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The map label for this gene is yaaD [H]

Identifier: 186475353

GI number: 186475353

Start: 664241

End: 664696

Strand: Direct

Name: yaaD [H]

Synonym: Bphy_0586

Alternate gene names: 186475353

Gene position: 664241-664696 (Clockwise)

Preceding gene: 186475348

Following gene: 186475354

Centisome position: 19.09

GC content: 60.75

Gene sequence:

>456_bases
ATGAGCATCATCGACATCTCTGAAGTGAAACCCGGTTCGCACGTCACGCTTCACTACCGGCTTTCGCTTGCCGATGGCGC
CGAGATCGTCAGCACCTTCAACGACAAGCCCGCCACGCTTCTGCTGGGCGCGGGCCAATTGGCGCCGCCGCTGGAAGACA
TTCTGCTGGGCCTGAAGGTAGGGCACCACTCGACCTTTCAGCTAGAGCCGGGGCAGGCATTTGGTCCGCGCAATGCGGAA
CTGATCCAGCGCGTGTCGCTCGCGACGCTGCGCGAAAACAGCATGATCGGCGAGGATTTTTCTCCCGGCGATCTCGTCGA
ATTCAACGCGCCGGGCGGCGGACGCTATGCCGGCGTGCTGAAGGAGGTTGGCGAAACCTCGGCTCTCTTCGATTTCAACC
ATCCGCTCGCCGGCCAGGCGCTGACGTTCGAAGTAAAAATCATCGGGATCCTGTAA

Upstream 100 bases:

>100_bases
GCCTTTGCGCACGTCAACCCCGGCTTCGCACGGGCCCGTCCTGCGCGCGACCCGCGCCGCCGCGTCCATGCGCCGTGCGC
CACGACCGAACGAGTACCGC

Downstream 100 bases:

>100_bases
ACATGAGCATCACGGACACGACTCTCGCCGAAGCTGAAATCCTGCTTGCGCAGCCGCGCGGATTTTGCGCCGGCGTCGAT
CGGGCGATCGAGATCGTCGA

Product: FKBP-type peptidylprolyl isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSIIDISEVKPGSHVTLHYRLSLADGAEIVSTFNDKPATLLLGAGQLAPPLEDILLGLKVGHHSTFQLEPGQAFGPRNAE
LIQRVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVLKEVGETSALFDFNHPLAGQALTFEVKIIGIL

Sequences:

>Translated_151_residues
MSIIDISEVKPGSHVTLHYRLSLADGAEIVSTFNDKPATLLLGAGQLAPPLEDILLGLKVGHHSTFQLEPGQAFGPRNAE
LIQRVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVLKEVGETSALFDFNHPLAGQALTFEVKIIGIL
>Mature_150_residues
SIIDISEVKPGSHVTLHYRLSLADGAEIVSTFNDKPATLLLGAGQLAPPLEDILLGLKVGHHSTFQLEPGQAFGPRNAEL
IQRVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVLKEVGETSALFDFNHPLAGQALTFEVKIIGIL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=143, Percent_Identity=41.2587412587413, Blast_Score=93, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16076; Mature: 15944

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIDISEVKPGSHVTLHYRLSLADGAEIVSTFNDKPATLLLGAGQLAPPLEDILLGLKV
CCEEECCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHEEC
GHHSTFQLEPGQAFGPRNAELIQRVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHH
KEVGETSALFDFNHPLAGQALTFEVKIIGIL
HHCCCCCEEEECCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
SIIDISEVKPGSHVTLHYRLSLADGAEIVSTFNDKPATLLLGAGQLAPPLEDILLGLKV
CEEECCCCCCCCEEEEEEEEEECCCHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHEEC
GHHSTFQLEPGQAFGPRNAELIQRVSLATLRENSMIGEDFSPGDLVEFNAPGGGRYAGVL
CCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHH
KEVGETSALFDFNHPLAGQALTFEVKIIGIL
HHCCCCCEEEECCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]