| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475460
Identifier: 186475460
GI number: 186475460
Start: 780666
End: 782447
Strand: Direct
Name: 186475460
Synonym: Bphy_0695
Alternate gene names: NA
Gene position: 780666-782447 (Clockwise)
Preceding gene: 186475459
Following gene: 186475461
Centisome position: 22.44
GC content: 65.43
Gene sequence:
>1782_bases ATGAGCGAAGCCAAGGCGATTTTCGCGCCGTGCGTCGTCATTCCGATCTACAACCATAAGGATGCGATCGGCGGCACGGT CGAGCGTCTTCTCGTGCACGCGTTGCCCATCTTCGTGATCGACGACGGTAGCGATGAAGCGACGCAAGCCGTGCTGGCGA AGCTCGCCTGCCAACACCGCGATCAGATGATGCTGTTGCGTCTGCCCGTCAACGGCGGCAAGGGCGCGGCCGTGATGGCA GGGCTGCGCGCGGCGAAACGCGCGGGCTACACGCATGCGTTGCAGATCGATGCCGATGGCCAGCACGAGGCGAGCGACGT GCCGCTCTTCCTCGCTGCTGCGCGCGCCGAGCCGGGCGCCGTGATTCTCGGCCGCCCTGTCTATGACGAGAGCGTGCCGA AGTCGCGCCTCTACGGCCGCTATCTGACGCACGTGTGGGTCTGGATCGAAACGCTGTCGTTCACCATCCGCGATTCGATG TGCGGCTTCCGCCTCTATCCGCTCGATGCCGCATGCGCGCTGATCGACAGCGTCGACTTGCCGATGCGTATGGACTTCGA CATCGAAATTCTGGTGCGCCTTTACTGGCGGCGTCTCGCGTTCCGCGCGATTCCGACGCGCGTCGTCTATGCGACGGATG GCGTGTCGCACTTCGACGTGCTGTGGGACAACGTGCGCATCAGCGCGAGCCATACGCGGCTCGTCTGCGGAATGCTGCTG CGTCTGCCGATGCTGCTCGCGCACAAGGTCATGCCGCGTCGATCCGCGGCGGCGCGTTCGAACGCCGATCGCGCGAACTG GTGGCGTGTGGCCGAACGCGGCAGCCGGCTCGGCATGACGCTGCTGGCGCTCAGCTGCAAGCTGTTCGGCATGCGCTTCA CCGCGCTGTGGCTGCACCCCGTGGTTGCGTATTTTCTGTTGACTGGGCGCGCTGCGCGCGCTGCGTCGCGCACCTACTTC GCGCATCTCGAACAGGCCGCGGCGGGCGAGCGCACGCCGCGGCCCGGCTGGCGCTCCGCTTACGGGCAGATGCTCGCGTT CGCGCAATCAGGTCTCGACAAGCTTGCCGCGTGGTCGGGCCGCATCGATTCGGACGATGTGGTCTTCGACGATCCCGCCG CCTTCGAAGCGCTCGTCGGCAGCGGCCGTGGCGCGCTCGTAATCGGCGCGCACCTGGGCAACCTAGAAATGACGCGCGCG CTCGCTGCGCACGGCGGCCACGCAAAGGTCACGGCCATTGTCTACACCGAGCACGCGAAGCGCTTCAACAGCGTGCTGTC GACGGCGAGCAGCGACTTCGCGAAGCGGCTCGTGCAGGTGAGCGACTTCGGACCCGAGACGTCGATGATGATGCAGGAGC GCATCGATGCGGGCGAACTGCTGGTGATCGTCGGCGACCGTGTGCCCGCGCGAGAATCGGGCCGCACGACGGAAGCCCGA TTCCTCGGCGCGACGGCACCGTTTGCGCAGGGGCCCTATGTGCTCGCGCATGCGCTCGGCTGCCCCGTGTATCTGTTTTT CTGTCTCAAAGAGCGCGACGACGCGGATGGCAAGCGCGAGCGCTACCACTTGTACTTCGAGCCGTTTGCGGAACGCATCG ACCTTCCGCGCCGCGAACGCGCGCAGCATATTGCGGCATGGGCGCAGCGCTATGCGTCGCGTCTCGAGCACTATTGCCGC AAGGCGCCGTATCAATGGTTCAATTTCTTCGATTTCTGGGCGCGTCCCCGAAAAGCGATAACGGGTGCAATCCCGAACGG AGACGCGAATGTCGGAACATGA
Upstream 100 bases:
>100_bases TCAAGCTCTCGCACGATGCCGCGCGCAGGCGCGTGCAATTCGCGTATCGCGTCGATGCACGCGACAGTTCGTCGGGCGTG ATCGTGTATCGGGAGCACAC
Downstream 100 bases:
>100_bases TCTGATCGACGATGCACACGCGCATGCTGCACGCGCCGCCGCGCCGCGCACGGTGGTGGTCGGCGGACGCAAGCTGTCGA TCGAAGAGGTCGTCGCGATT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Lipid A Biosynthesis Acyltransferase; Acyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Dolichyl-Phosphate Mannose Synthase; Family 2 Glycosyl Transferase; Transmembrane Family-2 Glycosyl Transferase; Acetyltransferase; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Glycosyl Transferase Family 2 And Acyltransferase Domains; Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase GT2 Family; Acyltransferase-Like Protein; Lipid A Biosynthesis Acyltransferase Family; Bacterial Lipid A Biosynthesis Acyltransferase Family; Oligosaccharide Acyltransferase Family Protein; B-Glycosyltransferase; Glycosyl Transferase Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Gt2J; Dolichyl-Phosphate Mannose Synthase-Like Protein; XanthomoNADin Biosynthesis Acyltransferase Protein; Glycosyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MSEAKAIFAPCVVIPIYNHKDAIGGTVERLLVHALPIFVIDDGSDEATQAVLAKLACQHRDQMMLLRLPVNGGKGAAVMA GLRAAKRAGYTHALQIDADGQHEASDVPLFLAAARAEPGAVILGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSM CGFRLYPLDAACALIDSVDLPMRMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLVCGMLL RLPMLLAHKVMPRRSAAARSNADRANWWRVAERGSRLGMTLLALSCKLFGMRFTALWLHPVVAYFLLTGRAARAASRTYF AHLEQAAAGERTPRPGWRSAYGQMLAFAQSGLDKLAAWSGRIDSDDVVFDDPAAFEALVGSGRGALVIGAHLGNLEMTRA LAAHGGHAKVTAIVYTEHAKRFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARESGRTTEAR FLGATAPFAQGPYVLAHALGCPVYLFFCLKERDDADGKRERYHLYFEPFAERIDLPRRERAQHIAAWAQRYASRLEHYCR KAPYQWFNFFDFWARPRKAITGAIPNGDANVGT
Sequences:
>Translated_593_residues MSEAKAIFAPCVVIPIYNHKDAIGGTVERLLVHALPIFVIDDGSDEATQAVLAKLACQHRDQMMLLRLPVNGGKGAAVMA GLRAAKRAGYTHALQIDADGQHEASDVPLFLAAARAEPGAVILGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSM CGFRLYPLDAACALIDSVDLPMRMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLVCGMLL RLPMLLAHKVMPRRSAAARSNADRANWWRVAERGSRLGMTLLALSCKLFGMRFTALWLHPVVAYFLLTGRAARAASRTYF AHLEQAAAGERTPRPGWRSAYGQMLAFAQSGLDKLAAWSGRIDSDDVVFDDPAAFEALVGSGRGALVIGAHLGNLEMTRA LAAHGGHAKVTAIVYTEHAKRFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARESGRTTEAR FLGATAPFAQGPYVLAHALGCPVYLFFCLKERDDADGKRERYHLYFEPFAERIDLPRRERAQHIAAWAQRYASRLEHYCR KAPYQWFNFFDFWARPRKAITGAIPNGDANVGT >Mature_592_residues SEAKAIFAPCVVIPIYNHKDAIGGTVERLLVHALPIFVIDDGSDEATQAVLAKLACQHRDQMMLLRLPVNGGKGAAVMAG LRAAKRAGYTHALQIDADGQHEASDVPLFLAAARAEPGAVILGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSMC GFRLYPLDAACALIDSVDLPMRMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLVCGMLLR LPMLLAHKVMPRRSAAARSNADRANWWRVAERGSRLGMTLLALSCKLFGMRFTALWLHPVVAYFLLTGRAARAASRTYFA HLEQAAAGERTPRPGWRSAYGQMLAFAQSGLDKLAAWSGRIDSDDVVFDDPAAFEALVGSGRGALVIGAHLGNLEMTRAL AAHGGHAKVTAIVYTEHAKRFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARESGRTTEARF LGATAPFAQGPYVLAHALGCPVYLFFCLKERDDADGKRERYHLYFEPFAERIDLPRRERAQHIAAWAQRYASRLEHYCRK APYQWFNFFDFWARPRKAITGAIPNGDANVGT
Specific function: Unknown
COG id: COG4261
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65880; Mature: 65748
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAKAIFAPCVVIPIYNHKDAIGGTVERLLVHALPIFVIDDGSDEATQAVLAKLACQHR CCCCCEEEECEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCC DQMMLLRLPVNGGKGAAVMAGLRAAKRAGYTHALQIDADGQHEASDVPLFLAAARAEPGA CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCE VILGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSMCGFRLYPLDAACALIDSVDL EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCC PMRMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLVCGMLL CEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEECCEEEECCHHHHHHHHHH RLPMLLAHKVMPRRSAAARSNADRANWWRVAERGSRLGMTLLALSCKLFGMRFTALWLHP HHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VVAYFLLTGRAARAASRTYFAHLEQAAAGERTPRPGWRSAYGQMLAFAQSGLDKLAAWSG HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RIDSDDVVFDDPAAFEALVGSGRGALVIGAHLGNLEMTRALAAHGGHAKVTAIVYTEHAK CCCCCCEEECCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEEHHHH RFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARESGRTTEAR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH FLGATAPFAQGPYVLAHALGCPVYLFFCLKERDDADGKRERYHLYFEPFAERIDLPRRER EEECCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCCCHHHH AQHIAAWAQRYASRLEHYCRKAPYQWFNFFDFWARPRKAITGAIPNGDANVGT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEAKAIFAPCVVIPIYNHKDAIGGTVERLLVHALPIFVIDDGSDEATQAVLAKLACQHR CCCCEEEECEEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCC DQMMLLRLPVNGGKGAAVMAGLRAAKRAGYTHALQIDADGQHEASDVPLFLAAARAEPGA CCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCE VILGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSMCGFRLYPLDAACALIDSVDL EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHCCCC PMRMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLVCGMLL CEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHEEECCEEEECCHHHHHHHHHH RLPMLLAHKVMPRRSAAARSNADRANWWRVAERGSRLGMTLLALSCKLFGMRFTALWLHP HHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH VVAYFLLTGRAARAASRTYFAHLEQAAAGERTPRPGWRSAYGQMLAFAQSGLDKLAAWSG HHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC RIDSDDVVFDDPAAFEALVGSGRGALVIGAHLGNLEMTRALAAHGGHAKVTAIVYTEHAK CCCCCCEEECCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEEEEEHHHH RFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARESGRTTEAR HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH FLGATAPFAQGPYVLAHALGCPVYLFFCLKERDDADGKRERYHLYFEPFAERIDLPRRER EEECCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHCCCCHHHH AQHIAAWAQRYASRLEHYCRKAPYQWFNFFDFWARPRKAITGAIPNGDANVGT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA