| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475484
Identifier: 186475484
GI number: 186475484
Start: 810381
End: 811460
Strand: Reverse
Name: 186475484
Synonym: Bphy_0719
Alternate gene names: NA
Gene position: 811460-810381 (Counterclockwise)
Preceding gene: 186475485
Following gene: 186475480
Centisome position: 23.32
GC content: 67.13
Gene sequence:
>1080_bases GTGTCGACACCCCCACTCACACTCGTTGCCGGCGAACTGGCCATGCCGCGTCTTCGTCAGCTCGATCTGGTCTCACGCTC CGTCGGTCGCGAATGGTCGCTGCTGCCGCCTGGCGCGAACTTTCGTACGGAGCTCCGGGCGCTGTATGCGGCGATGATGC GAACCTTCTGCATGAGCGCCGCCTTCATTCGCGCGAAGTCTCGCTGGGACACACATGCCGCGCAGCCCCAACCGGCCGCC ACCGCTCCCTGCGCGCCCGTTTTCAAGGCCGACACCATTTCTCTCGGCATGCGCGAACCCGTGCTCGTATCGGCTCGCAA GGGCAGACCGACGAACGCGCTGGCGGGCGGCGCGTTCGTCATCGGCGGCGCGGCTTTGATTGCGTGGCTGATGGCGAATC ATCCGCGACATGCGTCGTCGCCGGACCTCGCCGCAGCGCCCGAAGTGACGCGCAACATCCTGTCGCGGCAAGACGGCCAC GCGGCGGCGCGCGCCGGACAGGCGCACAGCCGGTCCGTTGGCGTCGAACGTTTCGTCGATGCGCCGCTCGCGTGGAACCG CGCGCGTGGCGATCTGCTCGCACGCAACGCAGAGCCTACGCCGGTTACTTCCCATGCAATCGATGCACACCCCCGCGTCC CGTCAACGCGCACGAAGCAGCCGGCTACCGGCCATCCCGTGCACGCTAGGCGCGATGGTCGCGACGCGCGCAAGACAAAT GCGGAGAAGCGCGAGCGCGACACGGTTGCGAAGGCGGACGTGCGCCATGCGTGGCGTGCGACGCCCCCTCTGACCGACAT CGCGCCGCATCAAAGTCTGCGCCTGCCAGCCGGTTCGCAGATGGCGTCAGGCCAGCCTCCACGCCATCTGCCGTCGATCG CGGGCGCATATTCGCCTGCTGCGCCGTCGGCGCGCTTTGACAGCGACTATGGTTCCGTTGCGATGTCGGCGGGCACGCAT GTCAGCGATATCCCGCCCGCGCCAATCCACCACGACCGTGTCGACACGGACAGCACCGACTGGATGAACCACATGTCGCA TCGGCGCATCACTGACGCGCCTGACAGTTTTTCGAAGTAA
Upstream 100 bases:
>100_bases GAAGGCCTCGACTGAAGCCATGAGCATGCAGCCGGTTTTTGTCTGCTGATGTTTTGCCGCTCCGAGGCCAAAAAACACCA ACAACATCGAGGCGAGGACC
Downstream 100 bases:
>100_bases GCCGCGAGCCGCGACATTTCCGCTGCAAGCAGTGCGCCTGCCTGAAGGCACAAAGGGCTGAGTCCACGAATCGCGGACTC AGCCCTATTCTTTGCGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSTPPLTLVAGELAMPRLRQLDLVSRSVGREWSLLPPGANFRTELRALYAAMMRTFCMSAAFIRAKSRWDTHAAQPQPAA TAPCAPVFKADTISLGMREPVLVSARKGRPTNALAGGAFVIGGAALIAWLMANHPRHASSPDLAAAPEVTRNILSRQDGH AAARAGQAHSRSVGVERFVDAPLAWNRARGDLLARNAEPTPVTSHAIDAHPRVPSTRTKQPATGHPVHARRDGRDARKTN AEKRERDTVAKADVRHAWRATPPLTDIAPHQSLRLPAGSQMASGQPPRHLPSIAGAYSPAAPSARFDSDYGSVAMSAGTH VSDIPPAPIHHDRVDTDSTDWMNHMSHRRITDAPDSFSK
Sequences:
>Translated_359_residues MSTPPLTLVAGELAMPRLRQLDLVSRSVGREWSLLPPGANFRTELRALYAAMMRTFCMSAAFIRAKSRWDTHAAQPQPAA TAPCAPVFKADTISLGMREPVLVSARKGRPTNALAGGAFVIGGAALIAWLMANHPRHASSPDLAAAPEVTRNILSRQDGH AAARAGQAHSRSVGVERFVDAPLAWNRARGDLLARNAEPTPVTSHAIDAHPRVPSTRTKQPATGHPVHARRDGRDARKTN AEKRERDTVAKADVRHAWRATPPLTDIAPHQSLRLPAGSQMASGQPPRHLPSIAGAYSPAAPSARFDSDYGSVAMSAGTH VSDIPPAPIHHDRVDTDSTDWMNHMSHRRITDAPDSFSK >Mature_358_residues STPPLTLVAGELAMPRLRQLDLVSRSVGREWSLLPPGANFRTELRALYAAMMRTFCMSAAFIRAKSRWDTHAAQPQPAAT APCAPVFKADTISLGMREPVLVSARKGRPTNALAGGAFVIGGAALIAWLMANHPRHASSPDLAAAPEVTRNILSRQDGHA AARAGQAHSRSVGVERFVDAPLAWNRARGDLLARNAEPTPVTSHAIDAHPRVPSTRTKQPATGHPVHARRDGRDARKTNA EKRERDTVAKADVRHAWRATPPLTDIAPHQSLRLPAGSQMASGQPPRHLPSIAGAYSPAAPSARFDSDYGSVAMSAGTHV SDIPPAPIHHDRVDTDSTDWMNHMSHRRITDAPDSFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38649; Mature: 38518
Theoretical pI: Translated: 11.29; Mature: 11.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTPPLTLVAGELAMPRLRQLDLVSRSVGREWSLLPPGANFRTELRALYAAMMRTFCMSA CCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFIRAKSRWDTHAAQPQPAATAPCAPVFKADTISLGMREPVLVSARKGRPTNALAGGAFV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHH IGGAALIAWLMANHPRHASSPDLAAAPEVTRNILSRQDGHAAARAGQAHSRSVGVERFVD HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHCHHHHHC APLAWNRARGDLLARNAEPTPVTSHAIDAHPRVPSTRTKQPATGHPVHARRDGRDARKTN CCCCCCHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AEKRERDTVAKADVRHAWRATPPLTDIAPHQSLRLPAGSQMASGQPPRHLPSIAGAYSPA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC APSARFDSDYGSVAMSAGTHVSDIPPAPIHHDRVDTDSTDWMNHMSHRRITDAPDSFSK CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure STPPLTLVAGELAMPRLRQLDLVSRSVGREWSLLPPGANFRTELRALYAAMMRTFCMSA CCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AFIRAKSRWDTHAAQPQPAATAPCAPVFKADTISLGMREPVLVSARKGRPTNALAGGAFV HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCHHH IGGAALIAWLMANHPRHASSPDLAAAPEVTRNILSRQDGHAAARAGQAHSRSVGVERFVD HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHCCCHHHHHHCHHHHHC APLAWNRARGDLLARNAEPTPVTSHAIDAHPRVPSTRTKQPATGHPVHARRDGRDARKTN CCCCCCHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC AEKRERDTVAKADVRHAWRATPPLTDIAPHQSLRLPAGSQMASGQPPRHLPSIAGAYSPA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC APSARFDSDYGSVAMSAGTHVSDIPPAPIHHDRVDTDSTDWMNHMSHRRITDAPDSFSK CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA