| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is add [H]
Identifier: 186475475
GI number: 186475475
Start: 796999
End: 798039
Strand: Reverse
Name: add [H]
Synonym: Bphy_0710
Alternate gene names: 186475475
Gene position: 798039-796999 (Counterclockwise)
Preceding gene: 186475476
Following gene: 186475474
Centisome position: 22.94
GC content: 62.73
Gene sequence:
>1041_bases ATGACGACAACCACACTGTCCCCGCTAGCTCGCAAAACCAGCCTCGCACCGAAGGCCGAGTTGCACATTCATATCGAAGG TTCGCTGGAACCCGAGCTGATCTTCAAGCTTGCCGAACGCAACGGCGTGAAACTCGCGTACGAATCGATCGATGCGCTGC GTGCCGCGTATGCGTTCACCGATCTGCAGTCGTTCCTCGACATCTACTACGCGGGCGCCAGCGTGCTGCTGAAGGAAGAG GACTTCTACGACATGACGATGGCTTACGTCGAGCGCGCGCTCGCGGACAACGTCGTGCATACGGAAATCTTCTTCGATCC GCAGACGCATACGGAGCGCGGCGTGCCGATTGCGACCGTGGTCGCGGGCATCGAGCGCGCACTTGCCGAAGCGCAAACGC GCGGTCTCACGAGCAAACTGATCTTGTGTTTCCTGCGGCATCTGTCCGAAGACGATGCACTCGCGACGTTCGACGCGGCG CTGCCGCTGTTCGATCAGTACAGGCACCGGCTGATCGGTGTCGGGCTCGATTCGTCGGAGCACGGCCATCCGCCGTCCAA GTTCGAGCGCGTGTTCGCGAAGGCACGCGCCAAAGGTCTGAAGCTCGTCGCACATGCCGGCGAAGAAGGCCCGCCGTCGT ACATCTACGAAGCGCTCGATCTGCTGAAGGTCGACCGCGTCGACCACGGCGTGCGCAGCATCGAAGACCCGGCGCTCGTC ACGCGCCTTGCCGATTCGCGTGTCGCTCTGACGGTCTGCCCGCTGTCGAACCTGAAGCTGTGCGTGTTCGACGATCTGAC GAGGCATACGCTGAAGGCGCTGCTCGACGCGGGCGTCGCCGTCACCGTGAACTCCGACGACCCCGCGTACTTCGGCGGCT ACGTCAACGAAAACTACCTCGCGACGATCGACGCCCTCAAGCTCGACGACGCCGAGGTGTACACGATCATCCGCAACGGC TTCGAGGCGTCGTTCGTCACGCCCGCGCAGCGCGATGCGATGATCGCGAAACTCGATGCGCACTGGCGCGCATCTGCCTG A
Upstream 100 bases:
>100_bases CAAACCAGTATCGAGCATGTATTGCAATCACATTGGGGACGACCGACCCAGCCATCGGACGTCGAATCAATCCATCGATA ACCCGAATCACTGACCGACC
Downstream 100 bases:
>100_bases TTCTTACCCGTTCGGAGACGGTTTCACTCATGACTCAAACAGCTTTTCGCGCGCACCTGCTGACGTTCAACGGCGATCCT GCGCAATCGTCCAACGCTGC
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MTTTTLSPLARKTSLAPKAELHIHIEGSLEPELIFKLAERNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLKEE DFYDMTMAYVERALADNVVHTEIFFDPQTHTERGVPIATVVAGIERALAEAQTRGLTSKLILCFLRHLSEDDALATFDAA LPLFDQYRHRLIGVGLDSSEHGHPPSKFERVFAKARAKGLKLVAHAGEEGPPSYIYEALDLLKVDRVDHGVRSIEDPALV TRLADSRVALTVCPLSNLKLCVFDDLTRHTLKALLDAGVAVTVNSDDPAYFGGYVNENYLATIDALKLDDAEVYTIIRNG FEASFVTPAQRDAMIAKLDAHWRASA
Sequences:
>Translated_346_residues MTTTTLSPLARKTSLAPKAELHIHIEGSLEPELIFKLAERNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLKEE DFYDMTMAYVERALADNVVHTEIFFDPQTHTERGVPIATVVAGIERALAEAQTRGLTSKLILCFLRHLSEDDALATFDAA LPLFDQYRHRLIGVGLDSSEHGHPPSKFERVFAKARAKGLKLVAHAGEEGPPSYIYEALDLLKVDRVDHGVRSIEDPALV TRLADSRVALTVCPLSNLKLCVFDDLTRHTLKALLDAGVAVTVNSDDPAYFGGYVNENYLATIDALKLDDAEVYTIIRNG FEASFVTPAQRDAMIAKLDAHWRASA >Mature_345_residues TTTTLSPLARKTSLAPKAELHIHIEGSLEPELIFKLAERNGVKLAYESIDALRAAYAFTDLQSFLDIYYAGASVLLKEED FYDMTMAYVERALADNVVHTEIFFDPQTHTERGVPIATVVAGIERALAEAQTRGLTSKLILCFLRHLSEDDALATFDAAL PLFDQYRHRLIGVGLDSSEHGHPPSKFERVFAKARAKGLKLVAHAGEEGPPSYIYEALDLLKVDRVDHGVRSIEDPALVT RLADSRVALTVCPLSNLKLCVFDDLTRHTLKALLDAGVAVTVNSDDPAYFGGYVNENYLATIDALKLDDAEVYTIIRNGF EASFVTPAQRDAMIAKLDAHWRASA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=342, Percent_Identity=24.5614035087719, Blast_Score=103, Evalue=3e-22, Organism=Escherichia coli, GI1787910, Length=330, Percent_Identity=27.8787878787879, Blast_Score=131, Evalue=6e-32, Organism=Caenorhabditis elegans, GI32565969, Length=349, Percent_Identity=21.4899713467049, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17538512, Length=349, Percent_Identity=21.4899713467049, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324188, Length=331, Percent_Identity=41.9939577039275, Blast_Score=270, Evalue=2e-73, Organism=Drosophila melanogaster, GI24645260, Length=324, Percent_Identity=24.0740740740741, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 38136; Mature: 38005
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTLSPLARKTSLAPKAELHIHIEGSLEPELIFKLAERNGVKLAYESIDALRAAYAFT CCCCCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH DLQSFLDIYYAGASVLLKEEDFYDMTMAYVERALADNVVHTEIFFDPQTHTERGVPIATV HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH VAGIERALAEAQTRGLTSKLILCFLRHLSEDDALATFDAALPLFDQYRHRLIGVGLDSSE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCC HGHPPSKFERVFAKARAKGLKLVAHAGEEGPPSYIYEALDLLKVDRVDHGVRSIEDPALV CCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TRLADSRVALTVCPLSNLKLCVFDDLTRHTLKALLDAGVAVTVNSDDPAYFGGYVNENYL HHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEE ATIDALKLDDAEVYTIIRNGFEASFVTPAQRDAMIAKLDAHWRASA EEEEEEECCCHHHHHHHHCCCCCCCCCCCHHCHHEEEECCCCCCCC >Mature Secondary Structure TTTTLSPLARKTSLAPKAELHIHIEGSLEPELIFKLAERNGVKLAYESIDALRAAYAFT CCCCCCHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHH DLQSFLDIYYAGASVLLKEEDFYDMTMAYVERALADNVVHTEIFFDPQTHTERGVPIATV HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHH VAGIERALAEAQTRGLTSKLILCFLRHLSEDDALATFDAALPLFDQYRHRLIGVGLDSSE HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCC HGHPPSKFERVFAKARAKGLKLVAHAGEEGPPSYIYEALDLLKVDRVDHGVRSIEDPALV CCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH TRLADSRVALTVCPLSNLKLCVFDDLTRHTLKALLDAGVAVTVNSDDPAYFGGYVNENYL HHHCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCCEE ATIDALKLDDAEVYTIIRNGFEASFVTPAQRDAMIAKLDAHWRASA EEEEEEECCCHHHHHHHHCCCCCCCCCCCHHCHHEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA