| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186475466
Identifier: 186475466
GI number: 186475466
Start: 788739
End: 789221
Strand: Direct
Name: 186475466
Synonym: Bphy_0701
Alternate gene names: NA
Gene position: 788739-789221 (Clockwise)
Preceding gene: 186475465
Following gene: 186475467
Centisome position: 22.67
GC content: 66.05
Gene sequence:
>483_bases ATGAAGGCCACACCTGAGACCAGCGAAGGTTTTCCGCCCATCGAGACGATCCTGCCGCATCGCGGCACGATGCTGTTGCT CGACGGCGTGAGCGCATGCGGCGACGAGACGCTGACAGCCTACACGGCCGTGCGCGGCGATGCGTGGTACGCGGACGAAA GCGGCGCGATGCCCGCGTGGATCGGCATCGAGCTGATGGCGCAGGGCGTTGCCGCGCATATCGCGTTGCTGGCGATGCGG GCGGGTGGCCGCGCGCGTCCCGGCGTGCTGCTCGGCACGCGCAGCTACAAGGCGCACGCGAGCGCATTCGCGCGCGGCGC GCATCTGACCGTCAACGTTCAGGAAGTGCTGCGTGGCGACGAAGGCCACAGCGCCTACGAATGCGCGATCGATCACCTCG GTGCGCGTTACGCGGACGCCGTGATCAAGGTGTTTCAACCGGGCGACTTTCACACGTTCATCGAAGGGAGTATCAGTTCA TGA
Upstream 100 bases:
>100_bases CAATACGTAATGAGCAATTCGTTCGCGTTCGGCGGCAGCAACGTCAGCCTGATACTGGCGCGTTGACGCGCTCGAACGAC GACGCAACAAACATAACGAC
Downstream 100 bases:
>100_bases GCCGCCGAGTTCTCGTAACGGGCGCGAGCCGCGGCATTGGCCGCGCGATTGCCTATCAGCTGGCTGCCGACGGCTTCGCC GTGTCCGTGCATTGCCGCAC
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: 3-Hydroxylacyl-(Acyl Carrier Protein) Dehydratase; Beta-Hydroxyacyl-Acyl Carrier Protein-Dehydratase; Dehydratase; FabA-Like Domain-Containing Protein; Beta-Hydroxydecanoyl-ACP Dehydrase
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKATPETSEGFPPIETILPHRGTMLLLDGVSACGDETLTAYTAVRGDAWYADESGAMPAWIGIELMAQGVAAHIALLAMR AGGRARPGVLLGTRSYKAHASAFARGAHLTVNVQEVLRGDEGHSAYECAIDHLGARYADAVIKVFQPGDFHTFIEGSISS
Sequences:
>Translated_160_residues MKATPETSEGFPPIETILPHRGTMLLLDGVSACGDETLTAYTAVRGDAWYADESGAMPAWIGIELMAQGVAAHIALLAMR AGGRARPGVLLGTRSYKAHASAFARGAHLTVNVQEVLRGDEGHSAYECAIDHLGARYADAVIKVFQPGDFHTFIEGSISS >Mature_160_residues MKATPETSEGFPPIETILPHRGTMLLLDGVSACGDETLTAYTAVRGDAWYADESGAMPAWIGIELMAQGVAAHIALLAMR AGGRARPGVLLGTRSYKAHASAFARGAHLTVNVQEVLRGDEGHSAYECAIDHLGARYADAVIKVFQPGDFHTFIEGSISS
Specific function: Unknown
COG id: COG4706
COG function: function code I; Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16925; Mature: 16925
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATPETSEGFPPIETILPHRGTMLLLDGVSACGDETLTAYTAVRGDAWYADESGAMPAW CCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCCCHH IGIELMAQGVAAHIALLAMRAGGRARPGVLLGTRSYKAHASAFARGAHLTVNVQEVLRGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEHHHHHCCC EGHSAYECAIDHLGARYADAVIKVFQPGDFHTFIEGSISS CCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCC >Mature Secondary Structure MKATPETSEGFPPIETILPHRGTMLLLDGVSACGDETLTAYTAVRGDAWYADESGAMPAW CCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCEEEEEEECCCEEECCCCCCCCHH IGIELMAQGVAAHIALLAMRAGGRARPGVLLGTRSYKAHASAFARGAHLTVNVQEVLRGD HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEEHHHHHCCC EGHSAYECAIDHLGARYADAVIKVFQPGDFHTFIEGSISS CCCHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA