Click here to switch to the map view.

The map label for this gene is dsbB [H]

Identifier: 186475479

GI number: 186475479

Start: 803652

End: 804158

Strand: Reverse

Name: dsbB [H]

Synonym: Bphy_0714

Alternate gene names: 186475479

Gene position: 804158-803652 (Counterclockwise)

Preceding gene: 186475480

Following gene: 186475478

Centisome position: 23.11

GC content: 61.54

Gene sequence:

>507_bases
ATGAATATCGATAACGTTAAATTGCGCCGTGAGCGCAGTCTGCTCGTTCTACTGGGACTCGTCTGTCTCGCGCTCGTCGG
TGGCGCGTTGTATCTGCAGTTCGTCGAGCACGAAGATCCGTGCCCGTTGTGCATCATCCAGCGCTATTTCTATCTGCTGA
TTGCGATCTTCGCGTTTCTCGGCGCGCGCATGCGCGGCTGGACGGGCGTGCGGCTGCTTGAAGTGCTGGCGCTGCTGTCG
GCGCTCGGCGGCCTGCTGACGGCGGCGCGGCACGTGTATGTGCAGTCGCATCCGAATTTCAGCTGCGGCTTCGATGCCTT
GCAGCCGATCGTCGACGGCCTGCCGCCCGCGCACTGGCTGCCCAGCGTGTTCAAGGTCGCCGGTTTGTGCGAAACGCCTT
ATCCGCCGATTCTCGGCATTTCGCTGCCGGGCTGGTCACTGATCGGCTTCGCGGTGATTTTTGTCGCGCTGACGGGCAGC
ATTTGGCGTAACCGTCGGCTTCGATAA

Upstream 100 bases:

>100_bases
GCCGCGGATCGCGCACGGCCGTGCCTGGGCGGCGGCATGCGCCGCGGGCTTCGGCTAGAATCGCCGCACCCTTTACCGAA
CTTCCACCGCCAGCAGGATC

Downstream 100 bases:

>100_bases
GTTCCGGCTTCCCCGCGCCGGGTTCGGCAGTCTTGCCGCCCGCGCGCAACGCAGCCCCCCTCTTCCTCCCGGATGACGCT
TTCCCCAGCGTCCTTTCCCC

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase [H]

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MNIDNVKLRRERSLLVLLGLVCLALVGGALYLQFVEHEDPCPLCIIQRYFYLLIAIFAFLGARMRGWTGVRLLEVLALLS
ALGGLLTAARHVYVQSHPNFSCGFDALQPIVDGLPPAHWLPSVFKVAGLCETPYPPILGISLPGWSLIGFAVIFVALTGS
IWRNRRLR

Sequences:

>Translated_168_residues
MNIDNVKLRRERSLLVLLGLVCLALVGGALYLQFVEHEDPCPLCIIQRYFYLLIAIFAFLGARMRGWTGVRLLEVLALLS
ALGGLLTAARHVYVQSHPNFSCGFDALQPIVDGLPPAHWLPSVFKVAGLCETPYPPILGISLPGWSLIGFAVIFVALTGS
IWRNRRLR
>Mature_168_residues
MNIDNVKLRRERSLLVLLGLVCLALVGGALYLQFVEHEDPCPLCIIQRYFYLLIAIFAFLGARMRGWTGVRLLEVLALLS
ALGGLLTAARHVYVQSHPNFSCGFDALQPIVDGLPPAHWLPSVFKVAGLCETPYPPILGISLPGWSLIGFAVIFVALTGS
IWRNRRLR

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein [H]

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003752
- InterPro:   IPR022920 [H]

Pfam domain/function: PF02600 DsbB [H]

EC number: NA

Molecular weight: Translated: 18596; Mature: 18596

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDNVKLRRERSLLVLLGLVCLALVGGALYLQFVEHEDPCPLCIIQRYFYLLIAIFAFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GARMRGWTGVRLLEVLALLSALGGLLTAARHVYVQSHPNFSCGFDALQPIVDGLPPAHWL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHH
PSVFKVAGLCETPYPPILGISLPGWSLIGFAVIFVALTGSIWRNRRLR
HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIDNVKLRRERSLLVLLGLVCLALVGGALYLQFVEHEDPCPLCIIQRYFYLLIAIFAFL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
GARMRGWTGVRLLEVLALLSALGGLLTAARHVYVQSHPNFSCGFDALQPIVDGLPPAHWL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHH
PSVFKVAGLCETPYPPILGISLPGWSLIGFAVIFVALTGSIWRNRRLR
HHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA