| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is fbp1
Identifier: 186475450
GI number: 186475450
Start: 769912
End: 770928
Strand: Reverse
Name: fbp1
Synonym: Bphy_0685
Alternate gene names: 186475450
Gene position: 770928-769912 (Counterclockwise)
Preceding gene: 186475451
Following gene: 186475447
Centisome position: 22.16
GC content: 61.06
Gene sequence:
>1017_bases ATGTCTTTGCAACGTCGTACCACTCTCACGAAGTACCTGATCGAGCAGCAGCGCGAAAACAACAATCTGCCTGCCGATCT GCGCCTGCTGATCGAAGTCGTCGCGCGCGCGTGCAAGGCCATCAGCTATCACGTCAGCAAGGGCGCGCTCGGCGACGCGC TCGGCACGGCCGGCAGCGAGAACGTGCAGGGCGAAGTGCAGAAGAAGCTCGACATCCTGTCGAACGAAATCCTGCTCGAA GCCAACGAATGGGGCGGCAACCTCGCCGGCATGGCGTCGGAGGAGATGGAACAGTTCTTCCCGATCCCTGCGAATTATCC GAAAGGCGAATACCTGCTGGTGTTCGATCCGCTCGACGGCTCGTCGAACATCGACGTCAATGTGTCGATCGGCACGATCT TCTCGGTGCTGCGCTGCCCGGACGGCCAGCAGCCCACGGAACAATCGTTCCTTCAAAAGGGCACGCAGCAGGTCGCAGCC GGTTATGCCGTGTACGGCCCGCAAACGGTGCTCGTGCTGACAACGGGCAACGGCGTCAACTGCTTCACGCTCGATCGCGA ACTGGGCTCGTGGGTGCTCACGCAAAGCGACATGCGCATCCCCGTCGAAACGCGCGAATACGCGATCAACGCATCGAACC AGCGCCACTGGTATGAGCCCGTGCAGCAGTACATCGGCGAACTGAATGCGGGCAAGGACGGTCCGCGCCAGGCCGACTTC AACATGCGCTGGATCGCATCGATGGTCGCCGACGTGCACCGCATCCTGAACCGCGGCGGCATCTTCATGTACCCCGCCGA CAAGCGCGATCCGTCGAAGCCCGGCAAGCTGCGCCTGATGTACGAGGCGAACCCGATGTCGTTCATCGTCGAACAGGCGG GCGGCGCAGCAACCAACGGCGAGAAGCGCATTCTCGACATCCAGCCGAAGAGCCTGCACGAACGCGTCGCCGTATTCCTC GGCTCAAAAAACGAAGTTGATCGCGTGACCCGCTATCATCTCGAAAAGAAAAGTTGA
Upstream 100 bases:
>100_bases CCGCGGGGCCTACGGCAACACCCGGATTATTGAAAGTCACGGAACCCGAACATCGAAAGGTTAAAATCGGGGAATTCCCA AGCCTCTCCGGAGTACTGCA
Downstream 100 bases:
>100_bases GAAACCACTTGCCAAGCGGGAAAATAGGCTACATAATCCCACTTCTTCGTTGCTGACGAACAAAACGAACGCAACAACGG AGCCGGAATAGCTCAGACGG
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 1
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSLQRRTTLTKYLIEQQRENNNLPADLRLLIEVVARACKAISYHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLE ANEWGGNLAGMASEEMEQFFPIPANYPKGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQPTEQSFLQKGTQQVAA GYAVYGPQTVLVLTTGNGVNCFTLDRELGSWVLTQSDMRIPVETREYAINASNQRHWYEPVQQYIGELNAGKDGPRQADF NMRWIASMVADVHRILNRGGIFMYPADKRDPSKPGKLRLMYEANPMSFIVEQAGGAATNGEKRILDIQPKSLHERVAVFL GSKNEVDRVTRYHLEKKS
Sequences:
>Translated_338_residues MSLQRRTTLTKYLIEQQRENNNLPADLRLLIEVVARACKAISYHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLE ANEWGGNLAGMASEEMEQFFPIPANYPKGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQPTEQSFLQKGTQQVAA GYAVYGPQTVLVLTTGNGVNCFTLDRELGSWVLTQSDMRIPVETREYAINASNQRHWYEPVQQYIGELNAGKDGPRQADF NMRWIASMVADVHRILNRGGIFMYPADKRDPSKPGKLRLMYEANPMSFIVEQAGGAATNGEKRILDIQPKSLHERVAVFL GSKNEVDRVTRYHLEKKS >Mature_337_residues SLQRRTTLTKYLIEQQRENNNLPADLRLLIEVVARACKAISYHVSKGALGDALGTAGSENVQGEVQKKLDILSNEILLEA NEWGGNLAGMASEEMEQFFPIPANYPKGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGQQPTEQSFLQKGTQQVAAG YAVYGPQTVLVLTTGNGVNCFTLDRELGSWVLTQSDMRIPVETREYAINASNQRHWYEPVQQYIGELNAGKDGPRQADFN MRWIASMVADVHRILNRGGIFMYPADKRDPSKPGKLRLMYEANPMSFIVEQAGGAATNGEKRILDIQPKSLHERVAVFLG SKNEVDRVTRYHLEKKS
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=319, Percent_Identity=42.3197492163009, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI189083692, Length=319, Percent_Identity=41.692789968652, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI16579888, Length=319, Percent_Identity=41.692789968652, Blast_Score=244, Evalue=1e-64, Organism=Escherichia coli, GI1790679, Length=327, Percent_Identity=44.954128440367, Blast_Score=278, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17508131, Length=325, Percent_Identity=41.5384615384615, Blast_Score=257, Evalue=8e-69, Organism=Saccharomyces cerevisiae, GI6323409, Length=322, Percent_Identity=41.304347826087, Blast_Score=261, Evalue=1e-70, Organism=Drosophila melanogaster, GI45550998, Length=325, Percent_Identity=44.9230769230769, Blast_Score=263, Evalue=1e-70, Organism=Drosophila melanogaster, GI19921562, Length=325, Percent_Identity=44.9230769230769, Blast_Score=263, Evalue=2e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16A1_BURP8 (B2JEJ7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856920.1 - ProteinModelPortal: B2JEJ7 - SMR: B2JEJ7 - GeneID: 6244633 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0685 - HOGENOM: HBG731261 - OMA: HWEAPVQ - ProtClustDB: PRK09293 - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - PANTHER: PTHR11556 - PRINTS: PR00115
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 37623; Mature: 37492
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00124 FBPASE; PS00659 GLYCOSYL_HYDROL_F5
Important sites: BINDING 210-210 BINDING 276-276
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQRRTTLTKYLIEQQRENNNLPADLRLLIEVVARACKAISYHVSKGALGDALGTAGSE CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLEANEWGGNLAGMASEEMEQFFPIPANYPKGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQPTEQSFLQKGTQQVAAGYAVYGPQTVLVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE CFTLDRELGSWVLTQSDMRIPVETREYAINASNQRHWYEPVQQYIGELNAGKDGPRQADF EEEECCCCCCEEEECCCCCCCEEHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRDPSKPGKLRLMYEANPMSFIVEQAGGAATNG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC EKRILDIQPKSLHERVAVFLGSKNEVDRVTRYHLEKKS CCEEEECCCHHHHHHHHHEECCCCHHHHHHHHHHCCCC >Mature Secondary Structure SLQRRTTLTKYLIEQQRENNNLPADLRLLIEVVARACKAISYHVSKGALGDALGTAGSE CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCC NVQGEVQKKLDILSNEILLEANEWGGNLAGMASEEMEQFFPIPANYPKGEYLLVFDPLDG CCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCC SSNIDVNVSIGTIFSVLRCPDGQQPTEQSFLQKGTQQVAAGYAVYGPQTVLVLTTGNGVN CCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE CFTLDRELGSWVLTQSDMRIPVETREYAINASNQRHWYEPVQQYIGELNAGKDGPRQADF EEEECCCCCCEEEECCCCCCCEEHHHEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NMRWIASMVADVHRILNRGGIFMYPADKRDPSKPGKLRLMYEANPMSFIVEQAGGAATNG CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCC EKRILDIQPKSLHERVAVFLGSKNEVDRVTRYHLEKKS CCEEEECCCHHHHHHHHHEECCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA