| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is mviN [H]
Identifier: 186475300
GI number: 186475300
Start: 603187
End: 604737
Strand: Direct
Name: mviN [H]
Synonym: Bphy_0532
Alternate gene names: 186475300
Gene position: 603187-604737 (Clockwise)
Preceding gene: 186475298
Following gene: 186475301
Centisome position: 17.34
GC content: 63.96
Gene sequence:
>1551_bases ATGAATCTATTCCGAGCCCTGCTGACGGTCAGCGGCTTCACGCTGCTTTCGCGCGTGACCGGACTGGCCCGCGAGACCCT GATTGCCCGCGCTTTCGGCGCGAGCCAGTACACCGACGCGTTTTACGTCGCCTTCCGTATTCCGAACCTGCTGCGCCGTA TTTCCGCCGAAGGCGCGTTTTCGCAGGCGTTCGTGCCGATCCTCGCCGAGTTCAAGAACCAGCAAGGTCACGACGCAACG AAGGCGCTCGTCGATGCCACCTCCACCGTGCTTGCCTGGGCGTTGGCCATCATGTCGTTGCTGGGCGTGGTGGGCGCGTC GTGGGTGGTGCTGGTGGTCGCCTCCGGCCTGCGCGGCGACGGACAGGCGTTCACGCTCGCGGTGTCGATGACGCGGATCA TGTTCCCGTACATCGTGTTCATATCGCTGACGTCGCTGGCGTCGGGCGTGTTGAACACCTACAAGCACTTCTCGCTGCCC GCGTTCGCGCCCGTGCTGCTGAACGTCTCGTTCATCATCGCGGCCGTGTTCGTCGCGCCGCTCATGAAGGTACCCGTGTT CGCGCTCGCGTGGGCGGTGATCGCTGGCGGCATCGCGCAGTTCATCGTGCAGCTGCCGGGCTTGAAGAAGATCGACATGA TCCCGCGCATCGGGCTCAATCCGCTGAAGGCGCTCGCCCACCGCGGCGTCAAGCGCGTGCTCGCGAAGATGGTCCCGGCG ATGTTCGCGGTCTCGGTCGCGCAGATCAGCCTGATCATCAACACGAATATTGCGTCGCACATCGGGCCGGGCGCGGTGTC GTGGATCAACTACGCCGACCGCCTGATGGAATTCCCGACGGCGCTGCTTGGCGTCGCGCTAGGCACGATCCTGTTGCCGA GCCTGTCCAAGGCGCACGTCGACGCCGATGCGCACGAGTATTCGTCGCTGCTCGACTGGGGGCTGCGCGTGACGTTCCTG CTCGCCGCGCCGAGCGCCGTTGCGCTGTTCTTCTTCGCCGAGCCGCTCACGGCGACGCTGTTCCACTACGGCAAGTTCGA CGGCAATGCCGTCGTGATGGTGGGGCGCGCGTTGGCCGCGTACGGCGTCGGCCTGATCGGGCTCATCCTGATCAAGATTC TCGCGCCCGGCTTCTACGCAAAGCAGGACATCAAGACGCCCGTGAAGATTGGTGTGTTCGTGCTGGTCGTTACGCAGTTG AGCAACTACGTGTTCGTACCCGTCTTCGCGCATGCGGGGTTGACGCTGTCGGTGGGACTCGGCGCGTGTGTGAACGCGCT GTGCCTGTTCATCGGCTTGCGGCGGCGCGGCATCTATATGCCGTCGGCGGGCTGGTCGGTGTTCTTCGTGCAACTGGTCG GCGCGTGTCTCGTGCTGGCGGGCGTGATGCACTGGTTCGCGATCAACTTCGACTGGATCGGCATGCATGCCGAGCCGTTG CGGCGCATGGCGCTGCTCGCGGCGTGCCTTGTGCTGTTTGCGGCGTTATATTTCGGTATGCTGTGGCTGATGGGCTTCAA GTACGCGTATTTCAGAAGGCGAGTGAAGTGA
Upstream 100 bases:
>100_bases AACGTCTTTGCAGCAAATCGGTCCCAAAGCCTTCGAATTGCCACGAATCGTGCCCTCCACATACTGACCGCCCCGGACGC ACCCGTATAATAAGCGCCCC
Downstream 100 bases:
>100_bases TCACGACGACCCGGGTTCTCGACTATTTCAGCGCGCTCGTCGCCGAGGACGACGGGCTTCCGCTCACGGAAGCGGCGCTG TCGCTTGCGCAGGACGCCTA
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAIMSLLGVVGASWVVLVVASGLRGDGQAFTLAVSMTRIMFPYIVFISLTSLASGVLNTYKHFSLP AFAPVLLNVSFIIAAVFVAPLMKVPVFALAWAVIAGGIAQFIVQLPGLKKIDMIPRIGLNPLKALAHRGVKRVLAKMVPA MFAVSVAQISLIINTNIASHIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADAHEYSSLLDWGLRVTFL LAAPSAVALFFFAEPLTATLFHYGKFDGNAVVMVGRALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLVVTQL SNYVFVPVFAHAGLTLSVGLGACVNALCLFIGLRRRGIYMPSAGWSVFFVQLVGACLVLAGVMHWFAINFDWIGMHAEPL RRMALLAACLVLFAALYFGMLWLMGFKYAYFRRRVK
Sequences:
>Translated_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAIMSLLGVVGASWVVLVVASGLRGDGQAFTLAVSMTRIMFPYIVFISLTSLASGVLNTYKHFSLP AFAPVLLNVSFIIAAVFVAPLMKVPVFALAWAVIAGGIAQFIVQLPGLKKIDMIPRIGLNPLKALAHRGVKRVLAKMVPA MFAVSVAQISLIINTNIASHIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADAHEYSSLLDWGLRVTFL LAAPSAVALFFFAEPLTATLFHYGKFDGNAVVMVGRALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLVVTQL SNYVFVPVFAHAGLTLSVGLGACVNALCLFIGLRRRGIYMPSAGWSVFFVQLVGACLVLAGVMHWFAINFDWIGMHAEPL RRMALLAACLVLFAALYFGMLWLMGFKYAYFRRRVK >Mature_516_residues MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAFSQAFVPILAEFKNQQGHDAT KALVDATSTVLAWALAIMSLLGVVGASWVVLVVASGLRGDGQAFTLAVSMTRIMFPYIVFISLTSLASGVLNTYKHFSLP AFAPVLLNVSFIIAAVFVAPLMKVPVFALAWAVIAGGIAQFIVQLPGLKKIDMIPRIGLNPLKALAHRGVKRVLAKMVPA MFAVSVAQISLIINTNIASHIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHVDADAHEYSSLLDWGLRVTFL LAAPSAVALFFFAEPLTATLFHYGKFDGNAVVMVGRALAAYGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLVVTQL SNYVFVPVFAHAGLTLSVGLGACVNALCLFIGLRRRGIYMPSAGWSVFFVQLVGACLVLAGVMHWFAINFDWIGMHAEPL RRMALLAACLVLFAALYFGMLWLMGFKYAYFRRRVK
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=517, Percent_Identity=52.8046421663443, Blast_Score=497, Evalue=1e-142,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55710; Mature: 55710
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH SQAFVPILAEFKNQQGHDATKALVDATSTVLAWALAIMSLLGVVGASWVVLVVASGLRGD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GQAFTLAVSMTRIMFPYIVFISLTSLASGVLNTYKHFSLPAFAPVLLNVSFIIAAVFVAP CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LMKVPVFALAWAVIAGGIAQFIVQLPGLKKIDMIPRIGLNPLKALAHRGVKRVLAKMVPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MFAVSVAQISLIINTNIASHIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC DADAHEYSSLLDWGLRVTFLLAAPSAVALFFFAEPLTATLFHYGKFDGNAVVMVGRALAA CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH YGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLVVTQLSNYVFVPVFAHAGLTLSVGL HHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEHHH GACVNALCLFIGLRRRGIYMPSAGWSVFFVQLVGACLVLAGVMHWFAINFDWIGMHAEPL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHH RRMALLAACLVLFAALYFGMLWLMGFKYAYFRRRVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLFRALLTVSGFTLLSRVTGLARETLIARAFGASQYTDAFYVAFRIPNLLRRISAEGAF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH SQAFVPILAEFKNQQGHDATKALVDATSTVLAWALAIMSLLGVVGASWVVLVVASGLRGD HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GQAFTLAVSMTRIMFPYIVFISLTSLASGVLNTYKHFSLPAFAPVLLNVSFIIAAVFVAP CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH LMKVPVFALAWAVIAGGIAQFIVQLPGLKKIDMIPRIGLNPLKALAHRGVKRVLAKMVPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MFAVSVAQISLIINTNIASHIGPGAVSWINYADRLMEFPTALLGVALGTILLPSLSKAHV HHHHHHHHHHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC DADAHEYSSLLDWGLRVTFLLAAPSAVALFFFAEPLTATLFHYGKFDGNAVVMVGRALAA CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHH YGVGLIGLILIKILAPGFYAKQDIKTPVKIGVFVLVVTQLSNYVFVPVFAHAGLTLSVGL HHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEEHHH GACVNALCLFIGLRRRGIYMPSAGWSVFFVQLVGACLVLAGVMHWFAINFDWIGMHAEPL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHH RRMALLAACLVLFAALYFGMLWLMGFKYAYFRRRVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8200538; 11677609 [H]