGGCCGCTGCTGCTGCGCCTGTTGATCCGGCGAAGCAGGCTGCCATCAAAGATCTGCTGA ACGCGATCGACGCGCAGAAGCTGGTCGGCGCCATTGGCAATAGCGCGCAAATGCAGGCCAAGCAGTTGGTTCCGGCCATC CTGTCGGACGCGCTGTCCGAAAACAAGACGATGACGGACAAGCAAAAGCAGGCTTCTGTCCCGACGCTGCAGAAGAACGC GGTGCCGAAGCTGGTTGACTCGGCAGGCCAGGTCTTCGCAACGGACGCATTCAAGCAGGACGCCATGCAAGCTCAGTACG ACGCGTACGCCAAGTACTACAGCACGCAGGAAATCAAGGACCTGACCGCGTTCTACAACAGCCCCACGGGCCGCAAGTTC ATCCAGGTGCAAGACCAGGTTGGCCGCGACGTCGTGAACGGTCTGATGCAGAAGTACATGCCGCAATCGATCAAGGCAAC GCGCGACCAGGCTGACAAGGAAGTCGCTTCCGTCAAGCCGGCGAAGTAA
Upstream 100 bases:
>100_bases TCAAGTAATGCGGAAAGCCGCGCGGGCATTCCGCGCGCATCGGGACTGATGCGCCGCTTGCGCGGTGAAGCACCCAGATT AATTTCTCTTAGGAGTAGAG
Downstream 100 bases:
>100_bases GCAGGTCGAACAAGGCTGAACGGCGCTCGAGACATCCGCCGCGGGCGGTCTAAGAGGGAATGCGGGAAACCCCTTGAAAC GCCGAGGTTTGGCGGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MQNRFKQLMVLAAFVPTLAMAQALQNQQPAPAAPAAAAAPVDPAKQAAIKDLLNAIDAQKLVGAIGNSAQMQAKQLVPAI LSDALSENKTMTDKQKQASVPTLQKNAVPKLVDSAGQVFATDAFKQDAMQAQYDAYAKYYSTQEIKDLTAFYNSPTGRKF IQVQDQVGRDVVNGLMQKYMPQSIKATRDQADKEVASVKPAK
Sequences:
>Translated_202_residues MQNRFKQLMVLAAFVPTLAMAQALQNQQPAPAAPAAAAAPVDPAKQAAIKDLLNAIDAQKLVGAIGNSAQMQAKQLVPAI LSDALSENKTMTDKQKQASVPTLQKNAVPKLVDSAGQVFATDAFKQDAMQAQYDAYAKYYSTQEIKDLTAFYNSPTGRKF IQVQDQVGRDVVNGLMQKYMPQSIKATRDQADKEVASVKPAK >Mature_202_residues MQNRFKQLMVLAAFVPTLAMAQALQNQQPAPAAPAAAAAPVDPAKQAAIKDLLNAIDAQKLVGAIGNSAQMQAKQLVPAI LSDALSENKTMTDKQKQASVPTLQKNAVPKLVDSAGQVFATDAFKQDAMQAQYDAYAKYYSTQEIKDLTAFYNSPTGRKF IQVQDQVGRDVVNGLMQKYMPQSIKATRDQADKEVASVKPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21799; Mature: 21799
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRFKQLMVLAAFVPTLAMAQALQNQQPAPAAPAAAAAPVDPAKQAAIKDLLNAIDAQK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LVGAIGNSAQMQAKQLVPAILSDALSENKTMTDKQKQASVPTLQKNAVPKLVDSAGQVFA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHH TDAFKQDAMQAQYDAYAKYYSTQEIKDLTAFYNSPTGRKFIQVQDQVGRDVVNGLMQKYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC PQSIKATRDQADKEVASVKPAK CHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQNRFKQLMVLAAFVPTLAMAQALQNQQPAPAAPAAAAAPVDPAKQAAIKDLLNAIDAQK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH LVGAIGNSAQMQAKQLVPAILSDALSENKTMTDKQKQASVPTLQKNAVPKLVDSAGQVFA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCHHH TDAFKQDAMQAQYDAYAKYYSTQEIKDLTAFYNSPTGRKFIQVQDQVGRDVVNGLMQKYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC PQSIKATRDQADKEVASVKPAK CHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA