| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475453
Identifier: 186475453
GI number: 186475453
Start: 774937
End: 775509
Strand: Reverse
Name: 186475453
Synonym: Bphy_0688
Alternate gene names: NA
Gene position: 775509-774937 (Counterclockwise)
Preceding gene: 186475472
Following gene: 186475451
Centisome position: 22.29
GC content: 65.27
Gene sequence:
>573_bases GTGGAACAGGCTTTTCTGATCTCGACCGGCGCTGTCGCGCTCGCTGAAATCGGCGACAAGACACAACTGCTGTCGCTCGT CCTCGCAGCCCGCTATCGCAAGCCGCTGCCCATTATCGTCGGCGTGCTGGTCGCGACGCTCATCAATCACGCGGGCGCTG GCGCACTCGGCGCATGGCTCGGCTCGCTCGTCACGCCCACCGTGATGCGCTGGGCGCTGGCTGCGTCCTTCATCGGCATG GGGCTGTGGATTCTCGTACCCGACAAGCTTGACGACGCCGAAGCGAACACCAACCGCACGCACCTCGGCGTGTTCGGCGC AACCGTGGTCACCTTTTTTCTGGCGGAAATGGGCGACAAAACGCAAATTGCGACTGTTGCCCTCGCCGCGCGCTTCCATG ATTTCTTCGGCGTGGTCGCGGGCACGACGCTCGGCATGATGCTCGCGAACGTGCCCGCGATCCTGCTGGGCGACCGCTTC GCGCACAAGCTGCCGACCACGCTCGTCCACGGCATTGCCGCCGTCCTGTTCGTCGTGCTGGGCGCCATGGCGCTCTTGGG CGTCGGCGTCTGA
Upstream 100 bases:
>100_bases TCTGGCCTGGCGAGACCGATGATCCACTACCGCCGCTCTAGGGCCCGGCGTGTCGTGGGTCGTCGCTCGCACACATCTCG GCCCGAGGAATCTATCAAAC
Downstream 100 bases:
>100_bases TCGTTCGACATCGCGGCGATTCGACAATTGCGGCAGCCAATAGCAACGGCCGCATCGCTCACGCGATGTGGCCGTTTTTT TGCCCTCGACGCGGACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MEQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIVGVLVATLINHAGAGALGAWLGSLVTPTVMRWALAASFIGM GLWILVPDKLDDAEANTNRTHLGVFGATVVTFFLAEMGDKTQIATVALAARFHDFFGVVAGTTLGMMLANVPAILLGDRF AHKLPTTLVHGIAAVLFVVLGAMALLGVGV
Sequences:
>Translated_190_residues MEQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIVGVLVATLINHAGAGALGAWLGSLVTPTVMRWALAASFIGM GLWILVPDKLDDAEANTNRTHLGVFGATVVTFFLAEMGDKTQIATVALAARFHDFFGVVAGTTLGMMLANVPAILLGDRF AHKLPTTLVHGIAAVLFVVLGAMALLGVGV >Mature_190_residues MEQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIVGVLVATLINHAGAGALGAWLGSLVTPTVMRWALAASFIGM GLWILVPDKLDDAEANTNRTHLGVFGATVVTFFLAEMGDKTQIATVALAARFHDFFGVVAGTTLGMMLANVPAILLGDRF AHKLPTTLVHGIAAVLFVVLGAMALLGVGV
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19773; Mature: 19773
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIVGVLVATLINHAGAGALGAWL CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH GSLVTPTVMRWALAASFIGMGLWILVPDKLDDAEANTNRTHLGVFGATVVTFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC TQIATVALAARFHDFFGVVAGTTLGMMLANVPAILLGDRFAHKLPTTLVHGIAAVLFVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMALLGVGV HHHHHHHCCC >Mature Secondary Structure MEQAFLISTGAVALAEIGDKTQLLSLVLAARYRKPLPIIVGVLVATLINHAGAGALGAWL CCCCEEEECCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH GSLVTPTVMRWALAASFIGMGLWILVPDKLDDAEANTNRTHLGVFGATVVTFFLAEMGDK HHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC TQIATVALAARFHDFFGVVAGTTLGMMLANVPAILLGDRFAHKLPTTLVHGIAAVLFVVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAMALLGVGV HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA