| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475331
Identifier: 186475331
GI number: 186475331
Start: 638164
End: 638406
Strand: Direct
Name: 186475331
Synonym: Bphy_0563
Alternate gene names: NA
Gene position: 638164-638406 (Clockwise)
Preceding gene: 186475322
Following gene: 186475333
Centisome position: 18.34
GC content: 55.14
Gene sequence:
>243_bases TTGACTGCGTTATCGCAACAAACTTATTCCGACGCTGCCGAAGCTGCTGCTGCCGGAGCTGCCTTCTTGTGCGACTTCTT GTGCGAAACCTTCTTCGTTGCCTTGTGCGACGAAGCTGCTGCTGCCGGAGCTGCCGAAGCTGCTTCCGGTGCCGAAGCTT GTGCGAATGCTGCCGTTGCGAAGAGACCAGCGACCAGAGCGGCGATCAGTTTGTTCATTTTGCGAATCCTCAGCTTTAGA TAA
Upstream 100 bases:
>100_bases TGAACCGCGAATGTTACGCGAGCGCGTCAAAAACAAAAAGGCAGAGAGCCTTGCGGCCATCTGCCTTTCAACGCCGTAAG AACGGCAAACCAGCTAGTTC
Downstream 100 bases:
>100_bases ATAACCAAATGACCCGGTTAGATTGAGTCATGTCGTTAAACGTGCCATCCACCTTTCGGTTGACATCCGCATTGAAGAAA ATTTTCTTTGCGGCTGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MTALSQQTYSDAAEAAAAGAAFLCDFLCETFFVALCDEAAAAGAAEAASGAEACANAAVAKRPATRAAISLFILRILSFR
Sequences:
>Translated_80_residues MTALSQQTYSDAAEAAAAGAAFLCDFLCETFFVALCDEAAAAGAAEAASGAEACANAAVAKRPATRAAISLFILRILSFR >Mature_79_residues TALSQQTYSDAAEAAAAGAAFLCDFLCETFFVALCDEAAAAGAAEAASGAEACANAAVAKRPATRAAISLFILRILSFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8079; Mature: 7948
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALSQQTYSDAAEAAAAGAAFLCDFLCETFFVALCDEAAAAGAAEAASGAEACANAAVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRPATRAAISLFILRILSFR HCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TALSQQTYSDAAEAAAAGAAFLCDFLCETFFVALCDEAAAAGAAEAASGAEACANAAVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH KRPATRAAISLFILRILSFR HCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA