| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is yqeB [C]
Identifier: 186475476
GI number: 186475476
Start: 798144
End: 799154
Strand: Reverse
Name: yqeB [C]
Synonym: Bphy_0711
Alternate gene names: 186475476
Gene position: 799154-798144 (Counterclockwise)
Preceding gene: 186475477
Following gene: 186475475
Centisome position: 22.97
GC content: 68.55
Gene sequence:
>1011_bases ATGCACGCCTGGCTCACCGATCTGCAACAACTGCTCGCTCACGGCGACGCCGTCGTGCTCGTGACGGTTGCCCGCGCCGA AGGTTCGGCGCCGCGCGACGCCGGCACGAAGATGATCGTCACGCGCGATTCTGCGCGCCATACGATCGGCGGCGGGCATC TCGAATGGAAAGCAATCGAAAGTGCGCGCCAGGTGCTGCGCGACGGCATGCGCGCGCCAAACATGCGGCGGCTCGAGCGG TTCGCGCTCGGACCGAGCCTCGGCCAGTGCTGCGGCGGCGCCGTGGTGCTCGCGTTCGAACGGCTCGACATCGCCGATCT GGGCTGGGTCACGTCGCTTGCGAAGCGCATTGCGGCGGGTCAATCGGTGGTGCGTAGCGTATCATTCGGGCCCGCACCCG ATGCCGTGATGCTGTCCGATCCTGAGCCGGGCGTCGAAAGCGCCGATTGCCTGCTGTGGGACGGCGCGGGTTTCGACGAC AGCAGCGCGCTGCTCACCGAAACCATCGCGCCGCGCGACTTCCCCGTCGTGCTGTTCGGTGCGGGACACGTGGGCGCTGC CCTCGTGCGCGTGCTCGCGACGCTGCCCTGCCATGTGCACTGGGTCGACGAACGCGATGCGCAGTTCCCGGATCCCGGCA CGCTGGGCGCCGCGAACGTGACGATCGACGCGAACGACGCGCCCGTCGAAGCCGTCGACAAGGCCGCGCCGCACACGTAC TTCATCGTGATGACGCACAACCACGCGCGCGACCTCGATCTCGCCGAACGCATCCTGCGGCGCGGCGACTTCGCGTTCTT CGGCATGATCGGCTCGCACACGAAGCGCAAGCAGTTCGAGCACCGACTCGCCGCGCGCGGCTTCGATCCCGTGGCGATCG CGCGGATGAAGTGCCCGCTCGGCGTGGACGGCATCGTCGACAAGTCGCCGGAGATCATTGCGATTTCCGCAGCGGCGCAA CTGCTGCAGGCCGTCGAGGCCAACACGGCGCACGCGGTGCAGACGGCGTGA
Upstream 100 bases:
>100_bases GGCATAGCACAACCCAGGTGCGGCGCGACACGACCGCGCCGCCCACACGATCAACCGGCTGCGCGGCCAATCCACGCGGC CTTGCACGGAGAACAGCCGG
Downstream 100 bases:
>100_bases GCATCAAACCAGTATCGAGCATGTATTGCAATCACATTGGGGACGACCGACCCAGCCATCGGACGTCGAATCAATCCATC GATAACCCGAATCACTGACC
Product: xanthine dehydrogenase accessory protein XdhC
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase; Xanthine Dehydrogenase Accessory Protein Xdhc; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MHAWLTDLQQLLAHGDAVVLVTVARAEGSAPRDAGTKMIVTRDSARHTIGGGHLEWKAIESARQVLRDGMRAPNMRRLER FALGPSLGQCCGGAVVLAFERLDIADLGWVTSLAKRIAAGQSVVRSVSFGPAPDAVMLSDPEPGVESADCLLWDGAGFDD SSALLTETIAPRDFPVVLFGAGHVGAALVRVLATLPCHVHWVDERDAQFPDPGTLGAANVTIDANDAPVEAVDKAAPHTY FIVMTHNHARDLDLAERILRRGDFAFFGMIGSHTKRKQFEHRLAARGFDPVAIARMKCPLGVDGIVDKSPEIIAISAAAQ LLQAVEANTAHAVQTA
Sequences:
>Translated_336_residues MHAWLTDLQQLLAHGDAVVLVTVARAEGSAPRDAGTKMIVTRDSARHTIGGGHLEWKAIESARQVLRDGMRAPNMRRLER FALGPSLGQCCGGAVVLAFERLDIADLGWVTSLAKRIAAGQSVVRSVSFGPAPDAVMLSDPEPGVESADCLLWDGAGFDD SSALLTETIAPRDFPVVLFGAGHVGAALVRVLATLPCHVHWVDERDAQFPDPGTLGAANVTIDANDAPVEAVDKAAPHTY FIVMTHNHARDLDLAERILRRGDFAFFGMIGSHTKRKQFEHRLAARGFDPVAIARMKCPLGVDGIVDKSPEIIAISAAAQ LLQAVEANTAHAVQTA >Mature_336_residues MHAWLTDLQQLLAHGDAVVLVTVARAEGSAPRDAGTKMIVTRDSARHTIGGGHLEWKAIESARQVLRDGMRAPNMRRLER FALGPSLGQCCGGAVVLAFERLDIADLGWVTSLAKRIAAGQSVVRSVSFGPAPDAVMLSDPEPGVESADCLLWDGAGFDD SSALLTETIAPRDFPVVLFGAGHVGAALVRVLATLPCHVHWVDERDAQFPDPGTLGAANVTIDANDAPVEAVDKAAPHTY FIVMTHNHARDLDLAERILRRGDFAFFGMIGSHTKRKQFEHRLAARGFDPVAIARMKCPLGVDGIVDKSPEIIAISAAAQ LLQAVEANTAHAVQTA
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35847; Mature: 35847
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAWLTDLQQLLAHGDAVVLVTVARAEGSAPRDAGTKMIVTRDSARHTIGGGHLEWKAIE CCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHH SARQVLRDGMRAPNMRRLERFALGPSLGQCCGGAVVLAFERLDIADLGWVTSLAKRIAAG HHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHH QSVVRSVSFGPAPDAVMLSDPEPGVESADCLLWDGAGFDDSSALLTETIAPRDFPVVLFG HHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEEEE AGHVGAALVRVLATLPCHVHWVDERDAQFPDPGTLGAANVTIDANDAPVEAVDKAAPHTY CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEE FIVMTHNHARDLDLAERILRRGDFAFFGMIGSHTKRKQFEHRLAARGFDPVAIARMKCPL EEEEECCCCCCHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCCCHHHHEEEECCC GVDGIVDKSPEIIAISAAAQLLQAVEANTAHAVQTA CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MHAWLTDLQQLLAHGDAVVLVTVARAEGSAPRDAGTKMIVTRDSARHTIGGGHLEWKAIE CCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCEEHHHHH SARQVLRDGMRAPNMRRLERFALGPSLGQCCGGAVVLAFERLDIADLGWVTSLAKRIAAG HHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHH QSVVRSVSFGPAPDAVMLSDPEPGVESADCLLWDGAGFDDSSALLTETIAPRDFPVVLFG HHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEEEE AGHVGAALVRVLATLPCHVHWVDERDAQFPDPGTLGAANVTIDANDAPVEAVDKAAPHTY CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEE FIVMTHNHARDLDLAERILRRGDFAFFGMIGSHTKRKQFEHRLAARGFDPVAIARMKCPL EEEEECCCCCCHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHHHHCCCCHHHHEEEECCC GVDGIVDKSPEIIAISAAAQLLQAVEANTAHAVQTA CCCCCCCCCCCEEEEHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA